EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015001584 (Gene tree)
Gene ID: 108927336
Gene Symbol: rbm12b
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA-binding protein 12B-A-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 2001 bases
Position: chrKV410869.1:2973754-2975754
Accession: 108927336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015002331	RRM_1	PF00076.22	6.4e-34	1	3
ENSSFOP00015002331	RRM_1	PF00076.22	6.4e-34	2	3
ENSSFOP00015002331	RRM_1	PF00076.22	6.4e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015002375	-	2001	XM_018740585	ENSSFOP00015002331	666 (aa)	XP_018596101	A0A1W4Z6D6

Gene Model

Click here to download ENSSFOG00015001584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001584's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015001584	rbm12b	74	35.363	ENSSFOG00015009427	zgc:153215	99	35.363
ENSSFOG00015001584	rbm12b	74	37.179	ENSSFOG00015016055	-	81	37.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015001584	rbm12b	86	46.753	ENSG00000183808	RBM12B	98	72.500	Homo_sapiens
ENSSFOG00015001584	rbm12b	100	47.697	ENSAPOG00000013963	rbm12b	100	47.337	Acanthochromis_polyacanthus
ENSSFOG00015001584	rbm12b	86	48.052	ENSAMEG00000007134	RBM12B	67	48.052	Ailuropoda_melanoleuca
ENSSFOG00015001584	rbm12b	76	48.039	ENSACIG00000014943	rbm12b	97	50.311	Amphilophus_citrinellus
ENSSFOG00015001584	rbm12b	73	30.392	ENSACIG00000013317	zgc:153215	99	30.392	Amphilophus_citrinellus
ENSSFOG00015001584	rbm12b	73	30.000	ENSAOCG00000010819	zgc:153215	99	30.000	Amphiprion_ocellaris
ENSSFOG00015001584	rbm12b	100	47.164	ENSAOCG00000024270	rbm12b	100	47.006	Amphiprion_ocellaris
ENSSFOG00015001584	rbm12b	98	47.925	ENSAPEG00000022079	rbm12b	99	46.951	Amphiprion_percula
ENSSFOG00015001584	rbm12b	62	51.250	ENSATEG00000001886	zgc:153215	77	46.809	Anabas_testudineus
ENSSFOG00015001584	rbm12b	100	48.373	ENSATEG00000004578	rbm12b	97	48.669	Anabas_testudineus
ENSSFOG00015001584	rbm12b	99	40.629	ENSAPLG00000002020	RBM12B	100	40.683	Anas_platyrhynchos
ENSSFOG00015001584	rbm12b	88	44.156	ENSACAG00000003463	RBM12B	58	44.156	Anolis_carolinensis
ENSSFOG00015001584	rbm12b	86	46.753	ENSANAG00000034015	RBM12B	71	46.753	Aotus_nancymaae
ENSSFOG00015001584	rbm12b	74	31.048	ENSACLG00000007675	zgc:153215	99	31.048	Astatotilapia_calliptera
ENSSFOG00015001584	rbm12b	100	48.892	ENSACLG00000005575	rbm12b	98	48.301	Astatotilapia_calliptera
ENSSFOG00015001584	rbm12b	86	45.504	ENSACLG00000005578	rbm12b	100	44.959	Astatotilapia_calliptera
ENSSFOG00015001584	rbm12b	100	49.555	ENSAMXG00000041973	rbm12b	100	50.817	Astyanax_mexicanus
