EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015001327 (Gene tree)
Gene ID: 108926305
Gene Symbol: chd9 (1 of many)
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain-helicase-DNA-binding protein 9-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 58633 bases
Position: chrKV410852.1:5491578-5550210
Accession: 108926305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015002269	ResIII	PF04851.15	1.4e-06	1	1
ENSSFOP00015002221	ResIII	PF04851.15	1.7e-06	1	1
ENSSFOP00015002269	BRK	PF07533.16	1.3e-32	1	2
ENSSFOP00015002269	BRK	PF07533.16	1.3e-32	2	2
ENSSFOP00015002221	BRK	PF07533.16	2e-32	1	2
ENSSFOP00015002221	BRK	PF07533.16	2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015002264	-	13132	XM_018738906	ENSSFOP00015002221	2912 (aa)	XP_018594422	A0A1W4YS83
ENSSFOT00015002313	-	7236	-	ENSSFOP00015002269	2411 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015001327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015001327	chd9	71	58.489	ENSSFOG00015011577	chd8	70	59.338
ENSSFOG00015001327	chd9	97	75.625	ENSSFOG00015020209	chd9	99	75.882
ENSSFOG00015001327	chd9	70	64.184	ENSSFOG00015012920	chd6	72	64.113
ENSSFOG00015001327	chd9	80	63.403	ENSSFOG00015015077	chd7	70	68.003

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015001327	chd9	69	75.119	ENSG00000177200	CHD9	96	70.455	Homo_sapiens
ENSSFOG00015001327	chd9	98	74.624	ENSAPOG00000023034	chd9	99	73.965	Acanthochromis_polyacanthus
ENSSFOG00015001327	chd9	67	75.908	ENSAMEG00000016232	CHD9	99	61.777	Ailuropoda_melanoleuca
ENSSFOG00015001327	chd9	95	72.281	ENSACIG00000004097	chd9	98	64.625	Amphilophus_citrinellus
ENSSFOG00015001327	chd9	98	74.615	ENSAOCG00000005487	chd9	99	73.967	Amphiprion_ocellaris
ENSSFOG00015001327	chd9	98	74.615	ENSAPEG00000009859	chd9	99	73.906	Amphiprion_percula
ENSSFOG00015001327	chd9	95	75.585	ENSATEG00000002748	chd9	99	67.831	Anabas_testudineus
ENSSFOG00015001327	chd9	98	69.259	ENSAPLG00000002826	CHD9	85	67.210	Anas_platyrhynchos
ENSSFOG00015001327	chd9	69	74.318	ENSACAG00000016150	CHD9	81	68.698	Anolis_carolinensis
ENSSFOG00015001327	chd9	67	75.455	ENSANAG00000015630	CHD9	93	70.968	Aotus_nancymaae
ENSSFOG00015001327	chd9	95	74.029	ENSACLG00000016899	chd9	99	66.132	Astatotilapia_calliptera
ENSSFOG00015001327	chd9	99	72.195	ENSAMXG00000005652	chd9	99	72.852	Astyanax_mexicanus
ENSSFOG00015001327	chd9	67	75.605	ENSBTAG00000002287	CHD9	86	66.862	Bos_taurus
ENSSFOG00015001327	chd9	67	75.515	ENSCJAG00000001573	CHD9	93	71.326	Callithrix_jacchus
