EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015001236 (Gene tree)
Gene ID: 108935960
Gene Symbol: prpf19
Alias: fb18f09|prp19|wu:fb18f09|zgc:56158
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 7226 bases
Position: chrKV411110.1:353761-360986
Accession: 108935960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001915	Prp19	PF08606.11	3.5e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001955	-	1515	XM_018754967	ENSSFOP00015001915	504 (aa)	XP_018610483	-

Gene Model

Click here to download ENSSFOG00015001236's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG
sfm04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001236's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015001236	prpf19	100	83.135	ENSG00000110107	PRPF19	100	87.500	Homo_sapiens
ENSSFOG00015001236	prpf19	100	93.465	ENSAPOG00000017823	prpf19	100	93.534	Acanthochromis_polyacanthus
ENSSFOG00015001236	prpf19	100	82.897	ENSAMEG00000007375	PRPF19	99	82.897	Ailuropoda_melanoleuca
ENSSFOG00015001236	prpf19	99	91.650	ENSACIG00000015876	prpf19	99	91.650	Amphilophus_citrinellus
ENSSFOG00015001236	prpf19	100	93.465	ENSAOCG00000020444	prpf19	100	93.465	Amphiprion_ocellaris
ENSSFOG00015001236	prpf19	100	93.465	ENSAPEG00000016076	prpf19	100	93.465	Amphiprion_percula
ENSSFOG00015001236	prpf19	100	93.663	ENSATEG00000008840	prpf19	100	93.663	Anabas_testudineus
ENSSFOG00015001236	prpf19	100	83.929	ENSACAG00000017797	PRPF19	100	83.929	Anolis_carolinensis
ENSSFOG00015001236	prpf19	100	83.333	ENSANAG00000021762	PRPF19	100	83.333	Aotus_nancymaae
ENSSFOG00015001236	prpf19	100	92.277	ENSACLG00000009416	prpf19	100	92.457	Astatotilapia_calliptera
ENSSFOG00015001236	prpf19	100	93.465	ENSAMXG00000011547	prpf19	100	93.663	Astyanax_mexicanus
ENSSFOG00015001236	prpf19	100	83.135	ENSBTAG00000014366	PRPF19	100	83.135	Bos_taurus
ENSSFOG00015001236	prpf19	100	51.581	WBGene00020423	prp-19	100	51.581	Caenorhabditis_elegans
ENSSFOG00015001236	prpf19	100	83.333	ENSCJAG00000016509	PRPF19	100	83.333	Callithrix_jacchus
ENSSFOG00015001236	prpf19	100	83.135	ENSCAFG00000016438	PRPF19	98	83.135	Canis_familiaris
ENSSFOG00015001236	prpf19	100	83.135	ENSCAFG00020012565	PRPF19	100	83.135	Canis_lupus_dingo
ENSSFOG00015001236	prpf19	100	83.135	ENSCHIG00000018281	PRPF19	100	83.135	Capra_hircus
ENSSFOG00015001236	prpf19	99	82.932	ENSTSYG00000006860	PRPF19	99	82.932	Carlito_syrichta
ENSSFOG00015001236	prpf19	99	83.166	ENSCAPG00000016225	PRPF19	100	83.166	Cavia_aperea
ENSSFOG00015001236	prpf19	100	83.333	ENSCPOG00000020688	PRPF19	100	83.333	Cavia_porcellus
ENSSFOG00015001236	prpf19	100	83.333	ENSCCAG00000025839	PRPF19	100	83.333	Cebus_capucinus
ENSSFOG00015001236	prpf19	100	83.135	ENSCATG00000041921	PRPF19	100	83.135	Cercocebus_atys
