EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015001142 (Gene tree)
Gene ID: 108928002
Gene Symbol: rpp40
Alias: Rpp40|rpp40l|zgc:86704
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5479 bases
Position: chrKV410882.1:2181649-2187127
Accession: 108928002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001635	Ribonuc_P_40	PF08584.11	7e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001673	-	2164	XM_018741722	ENSSFOP00015001635	444 (aa)	XP_018597238	-

Gene Model

Click here to download ENSSFOG00015001142's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03008	Ribosome biogenesis in eukaryotes	KEGG
sfm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001142's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015001142	rpp40	81	48.760	ENSG00000124787	RPP40	98	50.167	Homo_sapiens
ENSSFOG00015001142	rpp40	72	39.252	ENSAPOG00000008660	rpp40	92	39.252	Acanthochromis_polyacanthus
ENSSFOG00015001142	rpp40	81	48.485	ENSAMEG00000012938	RPP40	99	48.485	Ailuropoda_melanoleuca
ENSSFOG00015001142	rpp40	80	43.417	ENSACIG00000003617	rpp40	99	43.417	Amphilophus_citrinellus
ENSSFOG00015001142	rpp40	81	46.667	ENSAOCG00000011846	rpp40	100	46.667	Amphiprion_ocellaris
ENSSFOG00015001142	rpp40	81	46.667	ENSAPEG00000001322	rpp40	100	46.667	Amphiprion_percula
ENSSFOG00015001142	rpp40	81	46.133	ENSATEG00000006584	rpp40	100	46.961	Anabas_testudineus
ENSSFOG00015001142	rpp40	68	51.987	ENSAPLG00000005691	RPP40	99	51.987	Anas_platyrhynchos
ENSSFOG00015001142	rpp40	80	52.101	ENSACAG00000006550	RPP40	87	52.101	Anolis_carolinensis
ENSSFOG00015001142	rpp40	81	47.107	ENSANAG00000029246	RPP40	99	47.107	Aotus_nancymaae
ENSSFOG00015001142	rpp40	79	49.148	ENSACLG00000015883	rpp40	96	49.148	Astatotilapia_calliptera
ENSSFOG00015001142	rpp40	81	56.787	ENSAMXG00000001755	rpp40	100	56.787	Astyanax_mexicanus
ENSSFOG00015001142	rpp40	81	50.413	ENSBTAG00000003332	RPP40	99	50.413	Bos_taurus
ENSSFOG00015001142	rpp40	81	47.934	ENSCJAG00000021373	RPP40	99	47.934	Callithrix_jacchus
ENSSFOG00015001142	rpp40	81	49.311	ENSCAFG00000009435	RPP40	99	49.311	Canis_familiaris
ENSSFOG00015001142	rpp40	81	49.311	ENSCAFG00020013380	RPP40	99	49.311	Canis_lupus_dingo
ENSSFOG00015001142	rpp40	81	50.689	ENSCHIG00000016849	RPP40	99	51.815	Capra_hircus
ENSSFOG00015001142	rpp40	81	49.311	ENSTSYG00000032857	RPP40	98	51.171	Carlito_syrichta
ENSSFOG00015001142	rpp40	75	44.478	ENSCAPG00000004957	RPP40	100	44.478	Cavia_aperea
ENSSFOG00015001142	rpp40	81	50.413	ENSCPOG00000005855	RPP40	99	50.413	Cavia_porcellus
ENSSFOG00015001142	rpp40	81	48.209	ENSCCAG00000019809	RPP40	99	48.209	Cebus_capucinus