ENSSFOG00015001584	rbm12b	65	51.613	ENSAMXG00000020853	zgc:153215	70	51.613	Astyanax_mexicanus
ENSSFOG00015001584	rbm12b	86	46.753	ENSBTAG00000013408	RBM12B	65	46.753	Bos_taurus
ENSSFOG00015001584	rbm12b	86	45.455	ENSCAFG00000009109	RBM12B	57	45.455	Canis_familiaris
ENSSFOG00015001584	rbm12b	86	45.455	ENSCAFG00020012203	RBM12B	65	45.455	Canis_lupus_dingo
ENSSFOG00015001584	rbm12b	74	42.885	ENSCHIG00000006790	RBM12B	67	42.885	Capra_hircus
ENSSFOG00015001584	rbm12b	86	46.753	ENSTSYG00000012515	RBM12B	57	46.753	Carlito_syrichta
ENSSFOG00015001584	rbm12b	86	46.753	ENSCAPG00000003543	RBM12B	59	46.753	Cavia_aperea
ENSSFOG00015001584	rbm12b	86	46.753	ENSCPOG00000007815	RBM12B	59	46.753	Cavia_porcellus
ENSSFOG00015001584	rbm12b	86	46.753	ENSCATG00000030769	RBM12B	65	46.753	Cercocebus_atys
ENSSFOG00015001584	rbm12b	91	46.753	ENSCLAG00000017617	RBM12B	63	46.753	Chinchilla_lanigera
ENSSFOG00015001584	rbm12b	86	46.753	ENSCSAG00000018559	RBM12B	56	46.753	Chlorocebus_sabaeus
ENSSFOG00015001584	rbm12b	83	42.857	ENSCHOG00000008934	RBM12B	61	42.857	Choloepus_hoffmanni
ENSSFOG00015001584	rbm12b	100	39.137	ENSCPBG00000003061	RBM12B	100	38.881	Chrysemys_picta_bellii
ENSSFOG00015001584	rbm12b	86	46.753	ENSCANG00000030379	RBM12B	65	46.753	Colobus_angolensis_palliatus
ENSSFOG00015001584	rbm12b	86	49.351	ENSCGRG00001008710	-	65	49.351	Cricetulus_griseus_chok1gshd
ENSSFOG00015001584	rbm12b	100	48.170	ENSCSEG00000004610	rbm12b	97	48.170	Cynoglossus_semilaevis
ENSSFOG00015001584	rbm12b	100	44.065	ENSCVAG00000011047	rbm12b	100	44.807	Cyprinodon_variegatus
ENSSFOG00015001584	rbm12b	74	33.333	ENSCVAG00000009259	-	99	33.333	Cyprinodon_variegatus
ENSSFOG00015001584	rbm12b	100	49.290	ENSDARG00000079717	rbm12b	100	49.430	Danio_rerio
ENSSFOG00015001584	rbm12b	86	45.455	ENSDNOG00000041608	RBM12B	56	45.455	Dasypus_novemcinctus
ENSSFOG00015001584	rbm12b	86	48.052	ENSDORG00000024034	-	60	48.052	Dipodomys_ordii
ENSSFOG00015001584	rbm12b	76	41.454	ENSETEG00000013005	-	67	41.454	Echinops_telfairi
ENSSFOG00015001584	rbm12b	72	30.550	ENSEBUG00000010930	-	84	32.049	Eptatretus_burgeri
ENSSFOG00015001584	rbm12b	86	46.753	ENSEASG00005016297	RBM12B	65	46.753	Equus_asinus_asinus
ENSSFOG00015001584	rbm12b	86	46.753	ENSECAG00000017870	RBM12B	58	46.753	Equus_caballus
ENSSFOG00015001584	rbm12b	73	30.351	ENSELUG00000009039	zgc:153215	97	30.389	Esox_lucius
ENSSFOG00015001584	rbm12b	86	48.052	ENSFCAG00000029274	RBM12B	66	48.052	Felis_catus
ENSSFOG00015001584	rbm12b	99	39.296	ENSFALG00000014893	RBM12B	100	39.130	Ficedula_albicollis