ENSSFOG00015001236	prpf19	99	83.300	ENSCLAG00000003338	PRPF19	100	83.300	Chinchilla_lanigera
ENSSFOG00015001236	prpf19	100	83.135	ENSCSAG00000006254	PRPF19	100	83.135	Chlorocebus_sabaeus
ENSSFOG00015001236	prpf19	62	73.955	ENSCHOG00000005840	PRPF19	100	73.955	Choloepus_hoffmanni
ENSSFOG00015001236	prpf19	100	84.127	ENSCPBG00000027061	PRPF19	100	83.135	Chrysemys_picta_bellii
ENSSFOG00015001236	prpf19	99	68.807	ENSCING00000016625	-	99	68.807	Ciona_intestinalis
ENSSFOG00015001236	prpf19	100	68.775	ENSCSAVG00000002027	-	100	68.775	Ciona_savignyi
ENSSFOG00015001236	prpf19	99	79.618	ENSCANG00000027155	PRPF19	99	38.716	Colobus_angolensis_palliatus
ENSSFOG00015001236	prpf19	100	83.135	ENSCGRG00001002699	Prpf19	100	83.135	Cricetulus_griseus_chok1gshd
ENSSFOG00015001236	prpf19	99	82.470	ENSCGRG00000008964	Prpf19	100	82.470	Cricetulus_griseus_crigri
ENSSFOG00015001236	prpf19	100	92.277	ENSCSEG00000010411	prpf19	100	92.277	Cynoglossus_semilaevis
ENSSFOG00015001236	prpf19	100	91.485	ENSCVAG00000012011	prpf19	100	91.485	Cyprinodon_variegatus
ENSSFOG00015001236	prpf19	100	92.277	ENSDARG00000015239	prpf19	100	92.475	Danio_rerio
ENSSFOG00015001236	prpf19	100	83.135	ENSDNOG00000005797	PRPF19	100	83.135	Dasypus_novemcinctus
ENSSFOG00015001236	prpf19	100	83.135	ENSDORG00000006906	Prpf19	100	83.135	Dipodomys_ordii
ENSSFOG00015001236	prpf19	100	65.941	FBgn0261119	Prp19	99	65.941	Drosophila_melanogaster
ENSSFOG00015001236	prpf19	100	72.619	ENSETEG00000012295	PRPF19	100	72.619	Echinops_telfairi
ENSSFOG00015001236	prpf19	83	80.000	ENSEBUG00000013075	prpf19	100	80.000	Eptatretus_burgeri
ENSSFOG00015001236	prpf19	100	82.983	ENSEASG00005008056	PRPF19	98	82.983	Equus_asinus_asinus
ENSSFOG00015001236	prpf19	100	82.937	ENSECAG00000007322	PRPF19	100	82.937	Equus_caballus
ENSSFOG00015001236	prpf19	100	84.722	ENSELUG00000004578	prpf19	100	84.722	Esox_lucius
ENSSFOG00015001236	prpf19	100	89.683	ENSELUG00000020276	-	100	89.683	Esox_lucius
ENSSFOG00015001236	prpf19	100	83.135	ENSFCAG00000013668	PRPF19	100	83.135	Felis_catus
ENSSFOG00015001236	prpf19	100	82.738	ENSFALG00000012084	PRPF19	100	82.738	Ficedula_albicollis
ENSSFOG00015001236	prpf19	84	82.701	ENSFDAG00000009420	PRPF19	96	82.701	Fukomys_damarensis
ENSSFOG00015001236	prpf19	100	91.683	ENSFHEG00000022135	prpf19	100	91.683	Fundulus_heteroclitus
ENSSFOG00015001236	prpf19	100	92.277	ENSGMOG00000014756	prpf19	100	92.277	Gadus_morhua
ENSSFOG00015001236	prpf19	100	82.937	ENSGALG00000036530	PRPF19	100	82.937	Gallus_gallus
ENSSFOG00015001236	prpf19	100	91.287	ENSGAFG00000008931	prpf19	100	91.287	Gambusia_affinis
ENSSFOG00015001236	prpf19	100	92.277	ENSGACG00000017976	prpf19	100	92.277	Gasterosteus_aculeatus
