EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015001872 (Gene tree)
Gene ID: 108938681
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 11300 bases
Position: chrKV411175.1:3661864-3673163
Accession: 108938681
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015002968	MIF4G_like	PF09088.11	3.6e-37	1	1
ENSSFOP00015002945	MIF4G_like	PF09088.11	5.4e-37	1	1
ENSSFOP00015002968	MIF4G_like_2	PF09090.11	2.9e-88	1	1
ENSSFOP00015002945	MIF4G_like_2	PF09090.11	1.3e-87	1	1
ENSSFOP00015002968	MIF4G	PF02854.19	1.8e-26	1	1
ENSSFOP00015002945	MIF4G	PF02854.19	2.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015002991	NCBP1-201	3213	-	ENSSFOP00015002945	944 (aa)	-	-
ENSSFOT00015003014	NCBP1-202	2343	XM_018759507	ENSSFOP00015002968	780 (aa)	XP_018615023	-

Gene Model

Click here to download ENSSFOG00015001872's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03013	RNA transport	KEGG
sfm03015	mRNA surveillance pathway	KEGG
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001872's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015001872	NCBP1	100	80.380	ENSG00000136937	NCBP1	99	81.386	Homo_sapiens
ENSSFOG00015001872	NCBP1	99	86.381	ENSAPOG00000008002	NCBP1	98	87.356	Acanthochromis_polyacanthus
ENSSFOG00015001872	NCBP1	100	80.682	ENSAMEG00000004763	NCBP1	98	81.538	Ailuropoda_melanoleuca
ENSSFOG00015001872	NCBP1	99	86.381	ENSACIG00000000274	NCBP1	98	87.340	Amphilophus_citrinellus
ENSSFOG00015001872	NCBP1	99	86.272	ENSAOCG00000021148	NCBP1	98	87.101	Amphiprion_ocellaris
ENSSFOG00015001872	NCBP1	99	86.272	ENSAPEG00000001701	NCBP1	98	87.101	Amphiprion_percula
ENSSFOG00015001872	NCBP1	99	86.398	ENSATEG00000006929	NCBP1	98	87.229	Anabas_testudineus
ENSSFOG00015001872	NCBP1	96	81.770	ENSAPLG00000016318	NCBP1	100	81.902	Anas_platyrhynchos
ENSSFOG00015001872	NCBP1	100	80.649	ENSACAG00000004409	NCBP1	86	81.115	Anolis_carolinensis
ENSSFOG00015001872	NCBP1	96	81.575	ENSANAG00000025744	NCBP1	99	80.999	Aotus_nancymaae
ENSSFOG00015001872	NCBP1	99	85.516	ENSACLG00000014812	NCBP1	99	85.694	Astatotilapia_calliptera
ENSSFOG00015001872	NCBP1	99	85.930	ENSAMXG00000016364	NCBP1	98	86.752	Astyanax_mexicanus
ENSSFOG00015001872	NCBP1	100	80.886	ENSBTAG00000009732	NCBP1	96	85.938	Bos_taurus
ENSSFOG00015001872	NCBP1	99	35.468	WBGene00018156	ncbp-1	98	35.338	Caenorhabditis_elegans
ENSSFOG00015001872	NCBP1	100	80.691	ENSCJAG00000010840	NCBP1	96	86.070	Callithrix_jacchus
ENSSFOG00015001872	NCBP1	100	80.886	ENSCAFG00000002445	NCBP1	99	81.643	Canis_familiaris
ENSSFOG00015001872	NCBP1	99	81.154	ENSCAFG00020017997	NCBP1	96	86.534	Canis_lupus_dingo
ENSSFOG00015001872	NCBP1	100	81.013	ENSCHIG00000020139	NCBP1	99	81.772	Capra_hircus
ENSSFOG00015001872	NCBP1	51	85.930	ENSTSYG00000011914	NCBP1	98	85.266	Carlito_syrichta
ENSSFOG00015001872	NCBP1	82	73.709	ENSCAPG00000014252	NCBP1	90	73.709	Cavia_aperea