ENSSFOG00015001584	rbm12b	91	46.753	ENSFDAG00000005576	RBM12B	61	46.753	Fukomys_damarensis
ENSSFOG00015001584	rbm12b	100	45.455	ENSFHEG00000016425	rbm12b	100	46.109	Fundulus_heteroclitus
ENSSFOG00015001584	rbm12b	99	51.791	ENSGMOG00000013467	rbm12b	100	51.791	Gadus_morhua
ENSSFOG00015001584	rbm12b	100	39.407	ENSGALG00000035129	RBM12B	100	40.142	Gallus_gallus
ENSSFOG00015001584	rbm12b	73	31.810	ENSGAFG00000007845	zgc:153215	98	31.429	Gambusia_affinis
ENSSFOG00015001584	rbm12b	100	46.233	ENSGAFG00000007224	rbm12b	100	46.402	Gambusia_affinis
ENSSFOG00015001584	rbm12b	100	48.180	ENSGACG00000008682	rbm12b	99	48.180	Gasterosteus_aculeatus
ENSSFOG00015001584	rbm12b	100	39.286	ENSGAGG00000009774	RBM12B	100	39.118	Gopherus_agassizii
ENSSFOG00015001584	rbm12b	86	46.753	ENSGGOG00000011909	RBM12B	64	46.753	Gorilla_gorilla
ENSSFOG00015001584	rbm12b	100	46.619	ENSHBUG00000016227	rbm12b	100	46.619	Haplochromis_burtoni
ENSSFOG00015001584	rbm12b	91	46.753	ENSHGLG00000009063	RBM12B	63	46.753	Heterocephalus_glaber_female
ENSSFOG00015001584	rbm12b	91	46.753	ENSHGLG00100021324	RBM12B	63	46.753	Heterocephalus_glaber_male
ENSSFOG00015001584	rbm12b	100	45.889	ENSHCOG00000014952	rbm12b	100	45.808	Hippocampus_comes
ENSSFOG00015001584	rbm12b	73	30.074	ENSIPUG00000019731	zgc:153215	98	30.074	Ictalurus_punctatus
ENSSFOG00015001584	rbm12b	100	51.488	ENSIPUG00000001167	RBM12B	97	52.012	Ictalurus_punctatus
ENSSFOG00015001584	rbm12b	86	46.753	ENSSTOG00000027445	RBM12B	67	46.753	Ictidomys_tridecemlineatus
ENSSFOG00015001584	rbm12b	86	46.753	ENSJJAG00000004165	-	65	46.753	Jaculus_jaculus
ENSSFOG00015001584	rbm12b	99	44.787	ENSKMAG00000013715	rbm12b	99	44.444	Kryptolebias_marmoratus
ENSSFOG00015001584	rbm12b	99	44.640	ENSKMAG00000013704	rbm12b	97	44.298	Kryptolebias_marmoratus
ENSSFOG00015001584	rbm12b	73	31.412	ENSKMAG00000004958	zgc:153215	99	31.412	Kryptolebias_marmoratus
ENSSFOG00015001584	rbm12b	73	30.952	ENSLBEG00000002597	zgc:153215	98	31.349	Labrus_bergylta
ENSSFOG00015001584	rbm12b	99	41.880	ENSLACG00000007177	RBM12B	100	41.679	Latimeria_chalumnae
ENSSFOG00015001584	rbm12b	100	56.278	ENSLOCG00000018344	rbm12b	100	55.852	Lepisosteus_oculatus
ENSSFOG00015001584	rbm12b	100	43.058	ENSLAFG00000029949	RBM12B	67	46.753	Loxodonta_africana
ENSSFOG00015001584	rbm12b	86	46.753	ENSMFAG00000045430	RBM12B	65	46.753	Macaca_fascicularis
ENSSFOG00015001584	rbm12b	86	46.753	ENSMMUG00000005558	RBM12B	64	46.753	Macaca_mulatta
ENSSFOG00015001584	rbm12b	86	46.753	ENSMNEG00000041292	RBM12B	65	46.753	Macaca_nemestrina