ENSSFOG00015001327	chd9	67	75.908	ENSCAFG00000009699	CHD9	97	62.441	Canis_familiaris
ENSSFOG00015001327	chd9	67	75.908	ENSCAFG00020002879	CHD9	93	71.685	Canis_lupus_dingo
ENSSFOG00015001327	chd9	97	60.776	ENSCHIG00000021000	CHD9	86	65.200	Capra_hircus
ENSSFOG00015001327	chd9	67	75.576	ENSTSYG00000007693	CHD9	93	71.326	Carlito_syrichta
ENSSFOG00015001327	chd9	87	62.105	ENSCAPG00000011604	CHD9	76	62.718	Cavia_aperea
ENSSFOG00015001327	chd9	67	71.760	ENSCPOG00000036544	CHD9	88	62.851	Cavia_porcellus
ENSSFOG00015001327	chd9	67	75.469	ENSCCAG00000036178	CHD9	93	70.714	Cebus_capucinus
ENSSFOG00015001327	chd9	67	75.912	ENSCATG00000036753	CHD9	93	71.326	Cercocebus_atys
ENSSFOG00015001327	chd9	67	76.039	ENSCLAG00000007137	CHD9	99	77.640	Chinchilla_lanigera
ENSSFOG00015001327	chd9	67	75.789	ENSCSAG00000005311	CHD9	98	62.080	Chlorocebus_sabaeus
ENSSFOG00015001327	chd9	71	92.188	ENSCHOG00000003935	CHD9	64	92.188	Choloepus_hoffmanni
ENSSFOG00015001327	chd9	91	80.000	ENSCPBG00000012459	CHD9	84	80.145	Chrysemys_picta_bellii
ENSSFOG00015001327	chd9	67	75.912	ENSCANG00000030349	CHD9	93	71.326	Colobus_angolensis_palliatus
ENSSFOG00015001327	chd9	67	76.044	ENSCGRG00001016150	Chd9	81	69.160	Cricetulus_griseus_chok1gshd
ENSSFOG00015001327	chd9	67	76.044	ENSCGRG00000012850	Chd9	99	77.815	Cricetulus_griseus_crigri
ENSSFOG00015001327	chd9	96	72.392	ENSCSEG00000009209	chd9	99	71.039	Cynoglossus_semilaevis
ENSSFOG00015001327	chd9	94	74.545	ENSCVAG00000016195	chd9	99	65.624	Cyprinodon_variegatus
ENSSFOG00015001327	chd9	69	79.209	ENSDARG00000074498	chd9	99	73.187	Danio_rerio
ENSSFOG00015001327	chd9	65	76.548	ENSDNOG00000006045	CHD9	97	70.056	Dasypus_novemcinctus
ENSSFOG00015001327	chd9	51	78.532	ENSDORG00000008523	-	99	69.200	Dipodomys_ordii
ENSSFOG00015001327	chd9	67	75.132	ENSETEG00000009565	CHD9	87	75.132	Echinops_telfairi
ENSSFOG00015001327	chd9	86	78.420	ENSEASG00005014832	CHD9	96	79.491	Equus_asinus_asinus
ENSSFOG00015001327	chd9	67	75.726	ENSECAG00000011505	CHD9	84	67.780	Equus_caballus
ENSSFOG00015001327	chd9	59	88.839	ENSEEUG00000014515	CHD9	71	88.839	Erinaceus_europaeus
ENSSFOG00015001327	chd9	88	76.164	ENSELUG00000006031	chd9	95	76.679	Esox_lucius
ENSSFOG00015001327	chd9	67	76.029	ENSFCAG00000022534	CHD9	93	72.043	Felis_catus
ENSSFOG00015001327	chd9	69	74.970	ENSFALG00000013276	CHD9	99	68.575	Ficedula_albicollis
ENSSFOG00015001327	chd9	67	75.932	ENSFDAG00000021037	CHD9	88	66.333	Fukomys_damarensis
ENSSFOG00015001327	chd9	95	75.532	ENSFHEG00000006068	chd9	97	74.089	Fundulus_heteroclitus
