EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015001633 (Gene tree)
Gene ID: 108925745
Gene Symbol: ppargc1a (1 of many)
Alias: PGC1|gb:dq017637|ppargc1al
Full Name: PPARG coactivator 1 alpha
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 185780 bases
Position: chrKV410846.1:2884776-3070555
Accession: 108925745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015002405	RRM_1	PF00076.22	8.4e-08	1	1
ENSSFOP00015002413	RRM_1	PF00076.22	8.4e-08	1	1
ENSSFOP00015002420	RRM_1	PF00076.22	8.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015002457	-	3654	XM_018737964	ENSSFOP00015002413	946 (aa)	XP_018593480	-
ENSSFOT00015002449	-	3896	-	ENSSFOP00015002405	947 (aa)	-	-
ENSSFOT00015002464	-	3185	-	ENSSFOP00015002420	961 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015001633's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04371	Apelin signaling pathway	KEGG
sfm04910	Insulin signaling pathway	KEGG
sfm04920	Adipocytokine signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001633's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015001633	ppargc1a	86	62.651	ENSG00000109819	PPARGC1A	79	82.051	Homo_sapiens
ENSSFOG00015001633	ppargc1a	82	74.477	ENSAPOG00000018632	ppargc1a	92	73.853	Acanthochromis_polyacanthus
ENSSFOG00015001633	ppargc1a	56	72.727	ENSACIG00000009732	ppargc1a	56	78.453	Amphilophus_citrinellus
ENSSFOG00015001633	ppargc1a	82	74.477	ENSAOCG00000006754	ppargc1a	71	76.549	Amphiprion_ocellaris
ENSSFOG00015001633	ppargc1a	77	72.689	ENSATEG00000016702	ppargc1a	91	73.191	Anabas_testudineus
ENSSFOG00015001633	ppargc1a	84	67.265	ENSAPLG00000005303	PPARGC1A	53	67.677	Anas_platyrhynchos
ENSSFOG00015001633	ppargc1a	61	49.669	ENSACAG00000015737	PPARGC1B	58	49.669	Anolis_carolinensis
ENSSFOG00015001633	ppargc1a	84	69.058	ENSACAG00000000741	PPARGC1A	87	69.058	Anolis_carolinensis
ENSSFOG00015001633	ppargc1a	86	62.651	ENSANAG00000035930	PPARGC1A	53	67.677	Aotus_nancymaae
ENSSFOG00015001633	ppargc1a	87	71.749	ENSACLG00000001002	ppargc1a	89	81.065	Astatotilapia_calliptera
ENSSFOG00015001633	ppargc1a	76	93.421	ENSAMXG00000002461	ppargc1a	90	93.421	Astyanax_mexicanus
ENSSFOG00015001633	ppargc1a	84	68.161	ENSBTAG00000017024	PPARGC1A	53	68.161	Bos_taurus
ENSSFOG00015001633	ppargc1a	86	62.651	ENSCJAG00000013024	PPARGC1A	53	67.172	Callithrix_jacchus
ENSSFOG00015001633	ppargc1a	59	55.725	ENSCAFG00000018275	PPARGC1B	52	55.725	Canis_familiaris
ENSSFOG00015001633	ppargc1a	86	63.563	ENSCAFG00000016519	PPARGC1A	50	72.316	Canis_familiaris
ENSSFOG00015001633	ppargc1a	84	68.161	ENSCHIG00000015991	PPARGC1A	53	68.161	Capra_hircus