ENSSFOG00015001872	NCBP1	96	80.876	ENSCPOG00000012573	NCBP1	99	80.876	Cavia_porcellus
ENSSFOG00015001872	NCBP1	100	80.818	ENSCCAG00000032297	NCBP1	99	81.386	Cebus_capucinus
ENSSFOG00015001872	NCBP1	100	80.380	ENSCATG00000010052	NCBP1	99	81.386	Cercocebus_atys
ENSSFOG00015001872	NCBP1	100	80.633	ENSCLAG00000014339	NCBP1	99	81.386	Chinchilla_lanigera
ENSSFOG00015001872	NCBP1	100	80.380	ENSCSAG00000010929	NCBP1	99	81.386	Chlorocebus_sabaeus
ENSSFOG00015001872	NCBP1	90	82.243	ENSCHOG00000010332	NCBP1	90	76.271	Choloepus_hoffmanni
ENSSFOG00015001872	NCBP1	100	78.841	ENSCPBG00000024344	NCBP1	99	81.543	Chrysemys_picta_bellii
ENSSFOG00015001872	NCBP1	99	56.122	ENSCING00000008990	-	98	55.711	Ciona_intestinalis
ENSSFOG00015001872	NCBP1	99	54.626	ENSCSAVG00000005300	-	99	54.167	Ciona_savignyi
ENSSFOG00015001872	NCBP1	100	80.380	ENSCANG00000036913	NCBP1	99	81.386	Colobus_angolensis_palliatus
ENSSFOG00015001872	NCBP1	100	80.000	ENSCGRG00001015771	Ncbp1	99	80.357	Cricetulus_griseus_chok1gshd
ENSSFOG00015001872	NCBP1	99	80.670	ENSCGRG00000010311	Ncbp1	99	80.745	Cricetulus_griseus_crigri
ENSSFOG00015001872	NCBP1	99	85.894	ENSCSEG00000012377	NCBP1	99	86.134	Cynoglossus_semilaevis
ENSSFOG00015001872	NCBP1	99	83.648	ENSCVAG00000008795	NCBP1	98	85.587	Cyprinodon_variegatus
ENSSFOG00015001872	NCBP1	100	80.253	ENSDNOG00000006885	NCBP1	100	80.234	Dasypus_novemcinctus
ENSSFOG00015001872	NCBP1	100	76.448	ENSDORG00000013652	Ncbp1	99	77.139	Dipodomys_ordii
ENSSFOG00015001872	NCBP1	82	34.644	FBgn0038887	CG7907	86	34.535	Drosophila_melanogaster
ENSSFOG00015001872	NCBP1	100	56.716	FBgn0022942	Cbp80	98	57.781	Drosophila_melanogaster
ENSSFOG00015001872	NCBP1	89	76.201	ENSETEG00000009705	NCBP1	88	76.201	Echinops_telfairi
ENSSFOG00015001872	NCBP1	100	72.327	ENSEBUG00000008386	NCBP1	98	72.797	Eptatretus_burgeri
ENSSFOG00015001872	NCBP1	100	80.380	ENSEASG00005022795	NCBP1	99	81.130	Equus_asinus_asinus
ENSSFOG00015001872	NCBP1	100	80.506	ENSECAG00000013847	NCBP1	99	81.258	Equus_caballus
ENSSFOG00015001872	NCBP1	96	76.689	ENSEEUG00000015973	NCBP1	99	77.419	Erinaceus_europaeus
ENSSFOG00015001872	NCBP1	99	86.792	ENSELUG00000022519	NCBP1	98	87.500	Esox_lucius
ENSSFOG00015001872	NCBP1	100	80.759	ENSFCAG00000001206	NCBP1	99	81.515	Felis_catus
ENSSFOG00015001872	NCBP1	99	82.270	ENSFALG00000001193	NCBP1	100	82.443	Ficedula_albicollis
ENSSFOG00015001872	NCBP1	100	80.633	ENSFDAG00000010864	NCBP1	100	80.506	Fukomys_damarensis
ENSSFOG00015001872	NCBP1	99	84.403	ENSFHEG00000000655	NCBP1	98	85.204	Fundulus_heteroclitus
ENSSFOG00015001872	NCBP1	99	84.528	ENSGMOG00000008653	NCBP1	98	85.332	Gadus_morhua
ENSSFOG00015001872	NCBP1	99	83.012	ENSGALG00000002087	NCBP1	98	82.843	Gallus_gallus
ENSSFOG00015001872	NCBP1	99	85.409	ENSGAFG00000017787	NCBP1	98	86.097	Gambusia_affinis