ENSSFOG00015001584	rbm12b	86	46.753	ENSMLEG00000037288	RBM12B	64	46.753	Mandrillus_leucophaeus
ENSSFOG00015001584	rbm12b	100	49.329	ENSMAMG00000011998	rbm12b	100	49.329	Mastacembelus_armatus
ENSSFOG00015001584	rbm12b	100	49.188	ENSMZEG00005015005	rbm12b	100	48.597	Maylandia_zebra
ENSSFOG00015001584	rbm12b	100	47.415	ENSMZEG00005014845	rbm12b	99	46.736	Maylandia_zebra
ENSSFOG00015001584	rbm12b	74	42.436	ENSMGAG00000011985	RBM12B	98	42.941	Meleagris_gallopavo
ENSSFOG00015001584	rbm12b	86	49.351	ENSMAUG00000021752	-	68	49.351	Mesocricetus_auratus
ENSSFOG00015001584	rbm12b	86	46.753	ENSMICG00000036969	RBM12B	66	46.753	Microcebus_murinus
ENSSFOG00015001584	rbm12b	86	46.753	ENSMOCG00000005603	-	67	46.753	Microtus_ochrogaster
ENSSFOG00015001584	rbm12b	99	48.042	ENSMMOG00000002404	rbm12b	94	47.590	Mola_mola
ENSSFOG00015001584	rbm12b	86	46.753	ENSMODG00000007436	RBM12B	76	46.753	Monodelphis_domestica
ENSSFOG00015001584	rbm12b	100	46.774	ENSMALG00000012059	rbm12b	100	46.746	Monopterus_albus
ENSSFOG00015001584	rbm12b	76	32.470	ENSMALG00000001222	zgc:153215	98	32.470	Monopterus_albus
ENSSFOG00015001584	rbm12b	85	52.000	ENSMUSG00000046667	Rbm12b1	67	52.000	Mus_musculus
ENSSFOG00015001584	rbm12b	85	50.685	ENSMUSG00000052137	Rbm12b2	67	50.685	Mus_musculus
ENSSFOG00015001584	rbm12b	85	50.685	MGP_SPRETEiJ_G0026765	-	61	50.685	Mus_spretus
ENSSFOG00015001584	rbm12b	85	50.685	MGP_SPRETEiJ_G0026766	-	67	50.685	Mus_spretus
ENSSFOG00015001584	rbm12b	86	46.753	ENSMPUG00000018637	RBM12B	57	46.753	Mustela_putorius_furo
ENSSFOG00015001584	rbm12b	86	43.564	ENSMLUG00000002359	RBM12B	59	43.564	Myotis_lucifugus
ENSSFOG00015001584	rbm12b	86	45.455	ENSNGAG00000002801	-	61	45.455	Nannospalax_galili
ENSSFOG00015001584	rbm12b	100	48.744	ENSNBRG00000015057	rbm12b	100	48.744	Neolamprologus_brichardi
ENSSFOG00015001584	rbm12b	86	46.753	ENSNLEG00000032050	RBM12B	64	46.753	Nomascus_leucogenys
ENSSFOG00015001584	rbm12b	86	46.753	ENSODEG00000019204	RBM12B	60	46.753	Octodon_degus
ENSSFOG00015001584	rbm12b	100	49.481	ENSONIG00000020612	rbm12b	100	49.481	Oreochromis_niloticus
ENSSFOG00015001584	rbm12b	74	32.270	ENSONIG00000006054	zgc:153215	100	31.860	Oreochromis_niloticus
ENSSFOG00015001584	rbm12b	100	39.545	ENSOANG00000015735	-	82	51.948	Ornithorhynchus_anatinus
ENSSFOG00015001584	rbm12b	86	46.753	ENSOCUG00000010353	RBM12B	65	46.753	Oryctolagus_cuniculus
ENSSFOG00015001584	rbm12b	100	44.925	ENSORLG00000008228	rbm12b	98	44.889	Oryzias_latipes
ENSSFOG00015001584	rbm12b	100	44.444	ENSORLG00020013619	rbm12b	98	44.444	Oryzias_latipes_hni