ENSSFOG00015001633	ppargc1a	51	55.725	ENSCHIG00000004409	PPARGC1B	50	55.725	Capra_hircus
ENSSFOG00015001633	ppargc1a	86	63.052	ENSTSYG00000010439	PPARGC1A	53	67.556	Carlito_syrichta
ENSSFOG00015001633	ppargc1a	56	51.908	ENSTSYG00000034354	PPARGC1B	51	51.908	Carlito_syrichta
ENSSFOG00015001633	ppargc1a	86	62.651	ENSCCAG00000024681	PPARGC1A	54	67.111	Cebus_capucinus
ENSSFOG00015001633	ppargc1a	86	62.651	ENSCATG00000032575	PPARGC1A	53	67.172	Cercocebus_atys
ENSSFOG00015001633	ppargc1a	82	67.713	ENSCLAG00000002058	PPARGC1A	53	67.713	Chinchilla_lanigera
ENSSFOG00015001633	ppargc1a	86	62.651	ENSCSAG00000016575	PPARGC1A	53	67.172	Chlorocebus_sabaeus
ENSSFOG00015001633	ppargc1a	86	62.651	ENSCANG00000033426	PPARGC1A	53	67.111	Colobus_angolensis_palliatus
ENSSFOG00015001633	ppargc1a	84	68.161	ENSCGRG00001015534	Ppargc1a	53	68.161	Cricetulus_griseus_chok1gshd
ENSSFOG00015001633	ppargc1a	84	68.161	ENSCGRG00000000200	Ppargc1a	53	68.161	Cricetulus_griseus_crigri
ENSSFOG00015001633	ppargc1a	90	61.272	ENSCSEG00000006884	ppargc1a	63	76.549	Cynoglossus_semilaevis
ENSSFOG00015001633	ppargc1a	85	60.800	ENSCVAG00000016547	ppargc1a	76	47.801	Cyprinodon_variegatus
ENSSFOG00015001633	ppargc1a	81	73.611	ENSDARG00000067829	ppargc1a	90	74.519	Danio_rerio
ENSSFOG00015001633	ppargc1a	84	67.713	ENSDNOG00000041106	PPARGC1A	95	67.713	Dasypus_novemcinctus
ENSSFOG00015001633	ppargc1a	86	63.563	ENSEASG00005007984	PPARGC1A	53	68.161	Equus_asinus_asinus
ENSSFOG00015001633	ppargc1a	57	54.962	ENSEASG00005002826	PPARGC1B	50	54.962	Equus_asinus_asinus
ENSSFOG00015001633	ppargc1a	85	62.931	ENSECAG00000009164	PPARGC1A	50	67.788	Equus_caballus
ENSSFOG00015001633	ppargc1a	83	65.753	ENSEEUG00000009219	PPARGC1A	53	65.990	Erinaceus_europaeus
ENSSFOG00015001633	ppargc1a	82	76.364	ENSELUG00000017027	ppargc1a	92	76.364	Esox_lucius
ENSSFOG00015001633	ppargc1a	86	63.158	ENSFCAG00000000043	PPARGC1A	53	67.713	Felis_catus
ENSSFOG00015001633	ppargc1a	83	68.545	ENSFALG00000009211	PPARGC1A	52	68.545	Ficedula_albicollis
ENSSFOG00015001633	ppargc1a	86	63.563	ENSFDAG00000005659	PPARGC1A	53	68.161	Fukomys_damarensis
ENSSFOG00015001633	ppargc1a	80	72.269	ENSFHEG00000021990	ppargc1a	86	78.571	Fundulus_heteroclitus
ENSSFOG00015001633	ppargc1a	84	67.713	ENSGALG00000042851	PPARGC1A	53	68.182	Gallus_gallus
ENSSFOG00015001633	ppargc1a	84	71.849	ENSGAFG00000015514	ppargc1a	96	74.779	Gambusia_affinis
ENSSFOG00015001633	ppargc1a	82	68.116	ENSGAGG00000007043	PPARGC1A	51	68.116	Gopherus_agassizii
ENSSFOG00015001633	ppargc1a	86	62.651	ENSGGOG00000009810	PPARGC1A	53	67.172	Gorilla_gorilla