ENSSFOG00015001327	chd9	81	81.068	ENSGMOG00000006040	chd9	83	81.263	Gadus_morhua
ENSSFOG00015001327	chd9	68	75.423	ENSGALG00000039178	CHD9	86	68.169	Gallus_gallus
ENSSFOG00015001327	chd9	96	73.615	ENSGAFG00000010014	chd9	99	72.484	Gambusia_affinis
ENSSFOG00015001327	chd9	94	73.021	ENSGACG00000016694	chd9	97	79.574	Gasterosteus_aculeatus
ENSSFOG00015001327	chd9	67	75.912	ENSGGOG00000014816	CHD9	93	71.326	Gorilla_gorilla
ENSSFOG00015001327	chd9	96	74.296	ENSHBUG00000023322	chd9	97	78.322	Haplochromis_burtoni
ENSSFOG00015001327	chd9	67	76.083	ENSHGLG00000014938	CHD9	99	77.753	Heterocephalus_glaber_female
ENSSFOG00015001327	chd9	96	72.179	ENSHCOG00000000937	chd9	99	71.177	Hippocampus_comes
ENSSFOG00015001327	chd9	98	72.623	ENSIPUG00000016448	chd9	97	79.505	Ictalurus_punctatus
ENSSFOG00015001327	chd9	67	75.651	ENSSTOG00000022273	CHD9	99	77.978	Ictidomys_tridecemlineatus
ENSSFOG00015001327	chd9	51	78.458	ENSJJAG00000015741	-	97	70.612	Jaculus_jaculus
ENSSFOG00015001327	chd9	96	73.617	ENSKMAG00000016784	chd9	98	72.925	Kryptolebias_marmoratus
ENSSFOG00015001327	chd9	96	73.952	ENSLBEG00000012077	chd9	98	73.074	Labrus_bergylta
ENSSFOG00015001327	chd9	97	64.953	ENSLACG00000005557	CHD9	86	63.066	Latimeria_chalumnae
ENSSFOG00015001327	chd9	99	74.635	ENSLOCG00000007225	chd9	99	74.686	Lepisosteus_oculatus
ENSSFOG00015001327	chd9	67	75.121	ENSLAFG00000015374	CHD9	86	66.823	Loxodonta_africana
ENSSFOG00015001327	chd9	67	75.912	ENSMFAG00000041354	CHD9	95	70.378	Macaca_fascicularis
ENSSFOG00015001327	chd9	67	75.912	ENSMMUG00000016310	CHD9	93	71.326	Macaca_mulatta
ENSSFOG00015001327	chd9	67	75.912	ENSMNEG00000031494	CHD9	99	63.271	Macaca_nemestrina
ENSSFOG00015001327	chd9	67	75.912	ENSMLEG00000043219	CHD9	93	71.326	Mandrillus_leucophaeus
ENSSFOG00015001327	chd9	96	74.401	ENSMAMG00000003909	chd9	98	65.731	Mastacembelus_armatus
ENSSFOG00015001327	chd9	96	75.073	ENSMZEG00005006581	chd9	99	73.729	Maylandia_zebra
ENSSFOG00015001327	chd9	98	63.935	ENSMGAG00000004642	CHD9	64	67.469	Meleagris_gallopavo
ENSSFOG00015001327	chd9	67	75.636	ENSMICG00000016679	CHD9	93	71.326	Microcebus_murinus
ENSSFOG00015001327	chd9	95	73.353	ENSMMOG00000016406	chd9	91	68.153	Mola_mola
ENSSFOG00015001327	chd9	95	74.660	ENSMALG00000013306	chd9	99	65.832	Monopterus_albus
ENSSFOG00015001327	chd9	67	75.828	MGP_CAROLIEiJ_G0031364	Chd9	86	66.601	Mus_caroli
ENSSFOG00015001327	chd9	66	75.862	ENSMUSG00000056608	Chd9	99	77.590	Mus_musculus
ENSSFOG00015001327	chd9	67	75.644	MGP_SPRETEiJ_G0032483	Chd9	86	66.366	Mus_spretus