ENSSFOG00015001584	rbm12b	100	44.478	ENSORLG00015019999	rbm12b	98	44.444	Oryzias_latipes_hsok
ENSSFOG00015001584	rbm12b	100	45.735	ENSOMEG00000022523	rbm12b	98	45.735	Oryzias_melastigma
ENSSFOG00015001584	rbm12b	76	30.375	ENSOMEG00000004220	zgc:153215	99	30.375	Oryzias_melastigma
ENSSFOG00015001584	rbm12b	86	46.753	ENSOGAG00000002979	RBM12B	57	46.753	Otolemur_garnettii
ENSSFOG00015001584	rbm12b	86	48.052	ENSPTIG00000020071	RBM12B	66	48.052	Panthera_tigris_altaica
ENSSFOG00015001584	rbm12b	86	46.753	ENSPTRG00000020420	RBM12B	64	46.753	Pan_troglodytes
ENSSFOG00015001584	rbm12b	86	46.753	ENSPANG00000035535	RBM12B	64	46.753	Papio_anubis
ENSSFOG00015001584	rbm12b	73	34.308	ENSPKIG00000014851	zgc:153215	98	34.308	Paramormyrops_kingsleyae
ENSSFOG00015001584	rbm12b	100	64.083	ENSPKIG00000018719	rbm12b	99	64.671	Paramormyrops_kingsleyae
ENSSFOG00015001584	rbm12b	100	40.254	ENSPSIG00000001348	RBM12B	100	40.395	Pelodiscus_sinensis
ENSSFOG00015001584	rbm12b	67	47.892	ENSPMGG00000012348	-	95	47.892	Periophthalmus_magnuspinnatus
ENSSFOG00015001584	rbm12b	86	49.351	ENSPEMG00000008279	-	67	49.351	Peromyscus_maniculatus_bairdii
ENSSFOG00015001584	rbm12b	86	46.753	ENSPCIG00000008556	RBM12B	78	46.753	Phascolarctos_cinereus
ENSSFOG00015001584	rbm12b	70	46.903	ENSPFOG00000017451	zgc:153215	74	46.903	Poecilia_formosa
ENSSFOG00015001584	rbm12b	100	47.015	ENSPFOG00000020937	rbm12b	97	47.164	Poecilia_formosa
ENSSFOG00015001584	rbm12b	100	47.015	ENSPLAG00000018782	rbm12b	100	47.164	Poecilia_latipinna
ENSSFOG00015001584	rbm12b	74	30.315	ENSPLAG00000000232	zgc:153215	99	30.315	Poecilia_latipinna
ENSSFOG00015001584	rbm12b	100	46.866	ENSPMEG00000011418	rbm12b	100	47.463	Poecilia_mexicana
ENSSFOG00015001584	rbm12b	74	30.512	ENSPMEG00000016662	zgc:153215	99	30.512	Poecilia_mexicana
ENSSFOG00015001584	rbm12b	100	46.716	ENSPREG00000020770	rbm12b	100	47.173	Poecilia_reticulata
ENSSFOG00015001584	rbm12b	73	31.599	ENSPREG00000018608	zgc:153215	99	31.599	Poecilia_reticulata
ENSSFOG00015001584	rbm12b	86	46.753	ENSPPYG00000018745	RBM12B	56	46.753	Pongo_abelii
ENSSFOG00015001584	rbm12b	86	48.052	ENSPCOG00000023546	RBM12B	64	48.052	Propithecus_coquereli
ENSSFOG00015001584	rbm12b	86	46.753	ENSPVAG00000011803	RBM12B	62	46.753	Pteropus_vampyrus
ENSSFOG00015001584	rbm12b	100	48.892	ENSPNYG00000016696	rbm12b	100	48.301	Pundamilia_nyererei
ENSSFOG00015001584	rbm12b	100	51.929	ENSPNAG00000008126	rbm12b	97	51.627	Pygocentrus_nattereri
ENSSFOG00015001584	rbm12b	63	51.136	ENSPNAG00000025628	zgc:153215	75	51.136	Pygocentrus_nattereri