ENSSFOG00015001142	rpp40	81	48.209	ENSCATG00000038787	RPP40	99	48.209	Cercocebus_atys
ENSSFOG00015001142	rpp40	81	48.760	ENSCLAG00000003235	RPP40	99	48.760	Chinchilla_lanigera
ENSSFOG00015001142	rpp40	81	48.209	ENSCSAG00000007307	RPP40	99	48.209	Chlorocebus_sabaeus
ENSSFOG00015001142	rpp40	80	51.117	ENSCPBG00000009003	RPP40	98	51.117	Chrysemys_picta_bellii
ENSSFOG00015001142	rpp40	81	48.209	ENSCANG00000033965	RPP40	99	48.209	Colobus_angolensis_palliatus
ENSSFOG00015001142	rpp40	81	49.036	ENSCGRG00001018328	Rpp40	99	49.036	Cricetulus_griseus_chok1gshd
ENSSFOG00015001142	rpp40	81	49.036	ENSCGRG00000011344	Rpp40	99	49.036	Cricetulus_griseus_crigri
ENSSFOG00015001142	rpp40	81	40.997	ENSCSEG00000015006	-	100	41.551	Cynoglossus_semilaevis
ENSSFOG00015001142	rpp40	60	43.333	ENSCVAG00000012169	rpp40	100	43.704	Cyprinodon_variegatus
ENSSFOG00015001142	rpp40	81	60.388	ENSDARG00000017605	rpp40	100	60.388	Danio_rerio
ENSSFOG00015001142	rpp40	65	46.918	ENSDNOG00000048136	RPP40	98	46.918	Dasypus_novemcinctus
ENSSFOG00015001142	rpp40	80	48.603	ENSDORG00000029944	-	98	48.603	Dipodomys_ordii
ENSSFOG00015001142	rpp40	80	39.071	ENSDORG00000011196	-	98	39.071	Dipodomys_ordii
ENSSFOG00015001142	rpp40	81	38.843	ENSETEG00000007458	RPP40	99	38.843	Echinops_telfairi
ENSSFOG00015001142	rpp40	80	44.663	ENSEBUG00000000386	rpp40	99	44.720	Eptatretus_burgeri
ENSSFOG00015001142	rpp40	82	48.087	ENSEASG00005012116	RPP40	80	48.087	Equus_asinus_asinus
ENSSFOG00015001142	rpp40	82	48.361	ENSECAG00000017247	RPP40	80	48.361	Equus_caballus
ENSSFOG00015001142	rpp40	66	38.721	ENSEEUG00000012087	RPP40	99	38.721	Erinaceus_europaeus
ENSSFOG00015001142	rpp40	81	63.435	ENSELUG00000017004	rpp40	100	63.435	Esox_lucius
ENSSFOG00015001142	rpp40	81	49.036	ENSFCAG00000009249	RPP40	99	49.036	Felis_catus
ENSSFOG00015001142	rpp40	70	51.385	ENSFALG00000013166	RPP40	99	51.385	Ficedula_albicollis
ENSSFOG00015001142	rpp40	81	49.311	ENSFDAG00000013001	-	99	49.311	Fukomys_damarensis
ENSSFOG00015001142	rpp40	65	41.781	ENSFDAG00000000265	-	99	41.781	Fukomys_damarensis
ENSSFOG00015001142	rpp40	81	49.722	ENSFHEG00000021429	rpp40	89	49.722	Fundulus_heteroclitus
ENSSFOG00015001142	rpp40	72	43.168	ENSGMOG00000018653	rpp40	100	43.168	Gadus_morhua
ENSSFOG00015001142	rpp40	82	50.954	ENSGALG00000036074	RPP40	99	50.954	Gallus_gallus
ENSSFOG00015001142	rpp40	68	38.000	ENSGAFG00000004189	-	99	38.000	Gambusia_affinis
ENSSFOG00015001142	rpp40	81	48.333	ENSGACG00000002472	rpp40	100	48.333	Gasterosteus_aculeatus
ENSSFOG00015001142	rpp40	80	51.955	ENSGAGG00000012918	RPP40	98	51.955	Gopherus_agassizii
ENSSFOG00015001142	rpp40	81	49.036	ENSGGOG00000013764	RPP40	99	49.036	Gorilla_gorilla