ENSSFOG00015001236	prpf19	100	83.333	ENSGAGG00000013328	PRPF19	100	83.333	Gopherus_agassizii
ENSSFOG00015001236	prpf19	100	83.135	ENSGGOG00000008648	PRPF19	100	83.135	Gorilla_gorilla
ENSSFOG00015001236	prpf19	100	92.277	ENSHBUG00000008394	prpf19	100	92.277	Haplochromis_burtoni
ENSSFOG00015001236	prpf19	100	83.135	ENSHGLG00000003934	PRPF19	100	83.135	Heterocephalus_glaber_female
ENSSFOG00015001236	prpf19	99	69.212	ENSHGLG00100010649	PRPF19	100	67.002	Heterocephalus_glaber_male
ENSSFOG00015001236	prpf19	100	90.495	ENSHCOG00000016720	prpf19	100	90.693	Hippocampus_comes
ENSSFOG00015001236	prpf19	100	93.663	ENSIPUG00000013084	prpf19	100	93.663	Ictalurus_punctatus
ENSSFOG00015001236	prpf19	100	82.937	ENSSTOG00000001598	PRPF19	100	82.937	Ictidomys_tridecemlineatus
ENSSFOG00015001236	prpf19	100	83.333	ENSJJAG00000020609	Prpf19	100	83.333	Jaculus_jaculus
ENSSFOG00015001236	prpf19	100	91.287	ENSKMAG00000010257	prpf19	100	91.287	Kryptolebias_marmoratus
ENSSFOG00015001236	prpf19	100	92.079	ENSLBEG00000027436	prpf19	100	92.079	Labrus_bergylta
ENSSFOG00015001236	prpf19	100	84.127	ENSLACG00000003434	PRPF19	100	84.127	Latimeria_chalumnae
ENSSFOG00015001236	prpf19	91	79.318	ENSLOCG00000008123	prpf19	100	79.318	Lepisosteus_oculatus
ENSSFOG00015001236	prpf19	100	80.230	ENSLAFG00000002644	PRPF19	100	80.230	Loxodonta_africana
ENSSFOG00015001236	prpf19	100	83.135	ENSMFAG00000036743	PRPF19	100	83.135	Macaca_fascicularis
ENSSFOG00015001236	prpf19	100	83.135	ENSMMUG00000014530	PRPF19	100	83.135	Macaca_mulatta
ENSSFOG00015001236	prpf19	100	83.135	ENSMNEG00000044485	PRPF19	100	83.135	Macaca_nemestrina
ENSSFOG00015001236	prpf19	100	83.135	ENSMLEG00000043312	PRPF19	100	83.135	Mandrillus_leucophaeus
ENSSFOG00015001236	prpf19	100	93.267	ENSMAMG00000006843	prpf19	100	93.534	Mastacembelus_armatus
ENSSFOG00015001236	prpf19	100	92.277	ENSMZEG00005013356	prpf19	100	92.277	Maylandia_zebra
ENSSFOG00015001236	prpf19	98	77.956	ENSMGAG00000003180	PRPF19	100	77.956	Meleagris_gallopavo
ENSSFOG00015001236	prpf19	100	82.540	ENSMAUG00000012585	Prpf19	100	82.540	Mesocricetus_auratus
ENSSFOG00015001236	prpf19	100	83.135	ENSMICG00000011236	PRPF19	100	83.135	Microcebus_murinus
ENSSFOG00015001236	prpf19	100	83.135	ENSMOCG00000010383	Prpf19	100	83.135	Microtus_ochrogaster
ENSSFOG00015001236	prpf19	100	93.651	ENSMMOG00000003138	prpf19	100	93.651	Mola_mola
ENSSFOG00015001236	prpf19	100	83.532	ENSMODG00000020338	PRPF19	100	83.532	Monodelphis_domestica
ENSSFOG00015001236	prpf19	99	85.185	ENSMALG00000010981	prpf19	99	85.185	Monopterus_albus
ENSSFOG00015001236	prpf19	100	83.135	MGP_CAROLIEiJ_G0022704	Prpf19	100	83.135	Mus_caroli
ENSSFOG00015001236	prpf19	100	83.135	ENSMUSG00000024735	Prpf19	100	83.135	Mus_musculus
ENSSFOG00015001236	prpf19	100	83.135	MGP_PahariEiJ_G0014198	Prpf19	100	83.135	Mus_pahari