ENSSFOG00015001633	ppargc1a	73	81.065	ENSHBUG00000005269	ppargc1a	89	90.164	Haplochromis_burtoni
ENSSFOG00015001633	ppargc1a	84	62.771	ENSHGLG00000007022	PPARGC1A	52	67.633	Heterocephalus_glaber_female
ENSSFOG00015001633	ppargc1a	86	63.563	ENSHGLG00100000133	PPARGC1A	53	68.161	Heterocephalus_glaber_male
ENSSFOG00015001633	ppargc1a	83	74.894	ENSHCOG00000014886	ppargc1a	94	74.894	Hippocampus_comes
ENSSFOG00015001633	ppargc1a	59	55.725	ENSSTOG00000024758	PPARGC1B	50	55.725	Ictidomys_tridecemlineatus
ENSSFOG00015001633	ppargc1a	84	67.713	ENSSTOG00000012522	PPARGC1A	53	67.713	Ictidomys_tridecemlineatus
ENSSFOG00015001633	ppargc1a	77	71.901	ENSKMAG00000005390	ppargc1a	95	76.923	Kryptolebias_marmoratus
ENSSFOG00015001633	ppargc1a	84	73.109	ENSLBEG00000019562	ppargc1a	50	78.857	Labrus_bergylta
ENSSFOG00015001633	ppargc1a	56	47.429	ENSLACG00000011232	PPARGC1B	51	47.429	Latimeria_chalumnae
ENSSFOG00015001633	ppargc1a	86	64.050	ENSLACG00000014054	PPARGC1A	95	66.667	Latimeria_chalumnae
ENSSFOG00015001633	ppargc1a	84	72.803	ENSLOCG00000012350	ppargc1a	93	75.556	Lepisosteus_oculatus
ENSSFOG00015001633	ppargc1a	84	68.610	ENSLAFG00000012981	PPARGC1A	53	68.610	Loxodonta_africana
ENSSFOG00015001633	ppargc1a	86	62.651	ENSMFAG00000000534	PPARGC1A	53	67.172	Macaca_fascicularis
ENSSFOG00015001633	ppargc1a	86	62.651	ENSMMUG00000001844	PPARGC1A	95	67.111	Macaca_mulatta
ENSSFOG00015001633	ppargc1a	86	62.651	ENSMNEG00000028682	PPARGC1A	53	67.172	Macaca_nemestrina
ENSSFOG00015001633	ppargc1a	86	62.651	ENSMLEG00000034233	PPARGC1A	53	67.172	Mandrillus_leucophaeus
ENSSFOG00015001633	ppargc1a	77	73.109	ENSMAMG00000005531	ppargc1a	92	76.106	Mastacembelus_armatus
ENSSFOG00015001633	ppargc1a	88	73.109	ENSMZEG00005001739	ppargc1a	71	75.664	Maylandia_zebra
ENSSFOG00015001633	ppargc1a	83	68.807	ENSMGAG00000012485	PPARGC1A	52	68.807	Meleagris_gallopavo
ENSSFOG00015001633	ppargc1a	84	68.161	ENSMAUG00000011811	Ppargc1a	53	68.161	Mesocricetus_auratus
ENSSFOG00015001633	ppargc1a	86	63.454	ENSMICG00000015390	PPARGC1A	53	67.556	Microcebus_murinus
ENSSFOG00015001633	ppargc1a	84	67.713	ENSMOCG00000008765	Ppargc1a	53	67.713	Microtus_ochrogaster
ENSSFOG00015001633	ppargc1a	73	80.606	ENSMMOG00000011847	ppargc1a	85	80.606	Mola_mola
ENSSFOG00015001633	ppargc1a	56	56.117	ENSMALG00000004625	ppargc1a	68	50.289	Monopterus_albus
ENSSFOG00015001633	ppargc1a	84	66.368	MGP_CAROLIEiJ_G0027213	Ppargc1a	53	66.368	Mus_caroli
ENSSFOG00015001633	ppargc1a	84	66.518	ENSMUSG00000029167	Ppargc1a	53	66.518	Mus_musculus
ENSSFOG00015001633	ppargc1a	84	65.919	MGP_PahariEiJ_G0016995	Ppargc1a	53	65.919	Mus_pahari