ENSSFOG00015001142	rpp40	74	46.224	ENSHBUG00000009378	rpp40	95	46.224	Haplochromis_burtoni
ENSSFOG00015001142	rpp40	81	50.138	ENSHGLG00000004871	RPP40	99	50.138	Heterocephalus_glaber_female
ENSSFOG00015001142	rpp40	81	50.138	ENSHGLG00100002080	RPP40	99	50.138	Heterocephalus_glaber_male
ENSSFOG00015001142	rpp40	79	39.660	ENSHCOG00000013264	-	94	39.660	Hippocampus_comes
ENSSFOG00015001142	rpp40	81	59.116	ENSIPUG00000008951	RPP40	100	59.116	Ictalurus_punctatus
ENSSFOG00015001142	rpp40	81	48.485	ENSSTOG00000011199	RPP40	99	48.485	Ictidomys_tridecemlineatus
ENSSFOG00015001142	rpp40	80	48.603	ENSJJAG00000020629	Rpp40	98	48.603	Jaculus_jaculus
ENSSFOG00015001142	rpp40	81	45.278	ENSKMAG00000019358	rpp40	100	45.278	Kryptolebias_marmoratus
ENSSFOG00015001142	rpp40	81	50.000	ENSLBEG00000022724	rpp40	100	50.000	Labrus_bergylta
ENSSFOG00015001142	rpp40	81	54.696	ENSLACG00000014848	RPP40	100	54.696	Latimeria_chalumnae
ENSSFOG00015001142	rpp40	81	60.055	ENSLOCG00000011650	rpp40	99	60.055	Lepisosteus_oculatus
ENSSFOG00015001142	rpp40	67	52.174	ENSLAFG00000007530	RPP40	98	52.174	Loxodonta_africana
ENSSFOG00015001142	rpp40	81	47.658	ENSMFAG00000043100	RPP40	99	47.658	Macaca_fascicularis
ENSSFOG00015001142	rpp40	81	47.934	ENSMMUG00000004966	RPP40	99	47.934	Macaca_mulatta
ENSSFOG00015001142	rpp40	81	47.934	ENSMNEG00000041986	RPP40	98	49.164	Macaca_nemestrina
ENSSFOG00015001142	rpp40	80	43.296	ENSMLEG00000040851	RPP40	100	43.296	Mandrillus_leucophaeus
ENSSFOG00015001142	rpp40	81	48.333	ENSMAMG00000019551	rpp40	99	48.333	Mastacembelus_armatus
ENSSFOG00015001142	rpp40	81	49.441	ENSMZEG00005019475	rpp40	99	49.441	Maylandia_zebra
ENSSFOG00015001142	rpp40	72	54.601	ENSMGAG00000004009	RPP40	89	54.601	Meleagris_gallopavo
ENSSFOG00015001142	rpp40	81	48.760	ENSMAUG00000010268	Rpp40	99	48.760	Mesocricetus_auratus
ENSSFOG00015001142	rpp40	82	48.641	ENSMICG00000003297	RPP40	99	45.730	Microcebus_murinus
ENSSFOG00015001142	rpp40	81	48.760	ENSMOCG00000000305	Rpp40	99	48.760	Microtus_ochrogaster
ENSSFOG00015001142	rpp40	81	42.222	ENSMMOG00000020591	-	100	42.222	Mola_mola
ENSSFOG00015001142	rpp40	81	49.036	ENSMODG00000009826	RPP40	99	49.036	Monodelphis_domestica
ENSSFOG00015001142	rpp40	81	50.000	ENSMALG00000020133	rpp40	100	50.000	Monopterus_albus
ENSSFOG00015001142	rpp40	81	49.587	MGP_CAROLIEiJ_G0018429	Rpp40	99	49.587	Mus_caroli
ENSSFOG00015001142	rpp40	81	49.862	ENSMUSG00000021418	Rpp40	99	49.862	Mus_musculus
ENSSFOG00015001142	rpp40	81	49.587	MGP_PahariEiJ_G0019497	Rpp40	99	49.587	Mus_pahari
ENSSFOG00015001142	rpp40	81	49.862	MGP_SPRETEiJ_G0019309	Rpp40	99	49.862	Mus_spretus
ENSSFOG00015001142	rpp40	82	48.634	ENSMPUG00000000530	RPP40	94	48.634	Mustela_putorius_furo