ENSSFOG00015001236	prpf19	100	83.135	MGP_SPRETEiJ_G0023618	Prpf19	100	83.135	Mus_spretus
ENSSFOG00015001236	prpf19	100	83.135	ENSMPUG00000014432	PRPF19	100	83.135	Mustela_putorius_furo
ENSSFOG00015001236	prpf19	100	81.118	ENSMLUG00000017597	PRPF19	100	81.118	Myotis_lucifugus
ENSSFOG00015001236	prpf19	100	83.532	ENSNGAG00000012671	Prpf19	100	83.532	Nannospalax_galili
ENSSFOG00015001236	prpf19	100	92.475	ENSNBRG00000000055	prpf19	100	92.475	Neolamprologus_brichardi
ENSSFOG00015001236	prpf19	100	83.135	ENSNLEG00000013618	PRPF19	100	83.135	Nomascus_leucogenys
ENSSFOG00015001236	prpf19	99	80.282	ENSOPRG00000008630	PRPF19	100	80.282	Ochotona_princeps
ENSSFOG00015001236	prpf19	100	83.532	ENSODEG00000004043	PRPF19	100	83.532	Octodon_degus
ENSSFOG00015001236	prpf19	100	92.475	ENSONIG00000004880	prpf19	100	92.475	Oreochromis_niloticus
ENSSFOG00015001236	prpf19	100	79.810	ENSOCUG00000015689	PRPF19	100	79.810	Oryctolagus_cuniculus
ENSSFOG00015001236	prpf19	100	91.881	ENSORLG00000004666	prpf19	100	91.881	Oryzias_latipes
ENSSFOG00015001236	prpf19	100	91.881	ENSORLG00020013561	prpf19	100	91.881	Oryzias_latipes_hni
ENSSFOG00015001236	prpf19	100	91.881	ENSORLG00015022196	prpf19	100	91.881	Oryzias_latipes_hsok
ENSSFOG00015001236	prpf19	100	92.277	ENSOMEG00000004424	prpf19	100	92.277	Oryzias_melastigma
ENSSFOG00015001236	prpf19	100	82.937	ENSOGAG00000016756	PRPF19	100	82.937	Otolemur_garnettii
ENSSFOG00015001236	prpf19	100	83.135	ENSOARG00000015596	PRPF19	100	83.135	Ovis_aries
ENSSFOG00015001236	prpf19	99	81.729	ENSPPAG00000030246	PRPF19	100	81.729	Pan_paniscus
ENSSFOG00015001236	prpf19	100	83.135	ENSPPRG00000002470	PRPF19	100	83.135	Panthera_pardus
ENSSFOG00015001236	prpf19	99	83.099	ENSPTIG00000006541	PRPF19	99	83.099	Panthera_tigris_altaica
ENSSFOG00015001236	prpf19	100	83.135	ENSPTRG00000003724	PRPF19	100	83.135	Pan_troglodytes
ENSSFOG00015001236	prpf19	100	83.135	ENSPANG00000002762	PRPF19	100	83.135	Papio_anubis
ENSSFOG00015001236	prpf19	100	93.861	ENSPKIG00000019715	prpf19	100	93.861	Paramormyrops_kingsleyae
ENSSFOG00015001236	prpf19	83	82.578	ENSPSIG00000007497	PRPF19	100	82.578	Pelodiscus_sinensis
ENSSFOG00015001236	prpf19	100	91.865	ENSPMGG00000017527	prpf19	100	91.865	Periophthalmus_magnuspinnatus
ENSSFOG00015001236	prpf19	99	82.669	ENSPEMG00000019270	Prpf19	100	82.669	Peromyscus_maniculatus_bairdii
ENSSFOG00015001236	prpf19	99	82.241	ENSPCIG00000003485	PRPF19	80	82.241	Phascolarctos_cinereus
ENSSFOG00015001236	prpf19	100	91.485	ENSPFOG00000002558	prpf19	100	91.485	Poecilia_formosa
ENSSFOG00015001236	prpf19	100	91.485	ENSPLAG00000017942	prpf19	100	91.485	Poecilia_latipinna
ENSSFOG00015001236	prpf19	100	91.485	ENSPMEG00000008638	prpf19	100	91.485	Poecilia_mexicana