ENSSFOG00015001633	ppargc1a	84	66.518	MGP_SPRETEiJ_G0028208	Ppargc1a	53	66.518	Mus_spretus
ENSSFOG00015001633	ppargc1a	84	66.816	ENSMLUG00000016307	PPARGC1A	50	72.316	Myotis_lucifugus
ENSSFOG00015001633	ppargc1a	84	66.816	ENSNGAG00000015090	Ppargc1a	53	67.677	Nannospalax_galili
ENSSFOG00015001633	ppargc1a	73	81.065	ENSNBRG00000023403	ppargc1a	90	81.065	Neolamprologus_brichardi
ENSSFOG00015001633	ppargc1a	86	62.651	ENSNLEG00000016760	PPARGC1A	53	67.111	Nomascus_leucogenys
ENSSFOG00015001633	ppargc1a	84	65.471	ENSOPRG00000012899	PPARGC1A	53	66.667	Ochotona_princeps
ENSSFOG00015001633	ppargc1a	58	54.962	ENSOPRG00000010017	PPARGC1B	52	54.962	Ochotona_princeps
ENSSFOG00015001633	ppargc1a	82	70.796	ENSONIG00000007635	ppargc1a	95	69.397	Oreochromis_niloticus
ENSSFOG00015001633	ppargc1a	85	66.387	ENSOANG00000006680	PPARGC1A	53	69.474	Ornithorhynchus_anatinus
ENSSFOG00015001633	ppargc1a	84	65.919	ENSOCUG00000014668	PPARGC1A	53	67.172	Oryctolagus_cuniculus
ENSSFOG00015001633	ppargc1a	82	75.556	ENSORLG00000004788	ppargc1a	96	75.556	Oryzias_latipes
ENSSFOG00015001633	ppargc1a	80	75.556	ENSORLG00020014690	ppargc1a	94	75.556	Oryzias_latipes_hni
ENSSFOG00015001633	ppargc1a	53	90.789	ENSORLG00015012206	ppargc1a	81	90.789	Oryzias_latipes_hsok
ENSSFOG00015001633	ppargc1a	78	74.762	ENSOMEG00000000670	ppargc1a	91	74.882	Oryzias_melastigma
ENSSFOG00015001633	ppargc1a	86	63.052	ENSOGAG00000014559	PPARGC1A	53	67.556	Otolemur_garnettii
ENSSFOG00015001633	ppargc1a	84	68.161	ENSOARG00000005581	PPARGC1A	51	68.161	Ovis_aries
ENSSFOG00015001633	ppargc1a	84	66.667	ENSPPAG00000034694	PPARGC1A	53	67.172	Pan_paniscus
ENSSFOG00015001633	ppargc1a	86	63.158	ENSPPRG00000001711	PPARGC1A	53	67.713	Panthera_pardus
ENSSFOG00015001633	ppargc1a	86	63.158	ENSPTIG00000007378	PPARGC1A	53	67.713	Panthera_tigris_altaica
ENSSFOG00015001633	ppargc1a	84	67.111	ENSPTRG00000015954	PPARGC1A	53	67.172	Pan_troglodytes
ENSSFOG00015001633	ppargc1a	86	62.651	ENSPANG00000005420	PPARGC1A	53	67.172	Papio_anubis
ENSSFOG00015001633	ppargc1a	84	72.653	ENSPKIG00000002531	ppargc1a	70	73.967	Paramormyrops_kingsleyae
ENSSFOG00015001633	ppargc1a	84	68.610	ENSPSIG00000011790	PPARGC1A	53	68.610	Pelodiscus_sinensis
ENSSFOG00015001633	ppargc1a	50	49.669	ENSPSIG00000008358	PPARGC1B	54	48.684	Pelodiscus_sinensis
ENSSFOG00015001633	ppargc1a	60	53.676	ENSPEMG00000018822	Ppargc1b	52	53.676	Peromyscus_maniculatus_bairdii
ENSSFOG00015001633	ppargc1a	84	68.161	ENSPEMG00000010892	Ppargc1a	53	68.161	Peromyscus_maniculatus_bairdii
ENSSFOG00015001633	ppargc1a	84	68.161	ENSPCIG00000015835	PPARGC1A	51	69.730	Phascolarctos_cinereus