ENSSFOG00015001872	NCBP1	99	85.194	ENSGACG00000016772	NCBP1	97	85.987	Gasterosteus_aculeatus
ENSSFOG00015001872	NCBP1	99	82.586	ENSGAGG00000019483	NCBP1	99	82.781	Gopherus_agassizii
ENSSFOG00015001872	NCBP1	100	80.563	ENSGGOG00000001376	NCBP1	99	81.386	Gorilla_gorilla
ENSSFOG00015001872	NCBP1	99	85.516	ENSHBUG00000020843	NCBP1	98	86.335	Haplochromis_burtoni
ENSSFOG00015001872	NCBP1	100	69.975	ENSHGLG00000018112	-	99	70.828	Heterocephalus_glaber_female
ENSSFOG00015001872	NCBP1	100	80.633	ENSHGLG00000001882	NCBP1	99	81.386	Heterocephalus_glaber_female
ENSSFOG00015001872	NCBP1	100	80.633	ENSHGLG00100013014	NCBP1	99	81.386	Heterocephalus_glaber_male
ENSSFOG00015001872	NCBP1	100	69.724	ENSHGLG00100017373	-	99	70.573	Heterocephalus_glaber_male
ENSSFOG00015001872	NCBP1	75	80.743	ENSHCOG00000000204	NCBP1	87	80.743	Hippocampus_comes
ENSSFOG00015001872	NCBP1	99	86.918	ENSIPUG00000007275	ncbp1	98	87.755	Ictalurus_punctatus
ENSSFOG00015001872	NCBP1	100	80.506	ENSSTOG00000002695	NCBP1	99	81.258	Ictidomys_tridecemlineatus
ENSSFOG00015001872	NCBP1	99	85.390	ENSKMAG00000003594	NCBP1	97	87.917	Kryptolebias_marmoratus
ENSSFOG00015001872	NCBP1	99	84.224	ENSLBEG00000011661	NCBP1	99	85.013	Labrus_bergylta
ENSSFOG00015001872	NCBP1	99	76.738	ENSLACG00000013955	NCBP1	98	77.089	Latimeria_chalumnae
ENSSFOG00015001872	NCBP1	99	75.686	ENSLOCG00000009579	NCBP1	99	76.485	Lepisosteus_oculatus
ENSSFOG00015001872	NCBP1	100	80.380	ENSLAFG00000005999	NCBP1	99	81.130	Loxodonta_africana
ENSSFOG00015001872	NCBP1	100	80.380	ENSMFAG00000030994	NCBP1	99	81.386	Macaca_fascicularis
ENSSFOG00015001872	NCBP1	99	81.057	ENSMMUG00000012281	NCBP1	99	81.386	Macaca_mulatta
ENSSFOG00015001872	NCBP1	100	80.380	ENSMNEG00000042790	NCBP1	99	81.386	Macaca_nemestrina
ENSSFOG00015001872	NCBP1	100	80.380	ENSMLEG00000030374	NCBP1	99	81.386	Mandrillus_leucophaeus
ENSSFOG00015001872	NCBP1	99	87.163	ENSMAMG00000014806	NCBP1	99	86.929	Mastacembelus_armatus
ENSSFOG00015001872	NCBP1	98	85.379	ENSMZEG00005009290	-	99	85.379	Maylandia_zebra
ENSSFOG00015001872	NCBP1	99	85.516	ENSMZEG00005003469	NCBP1	98	86.335	Maylandia_zebra
ENSSFOG00015001872	NCBP1	99	80.670	ENSMAUG00000020583	Ncbp1	99	80.616	Mesocricetus_auratus
ENSSFOG00015001872	NCBP1	100	80.253	ENSMICG00000012682	NCBP1	99	81.001	Microcebus_murinus
ENSSFOG00015001872	NCBP1	100	80.380	ENSMOCG00000015818	Ncbp1	100	80.051	Microtus_ochrogaster
ENSSFOG00015001872	NCBP1	91	85.294	ENSMMOG00000002610	NCBP1	99	85.294	Mola_mola
ENSSFOG00015001872	NCBP1	100	80.203	ENSMODG00000003202	NCBP1	97	80.884	Monodelphis_domestica
ENSSFOG00015001872	NCBP1	99	85.768	ENSMALG00000003547	NCBP1	98	86.590	Monopterus_albus
ENSSFOG00015001872	NCBP1	100	80.127	MGP_CAROLIEiJ_G0025982	Ncbp1	99	80.485	Mus_caroli
ENSSFOG00015001872	NCBP1	100	80.127	ENSMUSG00000028330	Ncbp1	99	80.485	Mus_musculus