ENSSFOG00015001142	rpp40	81	49.311	ENSMLUG00000000501	RPP40	99	49.311	Myotis_lucifugus
ENSSFOG00015001142	rpp40	76	44.575	ENSNGAG00000022529	-	98	44.575	Nannospalax_galili
ENSSFOG00015001142	rpp40	80	49.162	ENSNGAG00000023955	-	98	49.162	Nannospalax_galili
ENSSFOG00015001142	rpp40	72	44.410	ENSNBRG00000017465	rpp40	86	44.785	Neolamprologus_brichardi
ENSSFOG00015001142	rpp40	81	49.036	ENSNLEG00000034397	RPP40	99	49.036	Nomascus_leucogenys
ENSSFOG00015001142	rpp40	80	44.693	ENSMEUG00000005300	RPP40	98	44.693	Notamacropus_eugenii
ENSSFOG00015001142	rpp40	72	45.201	ENSODEG00000006170	-	100	45.201	Octodon_degus
ENSSFOG00015001142	rpp40	81	49.311	ENSODEG00000007255	-	99	49.311	Octodon_degus
ENSSFOG00015001142	rpp40	81	46.281	ENSODEG00000018153	-	99	46.281	Octodon_degus
ENSSFOG00015001142	rpp40	81	48.603	ENSONIG00000014016	rpp40	99	48.603	Oreochromis_niloticus
ENSSFOG00015001142	rpp40	67	52.333	ENSOANG00000001200	RPP40	98	52.333	Ornithorhynchus_anatinus
ENSSFOG00015001142	rpp40	81	47.091	ENSOCUG00000000354	RPP40	99	47.091	Oryctolagus_cuniculus
ENSSFOG00015001142	rpp40	80	47.059	ENSORLG00000008242	-	99	47.059	Oryzias_latipes
ENSSFOG00015001142	rpp40	83	46.070	ENSORLG00020013745	-	93	46.070	Oryzias_latipes_hni
ENSSFOG00015001142	rpp40	80	47.339	ENSORLG00015000887	-	99	47.339	Oryzias_latipes_hsok
ENSSFOG00015001142	rpp40	80	48.459	ENSOMEG00000002747	rpp40	99	48.459	Oryzias_melastigma
ENSSFOG00015001142	rpp40	81	47.934	ENSOGAG00000006055	RPP40	99	47.934	Otolemur_garnettii
ENSSFOG00015001142	rpp40	72	50.000	ENSOARG00000018783	RPP40	99	51.485	Ovis_aries
ENSSFOG00015001142	rpp40	81	48.760	ENSPPAG00000023703	RPP40	99	48.760	Pan_paniscus
ENSSFOG00015001142	rpp40	81	48.760	ENSPPRG00000005612	RPP40	99	48.760	Panthera_pardus
ENSSFOG00015001142	rpp40	81	45.856	ENSPTIG00000018847	RPP40	99	45.856	Panthera_tigris_altaica
ENSSFOG00015001142	rpp40	81	48.209	ENSPTRG00000017690	RPP40	99	48.209	Pan_troglodytes
ENSSFOG00015001142	rpp40	81	48.209	ENSPANG00000017865	RPP40	99	48.209	Papio_anubis
ENSSFOG00015001142	rpp40	81	72.778	ENSPKIG00000006311	rpp40	100	72.778	Paramormyrops_kingsleyae
ENSSFOG00015001142	rpp40	50	51.570	ENSPSIG00000007854	RPP40	100	51.570	Pelodiscus_sinensis
ENSSFOG00015001142	rpp40	76	42.899	ENSPEMG00000020809	Rpp40	91	42.899	Peromyscus_maniculatus_bairdii
ENSSFOG00015001142	rpp40	61	47.636	ENSPMAG00000008412	rpp40	99	47.636	Petromyzon_marinus
ENSSFOG00015001142	rpp40	80	49.721	ENSPCIG00000010682	RPP40	98	49.721	Phascolarctos_cinereus
ENSSFOG00015001142	rpp40	81	43.370	ENSPFOG00000011460	rpp40	99	43.370	Poecilia_formosa
