EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSFOG00015001227 (Gene tree)
Gene ID
108919901
Gene Symbol
rexo1
Alias
fb77b11|si:dkey-45m5.5|wu:fb77b11
Full Name
paired mesoderm homeobox protein 2A-like
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Minus strand
Length
26432 bases
Position
chrKV411278.1:100357-126788
Accession
108919901
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015001841RNase_TPF00929.242.6e-0611
ENSSFOP00015001828RNase_TPF00929.242.6e-0611
ENSSFOP00015001808RNase_TPF00929.242.6e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015001848-3999-ENSSFOP000150018081268 (aa)--
ENSSFOT00015001868-4008XM_018728278ENSSFOP000150018281271 (aa)XP_018583794A0A1W4XW71
ENSSFOT00015001881-7686XM_018728279ENSSFOP000150018411254 (aa)XP_018583795A0A1W4XWR0
ENSSFOT00015001837-2836XM_018728282ENSSFOP00015001797280 (aa)XP_018583798A0A1W4Y6E1
Gene Model
Click here to download ENSSFOG00015001227's gene model file
Pathways
Pathway IDPathway NameSource
sfm03008Ribosome biogenesis in eukaryotesKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001227's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015001227rexo19956.798ENSAMXG00000016463rexo19957.564Astyanax_mexicanus
ENSSFOG00015001227rexo19953.429ENSCSEG00000016683rexo19953.765Cynoglossus_semilaevis
ENSSFOG00015001227rexo19957.910ENSELUG00000014078rexo19957.988Esox_lucius
ENSSFOG00015001227rexo18362.500ENSGMOG00000011119rexo19960.933Gadus_morhua
ENSSFOG00015001227rexo19958.067ENSLOCG00000001203rexo19957.377Lepisosteus_oculatus
ENSSFOG00015001227rexo19954.157ENSMMOG00000006931rexo19953.525Mola_mola
ENSSFOG00015001227rexo19956.784ENSPNAG00000025432rexo19957.121Pygocentrus_nattereri

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