ENSSFOG00015001872	NCBP1	100	80.127	MGP_PahariEiJ_G0028318	Ncbp1	99	80.485	Mus_pahari
ENSSFOG00015001872	NCBP1	100	80.127	MGP_SPRETEiJ_G0026945	Ncbp1	99	80.485	Mus_spretus
ENSSFOG00015001872	NCBP1	100	81.013	ENSMPUG00000006399	NCBP1	99	81.772	Mustela_putorius_furo
ENSSFOG00015001872	NCBP1	99	80.258	ENSMLUG00000015201	NCBP1	100	80.103	Myotis_lucifugus
ENSSFOG00015001872	NCBP1	100	80.380	ENSNGAG00000014101	Ncbp1	99	81.130	Nannospalax_galili
ENSSFOG00015001872	NCBP1	77	85.903	ENSNBRG00000014674	NCBP1	96	88.889	Neolamprologus_brichardi
ENSSFOG00015001872	NCBP1	100	80.563	ENSNLEG00000016909	NCBP1	99	81.386	Nomascus_leucogenys
ENSSFOG00015001872	NCBP1	90	79.916	ENSMEUG00000010672	NCBP1	90	79.958	Notamacropus_eugenii
ENSSFOG00015001872	NCBP1	80	85.294	ENSOPRG00000002144	-	83	85.294	Ochotona_princeps
ENSSFOG00015001872	NCBP1	100	80.253	ENSODEG00000003232	NCBP1	99	81.258	Octodon_degus
ENSSFOG00015001872	NCBP1	99	85.642	ENSONIG00000001502	NCBP1	98	86.462	Oreochromis_niloticus
ENSSFOG00015001872	NCBP1	79	83.092	ENSOANG00000001918	NCBP1	100	83.307	Ornithorhynchus_anatinus
ENSSFOG00015001872	NCBP1	98	80.000	ENSOCUG00000013853	NCBP1	95	80.971	Oryctolagus_cuniculus
ENSSFOG00015001872	NCBP1	99	84.962	ENSORLG00000011008	NCBP1	98	85.769	Oryzias_latipes
ENSSFOG00015001872	NCBP1	99	84.837	ENSORLG00020017455	NCBP1	98	85.642	Oryzias_latipes_hni
ENSSFOG00015001872	NCBP1	99	84.962	ENSORLG00015012127	NCBP1	98	85.769	Oryzias_latipes_hsok
ENSSFOG00015001872	NCBP1	99	85.088	ENSOMEG00000020698	NCBP1	98	85.896	Oryzias_melastigma
ENSSFOG00015001872	NCBP1	100	80.556	ENSOGAG00000013888	NCBP1	98	81.515	Otolemur_garnettii
ENSSFOG00015001872	NCBP1	100	81.013	ENSOARG00000011233	NCBP1	99	81.772	Ovis_aries
ENSSFOG00015001872	NCBP1	100	80.563	ENSPPAG00000026462	NCBP1	99	81.386	Pan_paniscus
ENSSFOG00015001872	NCBP1	100	80.886	ENSPPRG00000022574	NCBP1	99	81.643	Panthera_pardus
ENSSFOG00015001872	NCBP1	100	80.886	ENSPTIG00000018507	NCBP1	99	81.643	Panthera_tigris_altaica
ENSSFOG00015001872	NCBP1	100	80.563	ENSPTRG00000021167	NCBP1	99	81.386	Pan_troglodytes
ENSSFOG00015001872	NCBP1	100	80.380	ENSPANG00000025591	NCBP1	99	81.386	Papio_anubis
ENSSFOG00015001872	NCBP1	100	87.154	ENSPKIG00000015861	NCBP1	99	88.903	Paramormyrops_kingsleyae
ENSSFOG00015001872	NCBP1	65	80.469	ENSPSIG00000009558	NCBP1	100	80.859	Pelodiscus_sinensis
ENSSFOG00015001872	NCBP1	99	82.116	ENSPMGG00000020476	NCBP1	98	82.886	Periophthalmus_magnuspinnatus
ENSSFOG00015001872	NCBP1	100	80.127	ENSPEMG00000020105	Ncbp1	99	80.745	Peromyscus_maniculatus_bairdii
ENSSFOG00015001872	NCBP1	100	67.669	ENSPMAG00000005533	NCBP1	98	68.153	Petromyzon_marinus
ENSSFOG00015001872	NCBP1	100	80.076	ENSPCIG00000015800	NCBP1	97	80.841	Phascolarctos_cinereus
ENSSFOG00015001872	NCBP1	99	84.837	ENSPFOG00000004158	NCBP1	98	85.515	Poecilia_formosa