ENSSFOG00015001327	chd9	67	76.029	ENSMPUG00000003285	CHD9	99	61.978	Mustela_putorius_furo
ENSSFOG00015001327	chd9	67	76.266	ENSMLUG00000004456	CHD9	86	67.202	Myotis_lucifugus
ENSSFOG00015001327	chd9	96	74.127	ENSNBRG00000009423	chd9	99	72.694	Neolamprologus_brichardi
ENSSFOG00015001327	chd9	67	75.912	ENSNLEG00000001026	CHD9	90	67.578	Nomascus_leucogenys
ENSSFOG00015001327	chd9	68	96.992	ENSMEUG00000008222	-	74	93.506	Notamacropus_eugenii
ENSSFOG00015001327	chd9	55	96.992	ENSOPRG00000011168	CHD9	67	88.385	Ochotona_princeps
ENSSFOG00015001327	chd9	67	75.780	ENSODEG00000004466	CHD9	86	66.902	Octodon_degus
ENSSFOG00015001327	chd9	95	74.487	ENSONIG00000002816	chd9	98	73.868	Oreochromis_niloticus
ENSSFOG00015001327	chd9	67	77.031	ENSOANG00000013401	CHD9	85	68.156	Ornithorhynchus_anatinus
ENSSFOG00015001327	chd9	69	75.089	ENSOCUG00000001016	CHD9	97	70.000	Oryctolagus_cuniculus
ENSSFOG00015001327	chd9	97	73.715	ENSORLG00000013810	chd9	98	72.727	Oryzias_latipes
ENSSFOG00015001327	chd9	97	73.282	ENSORLG00015019126	chd9	98	72.381	Oryzias_latipes_hsok
ENSSFOG00015001327	chd9	56	81.500	ENSOMEG00000015978	chd9	89	72.727	Oryzias_melastigma
ENSSFOG00015001327	chd9	67	75.726	ENSOGAG00000002110	CHD9	85	68.145	Otolemur_garnettii
ENSSFOG00015001327	chd9	67	75.347	ENSOARG00000017664	CHD9	86	66.706	Ovis_aries
ENSSFOG00015001327	chd9	67	75.521	ENSPPAG00000039388	-	96	70.046	Pan_paniscus
ENSSFOG00015001327	chd9	67	76.029	ENSPPRG00000004801	CHD9	93	72.043	Panthera_pardus
ENSSFOG00015001327	chd9	67	74.455	ENSPTIG00000021854	CHD9	97	61.507	Panthera_tigris_altaica
ENSSFOG00015001327	chd9	67	75.852	ENSPTRG00000008113	CHD9	93	71.326	Pan_troglodytes
ENSSFOG00015001327	chd9	69	75.179	ENSPANG00000019307	CHD9	96	70.391	Papio_anubis
ENSSFOG00015001327	chd9	98	76.070	ENSPKIG00000025401	-	99	72.327	Paramormyrops_kingsleyae
ENSSFOG00015001327	chd9	95	78.016	ENSPKIG00000021876	chd9	99	76.769	Paramormyrops_kingsleyae
ENSSFOG00015001327	chd9	56	77.065	ENSPSIG00000008099	CHD9	78	72.330	Pelodiscus_sinensis
ENSSFOG00015001327	chd9	61	70.061	ENSPMAG00000006035	-	85	70.697	Petromyzon_marinus
ENSSFOG00015001327	chd9	86	71.462	ENSPCIG00000017215	CHD9	99	71.678	Phascolarctos_cinereus
ENSSFOG00015001327	chd9	69	79.083	ENSPFOG00000015839	chd9	82	72.352	Poecilia_formosa
ENSSFOG00015001327	chd9	96	74.166	ENSPLAG00000011118	chd9	99	72.975	Poecilia_latipinna
ENSSFOG00015001327	chd9	69	78.504	ENSPMEG00000015106	chd9	98	65.210	Poecilia_mexicana