ENSSFOG00015001142	rpp40	81	43.056	ENSPLAG00000001334	rpp40	100	43.056	Poecilia_latipinna
ENSSFOG00015001142	rpp40	81	44.167	ENSPMEG00000007721	rpp40	100	44.167	Poecilia_mexicana
ENSSFOG00015001142	rpp40	81	44.722	ENSPREG00000009215	rpp40	100	44.722	Poecilia_reticulata
ENSSFOG00015001142	rpp40	81	48.760	ENSPPYG00000016194	RPP40	99	48.760	Pongo_abelii
ENSSFOG00015001142	rpp40	81	48.485	ENSPCOG00000003907	RPP40	99	48.485	Propithecus_coquereli
ENSSFOG00015001142	rpp40	81	49.036	ENSPVAG00000011325	RPP40	99	49.036	Pteropus_vampyrus
ENSSFOG00015001142	rpp40	68	46.333	ENSPNYG00000004432	rpp40	99	46.333	Pundamilia_nyererei
ENSSFOG00015001142	rpp40	81	56.906	ENSPNAG00000019125	rpp40	100	56.906	Pygocentrus_nattereri
ENSSFOG00015001142	rpp40	81	49.587	ENSRNOG00000016226	Rpp40	98	50.836	Rattus_norvegicus
ENSSFOG00015001142	rpp40	81	48.209	ENSRBIG00000035800	RPP40	98	49.498	Rhinopithecus_bieti
ENSSFOG00015001142	rpp40	81	48.209	ENSRROG00000039116	RPP40	99	48.209	Rhinopithecus_roxellana
ENSSFOG00015001142	rpp40	81	47.383	ENSSBOG00000020297	RPP40	99	47.383	Saimiri_boliviensis_boliviensis
ENSSFOG00015001142	rpp40	62	52.536	ENSSHAG00000002102	RPP40	99	52.536	Sarcophilus_harrisii
ENSSFOG00015001142	rpp40	81	49.167	ENSSDUG00000007202	rpp40	100	49.167	Seriola_dumerili
ENSSFOG00015001142	rpp40	81	48.889	ENSSLDG00000017563	rpp40	100	48.889	Seriola_lalandi_dorsalis
ENSSFOG00015001142	rpp40	82	50.549	ENSSPUG00000017487	-	99	50.549	Sphenodon_punctatus
ENSSFOG00015001142	rpp40	66	49.662	ENSSPUG00000018950	-	100	49.662	Sphenodon_punctatus
ENSSFOG00015001142	rpp40	81	48.611	ENSSPAG00000022716	rpp40	100	48.611	Stegastes_partitus
ENSSFOG00015001142	rpp40	81	48.760	ENSSSCG00000000998	RPP40	99	49.669	Sus_scrofa
ENSSFOG00015001142	rpp40	80	52.089	ENSTGUG00000002258	-	100	52.089	Taeniopygia_guttata
ENSSFOG00015001142	rpp40	79	48.011	ENSTRUG00000003755	rpp40	98	48.011	Takifugu_rubripes
ENSSFOG00015001142	rpp40	81	46.944	ENSTNIG00000003077	rpp40	100	46.944	Tetraodon_nigroviridis
ENSSFOG00015001142	rpp40	56	34.661	ENSTBEG00000014467	-	73	34.661	Tupaia_belangeri
ENSSFOG00015001142	rpp40	81	46.281	ENSTTRG00000007319	RPP40	100	46.281	Tursiops_truncatus
ENSSFOG00015001142	rpp40	81	49.036	ENSUAMG00000002159	RPP40	98	50.836	Ursus_americanus
ENSSFOG00015001142	rpp40	82	48.370	ENSUMAG00000018639	RPP40	95	48.370	Ursus_maritimus
ENSSFOG00015001142	rpp40	57	37.743	ENSVPAG00000004652	-	89	37.743	Vicugna_pacos
ENSSFOG00015001142	rpp40	81	49.587	ENSVVUG00000005451	RPP40	99	49.587	Vulpes_vulpes
ENSSFOG00015001142	rpp40	81	49.451	ENSXETG00000017617	rpp40	100	49.451	Xenopus_tropicalis
ENSSFOG00015001142	rpp40	81	36.111	ENSXMAG00000024940	rpp40	99	36.111	Xiphophorus_maculatus