ENSSFOG00015001872	NCBP1	99	85.283	ENSPLAG00000020002	NCBP1	98	85.969	Poecilia_latipinna
ENSSFOG00015001872	NCBP1	99	85.157	ENSPMEG00000019821	NCBP1	98	85.842	Poecilia_mexicana
ENSSFOG00015001872	NCBP1	99	85.302	ENSPREG00000006035	NCBP1	98	85.987	Poecilia_reticulata
ENSSFOG00015001872	NCBP1	100	80.380	ENSPPYG00000019426	NCBP1	99	81.386	Pongo_abelii
ENSSFOG00015001872	NCBP1	85	85.862	ENSPCAG00000009943	NCBP1	85	85.862	Procavia_capensis
ENSSFOG00015001872	NCBP1	82	83.553	ENSPCOG00000020024	NCBP1	98	83.553	Propithecus_coquereli
ENSSFOG00015001872	NCBP1	100	80.506	ENSPVAG00000005924	NCBP1	99	81.258	Pteropus_vampyrus
ENSSFOG00015001872	NCBP1	91	85.694	ENSPNYG00000002140	NCBP1	99	85.694	Pundamilia_nyererei
ENSSFOG00015001872	NCBP1	99	86.935	ENSPNAG00000027753	NCBP1	99	87.222	Pygocentrus_nattereri
ENSSFOG00015001872	NCBP1	100	80.127	ENSRNOG00000023605	Ncbp1	99	80.485	Rattus_norvegicus
ENSSFOG00015001872	NCBP1	100	80.380	ENSRBIG00000043175	NCBP1	99	81.386	Rhinopithecus_bieti
ENSSFOG00015001872	NCBP1	100	80.380	ENSRROG00000029767	NCBP1	99	81.386	Rhinopithecus_roxellana
ENSSFOG00015001872	NCBP1	100	80.633	ENSSBOG00000019378	NCBP1	96	86.070	Saimiri_boliviensis_boliviensis
ENSSFOG00015001872	NCBP1	99	56.051	ENSSHAG00000015882	NCBP1	98	55.811	Sarcophilus_harrisii
ENSSFOG00015001872	NCBP1	99	84.887	ENSSMAG00000007463	NCBP1	98	85.696	Scophthalmus_maximus
ENSSFOG00015001872	NCBP1	99	86.168	ENSSDUG00000007019	NCBP1	98	87.130	Seriola_dumerili
ENSSFOG00015001872	NCBP1	99	86.146	ENSSLDG00000021924	NCBP1	98	87.101	Seriola_lalandi_dorsalis
ENSSFOG00015001872	NCBP1	86	71.179	ENSSARG00000007274	NCBP1	87	71.179	Sorex_araneus
ENSSFOG00015001872	NCBP1	100	76.076	ENSSPUG00000008609	NCBP1	99	76.508	Sphenodon_punctatus
ENSSFOG00015001872	NCBP1	99	86.524	ENSSPAG00000012550	NCBP1	98	87.356	Stegastes_partitus
ENSSFOG00015001872	NCBP1	100	80.886	ENSSSCG00000005366	NCBP1	99	81.643	Sus_scrofa
ENSSFOG00015001872	NCBP1	100	76.981	ENSTGUG00000001472	NCBP1	99	77.679	Taeniopygia_guttata
ENSSFOG00015001872	NCBP1	99	85.013	ENSTRUG00000005287	NCBP1	98	85.951	Takifugu_rubripes
ENSSFOG00015001872	NCBP1	100	78.228	ENSTBEG00000004035	NCBP1	99	78.947	Tupaia_belangeri
ENSSFOG00015001872	NCBP1	88	79.803	ENSTTRG00000000507	NCBP1	86	82.812	Tursiops_truncatus
ENSSFOG00015001872	NCBP1	100	80.759	ENSUAMG00000005471	NCBP1	99	81.515	Ursus_americanus
ENSSFOG00015001872	NCBP1	98	79.557	ENSUMAG00000011865	NCBP1	100	80.966	Ursus_maritimus
ENSSFOG00015001872	NCBP1	100	77.089	ENSVPAG00000010537	NCBP1	99	77.792	Vicugna_pacos
ENSSFOG00015001872	NCBP1	100	80.886	ENSVVUG00000019725	NCBP1	99	81.643	Vulpes_vulpes
ENSSFOG00015001872	NCBP1	100	77.876	ENSXETG00000010179	ncbp1	99	78.333	Xenopus_tropicalis
ENSSFOG00015001872	NCBP1	99	85.157	ENSXMAG00000018253	NCBP1	98	85.842	Xiphophorus_maculatus