ENSSFOG00015001327	chd9	96	73.820	ENSPREG00000006473	chd9	99	72.342	Poecilia_reticulata
ENSSFOG00015001327	chd9	67	75.852	ENSPPYG00000007348	CHD9	85	67.903	Pongo_abelii
ENSSFOG00015001327	chd9	72	80.543	ENSPCAG00000007564	CHD9	85	80.543	Procavia_capensis
ENSSFOG00015001327	chd9	67	73.636	ENSPCOG00000028433	CHD9	93	70.968	Propithecus_coquereli
ENSSFOG00015001327	chd9	78	73.035	ENSPVAG00000015617	CHD9	95	59.519	Pteropus_vampyrus
ENSSFOG00015001327	chd9	96	74.374	ENSPNYG00000010947	chd9	99	72.775	Pundamilia_nyererei
ENSSFOG00015001327	chd9	97	74.172	ENSPNAG00000024141	chd9	99	73.674	Pygocentrus_nattereri
ENSSFOG00015001327	chd9	66	73.801	ENSRNOG00000049302	Chd9	90	64.767	Rattus_norvegicus
ENSSFOG00015001327	chd9	67	75.791	ENSRBIG00000035553	CHD9	99	68.032	Rhinopithecus_bieti
ENSSFOG00015001327	chd9	67	76.334	ENSRROG00000033278	CHD9	97	70.265	Rhinopithecus_roxellana
ENSSFOG00015001327	chd9	67	75.515	ENSSBOG00000030240	CHD9	93	71.326	Saimiri_boliviensis_boliviensis
ENSSFOG00015001327	chd9	67	75.902	ENSSHAG00000002719	CHD9	86	66.562	Sarcophilus_harrisii
ENSSFOG00015001327	chd9	97	74.272	ENSSMAG00000008953	chd9	99	73.109	Scophthalmus_maximus
ENSSFOG00015001327	chd9	96	75.010	ENSSDUG00000006139	chd9	99	73.245	Seriola_dumerili
ENSSFOG00015001327	chd9	96	74.465	ENSSLDG00000017818	chd9	99	73.496	Seriola_lalandi_dorsalis
ENSSFOG00015001327	chd9	70	78.947	ENSSARG00000010632	CHD9	86	68.683	Sorex_araneus
ENSSFOG00015001327	chd9	98	74.503	ENSSPAG00000021649	chd9	98	74.143	Stegastes_partitus
ENSSFOG00015001327	chd9	95	68.837	ENSSSCG00000033591	CHD9	99	60.489	Sus_scrofa
ENSSFOG00015001327	chd9	67	75.915	ENSTGUG00000007476	CHD9	86	69.709	Taeniopygia_guttata
ENSSFOG00015001327	chd9	97	66.140	ENSTRUG00000009125	chd9	99	65.804	Takifugu_rubripes
ENSSFOG00015001327	chd9	67	82.938	ENSTNIG00000003825	chd9	88	82.938	Tetraodon_nigroviridis
ENSSFOG00015001327	chd9	64	65.934	ENSTBEG00000016052	-	66	66.852	Tupaia_belangeri
ENSSFOG00015001327	chd9	83	75.363	ENSTTRG00000012674	CHD9	81	66.124	Tursiops_truncatus
ENSSFOG00015001327	chd9	77	86.397	ENSUMAG00000004043	CHD9	96	86.766	Ursus_maritimus
ENSSFOG00015001327	chd9	71	76.556	ENSVPAG00000001374	CHD9	82	69.476	Vicugna_pacos
ENSSFOG00015001327	chd9	67	75.908	ENSVVUG00000019435	CHD9	97	62.475	Vulpes_vulpes
ENSSFOG00015001327	chd9	97	67.535	ENSXETG00000000349	chd9	89	68.743	Xenopus_tropicalis
ENSSFOG00015001327	chd9	96	74.160	ENSXCOG00000012997	chd9	98	73.247	Xiphophorus_couchianus
ENSSFOG00015001327	chd9	96	74.109	ENSXMAG00000016192	chd9	98	73.988	Xiphophorus_maculatus