ENSSFOG00015001584	rbm12b	74	42.315	ENSRNOG00000055292	LOC679087	65	42.315	Rattus_norvegicus
ENSSFOG00015001584	rbm12b	85	50.685	ENSRNOG00000016330	Rbm12b	67	50.685	Rattus_norvegicus
ENSSFOG00015001584	rbm12b	86	46.753	ENSRBIG00000035046	RBM12B	64	46.753	Rhinopithecus_bieti
ENSSFOG00015001584	rbm12b	86	46.753	ENSRROG00000023660	RBM12B	67	46.753	Rhinopithecus_roxellana
ENSSFOG00015001584	rbm12b	86	46.753	ENSSBOG00000027592	RBM12B	64	46.753	Saimiri_boliviensis_boliviensis
ENSSFOG00015001584	rbm12b	86	46.753	ENSSHAG00000015335	RBM12B	78	46.753	Sarcophilus_harrisii
ENSSFOG00015001584	rbm12b	100	49.926	ENSSMAG00000019708	rbm12b	100	50.222	Scophthalmus_maximus
ENSSFOG00015001584	rbm12b	73	31.384	ENSSMAG00000019013	zgc:153215	96	31.384	Scophthalmus_maximus
ENSSFOG00015001584	rbm12b	74	31.384	ENSSDUG00000012545	zgc:153215	98	31.969	Seriola_dumerili
ENSSFOG00015001584	rbm12b	100	48.988	ENSSDUG00000006856	rbm12b	100	48.555	Seriola_dumerili
ENSSFOG00015001584	rbm12b	100	48.780	ENSSLDG00000016156	rbm12b	100	48.921	Seriola_lalandi_dorsalis
ENSSFOG00015001584	rbm12b	74	51.250	ENSSLDG00000013581	zgc:153215	77	46.237	Seriola_lalandi_dorsalis
ENSSFOG00015001584	rbm12b	74	42.200	ENSSARG00000011845	-	67	42.200	Sorex_araneus
ENSSFOG00015001584	rbm12b	75	39.548	ENSSPUG00000016954	RBM12B	92	39.734	Sphenodon_punctatus
ENSSFOG00015001584	rbm12b	75	30.891	ENSSPAG00000023584	zgc:153215	100	30.891	Stegastes_partitus
ENSSFOG00015001584	rbm12b	100	48.426	ENSSPAG00000006774	rbm12b	100	47.438	Stegastes_partitus
ENSSFOG00015001584	rbm12b	85	48.000	ENSSSCG00000006110	RBM12B	57	48.000	Sus_scrofa
ENSSFOG00015001584	rbm12b	74	41.833	ENSTGUG00000011860	RBM12B	98	41.833	Taeniopygia_guttata
ENSSFOG00015001584	rbm12b	100	47.181	ENSTRUG00000013738	rbm12b	100	47.181	Takifugu_rubripes
ENSSFOG00015001584	rbm12b	76	40.909	ENSTBEG00000000449	RBM12B	64	40.909	Tupaia_belangeri
ENSSFOG00015001584	rbm12b	86	46.753	ENSUAMG00000023639	RBM12B	64	46.753	Ursus_americanus
ENSSFOG00015001584	rbm12b	86	46.753	ENSUMAG00000016008	RBM12B	61	46.753	Ursus_maritimus
ENSSFOG00015001584	rbm12b	86	45.455	ENSVVUG00000002694	RBM12B	65	45.455	Vulpes_vulpes
ENSSFOG00015001584	rbm12b	77	34.542	ENSXETG00000014696	rbm12b	99	31.453	Xenopus_tropicalis
ENSSFOG00015001584	rbm12b	100	36.558	ENSXETG00000014694	rbm12b	99	39.034	Xenopus_tropicalis
ENSSFOG00015001584	rbm12b	74	30.814	ENSXCOG00000019654	zgc:153215	98	30.814	Xiphophorus_couchianus
ENSSFOG00015001584	rbm12b	62	40.741	ENSXMAG00000013169	-	95	40.741	Xiphophorus_maculatus
ENSSFOG00015001584	rbm12b	100	46.875	ENSXMAG00000014213	rbm12b	100	46.954	Xiphophorus_maculatus