ENSSFOG00015001236	prpf19	100	92.045	ENSPREG00000002489	prpf19	96	92.045	Poecilia_reticulata
ENSSFOG00015001236	prpf19	100	82.983	ENSPPYG00000003202	PRPF19	91	82.983	Pongo_abelii
ENSSFOG00015001236	prpf19	100	82.540	ENSPCAG00000001930	PRPF19	100	82.540	Procavia_capensis
ENSSFOG00015001236	prpf19	100	83.475	ENSPCOG00000014017	PRPF19	100	83.475	Propithecus_coquereli
ENSSFOG00015001236	prpf19	100	83.135	ENSPVAG00000014669	PRPF19	100	83.135	Pteropus_vampyrus
ENSSFOG00015001236	prpf19	100	92.277	ENSPNYG00000000859	prpf19	100	92.277	Pundamilia_nyererei
ENSSFOG00015001236	prpf19	100	92.871	ENSPNAG00000019245	prpf19	100	92.871	Pygocentrus_nattereri
ENSSFOG00015001236	prpf19	100	83.135	ENSRNOG00000020897	Prpf19	100	83.135	Rattus_norvegicus
ENSSFOG00015001236	prpf19	100	83.135	ENSRBIG00000036672	PRPF19	100	83.135	Rhinopithecus_bieti
ENSSFOG00015001236	prpf19	100	83.135	ENSRROG00000041572	PRPF19	100	83.135	Rhinopithecus_roxellana
ENSSFOG00015001236	prpf19	100	83.333	ENSSBOG00000022840	PRPF19	100	83.333	Saimiri_boliviensis_boliviensis
ENSSFOG00015001236	prpf19	100	83.135	ENSSHAG00000009462	PRPF19	100	83.135	Sarcophilus_harrisii
ENSSFOG00015001236	prpf19	100	93.267	ENSSMAG00000002273	prpf19	100	93.267	Scophthalmus_maximus
ENSSFOG00015001236	prpf19	100	93.663	ENSSDUG00000003299	prpf19	100	93.663	Seriola_dumerili
ENSSFOG00015001236	prpf19	100	93.663	ENSSLDG00000003019	prpf19	100	93.663	Seriola_lalandi_dorsalis
ENSSFOG00015001236	prpf19	100	82.540	ENSSPUG00000019328	PRPF19	100	82.540	Sphenodon_punctatus
ENSSFOG00015001236	prpf19	100	93.861	ENSSPAG00000008546	prpf19	100	93.861	Stegastes_partitus
ENSSFOG00015001236	prpf19	100	82.937	ENSSSCG00000013107	PRPF19	100	82.937	Sus_scrofa
ENSSFOG00015001236	prpf19	100	82.738	ENSTGUG00000006319	PRPF19	100	82.738	Taeniopygia_guttata
ENSSFOG00015001236	prpf19	100	91.485	ENSTRUG00000008502	prpf19	100	91.485	Takifugu_rubripes
ENSSFOG00015001236	prpf19	66	91.018	ENSTNIG00000014219	prpf19	76	91.018	Tetraodon_nigroviridis
ENSSFOG00015001236	prpf19	100	82.738	ENSTTRG00000012476	PRPF19	100	82.738	Tursiops_truncatus
ENSSFOG00015001236	prpf19	100	83.135	ENSUAMG00000011280	PRPF19	100	83.135	Ursus_americanus
ENSSFOG00015001236	prpf19	84	82.464	ENSUMAG00000011609	PRPF19	83	82.464	Ursus_maritimus
ENSSFOG00015001236	prpf19	99	83.040	ENSVPAG00000010516	PRPF19	100	83.040	Vicugna_pacos
ENSSFOG00015001236	prpf19	100	83.135	ENSVVUG00000005291	PRPF19	100	83.135	Vulpes_vulpes
ENSSFOG00015001236	prpf19	100	80.638	ENSXETG00000011938	prpf19	100	80.638	Xenopus_tropicalis
ENSSFOG00015001236	prpf19	100	91.485	ENSXCOG00000003141	prpf19	100	91.485	Xiphophorus_couchianus
ENSSFOG00015001236	prpf19	100	91.683	ENSXMAG00000008485	prpf19	100	91.683	Xiphophorus_maculatus