ENSSFOG00015001633	ppargc1a	84	72.689	ENSPFOG00000001263	ppargc1a	91	75.664	Poecilia_formosa
ENSSFOG00015001633	ppargc1a	84	73.109	ENSPMEG00000000720	ppargc1a	90	76.106	Poecilia_mexicana
ENSSFOG00015001633	ppargc1a	85	71.542	ENSPREG00000019171	ppargc1a	96	75.664	Poecilia_reticulata
ENSSFOG00015001633	ppargc1a	86	62.651	ENSPPYG00000014640	PPARGC1A	53	67.172	Pongo_abelii
ENSSFOG00015001633	ppargc1a	84	66.368	ENSPCAG00000016308	PPARGC1A	50	69.492	Procavia_capensis
ENSSFOG00015001633	ppargc1a	86	63.052	ENSPCOG00000022858	PPARGC1A	53	67.556	Propithecus_coquereli
ENSSFOG00015001633	ppargc1a	88	73.529	ENSPNYG00000006846	ppargc1a	71	76.106	Pundamilia_nyererei
ENSSFOG00015001633	ppargc1a	82	92.105	ENSPNAG00000010393	ppargc1a	79	92.105	Pygocentrus_nattereri
ENSSFOG00015001633	ppargc1a	84	66.816	ENSRNOG00000004473	Ppargc1a	53	66.816	Rattus_norvegicus
ENSSFOG00015001633	ppargc1a	86	62.651	ENSRBIG00000032333	PPARGC1A	53	67.111	Rhinopithecus_bieti
ENSSFOG00015001633	ppargc1a	86	62.651	ENSRROG00000010419	PPARGC1A	53	67.111	Rhinopithecus_roxellana
ENSSFOG00015001633	ppargc1a	86	62.651	ENSSBOG00000006423	PPARGC1A	53	67.677	Saimiri_boliviensis_boliviensis
ENSSFOG00015001633	ppargc1a	84	68.161	ENSSHAG00000010033	PPARGC1A	51	68.161	Sarcophilus_harrisii
ENSSFOG00015001633	ppargc1a	82	76.106	ENSSMAG00000011571	ppargc1a	95	76.106	Scophthalmus_maximus
ENSSFOG00015001633	ppargc1a	71	72.800	ENSSARG00000000575	PPARGC1A	88	65.471	Sorex_araneus
ENSSFOG00015001633	ppargc1a	84	68.161	ENSSPUG00000013556	PPARGC1A	53	68.182	Sphenodon_punctatus
ENSSFOG00015001633	ppargc1a	75	81.325	ENSSPAG00000023514	ppargc1a	87	81.325	Stegastes_partitus
ENSSFOG00015001633	ppargc1a	84	68.161	ENSSSCG00000029275	PPARGC1A	53	68.161	Sus_scrofa
ENSSFOG00015001633	ppargc1a	84	69.507	ENSTGUG00000009487	PPARGC1A	53	69.507	Taeniopygia_guttata
ENSSFOG00015001633	ppargc1a	84	67.265	ENSTTRG00000005327	PPARGC1A	53	67.265	Tursiops_truncatus
ENSSFOG00015001633	ppargc1a	76	59.864	ENSVPAG00000003478	PPARGC1A	53	65.657	Vicugna_pacos
ENSSFOG00015001633	ppargc1a	59	55.725	ENSVVUG00000014358	PPARGC1B	53	55.725	Vulpes_vulpes
ENSSFOG00015001633	ppargc1a	86	63.563	ENSVVUG00000013365	PPARGC1A	50	72.316	Vulpes_vulpes
ENSSFOG00015001633	ppargc1a	85	64.730	ENSXETG00000020468	ppargc1a	52	70.621	Xenopus_tropicalis
ENSSFOG00015001633	ppargc1a	78	37.306	ENSXETG00000012711	ppargc1b	63	41.081	Xenopus_tropicalis
ENSSFOG00015001633	ppargc1a	84	72.269	ENSXCOG00000004835	ppargc1a	92	75.221	Xiphophorus_couchianus
ENSSFOG00015001633	ppargc1a	82	71.849	ENSXMAG00000007748	ppargc1a	71	74.779	Xiphophorus_maculatus