EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015002019 (Gene tree)
Gene ID: 108920738
Gene Symbol: cnot4a
Alias: -
Full Name: CCR4-NOT transcription complex subunit 4-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 10803 bases
Position: chrKV411299.1:6153287-6164089
Accession: 108920738
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015003178	RRM_1	PF00076.22	2.3e-05	1	1
ENSSFOP00015003134	RRM_1	PF00076.22	3.3e-05	1	1
ENSSFOP00015003171	RRM_1	PF00076.22	3.3e-05	1	1
ENSSFOP00015003167	RRM_1	PF00076.22	3.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015003230	-	1836	-	ENSSFOP00015003178	611 (aa)	-	-
ENSSFOT00015003185	-	4138	-	ENSSFOP00015003134	763 (aa)	-	-
ENSSFOT00015003222	-	4027	-	ENSSFOP00015003171	763 (aa)	-	-
ENSSFOT00015003218	-	4020	XM_018729743	ENSSFOP00015003167	793 (aa)	XP_018585259	A0A1W4Y0D8

Gene Model

Click here to download ENSSFOG00015002019's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015002019's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015002019	cnot4a	100	91.039	ENSSFOG00015017285	CNOT4	100	91.039

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015002019	cnot4a	91	90.074	ENSG00000080802	CNOT4	100	90.074	Homo_sapiens
ENSSFOG00015002019	cnot4a	94	91.481	ENSAPOG00000016272	cnot4a	95	79.151	Acanthochromis_polyacanthus
ENSSFOG00015002019	cnot4a	91	89.767	ENSAMEG00000012081	CNOT4	89	92.195	Ailuropoda_melanoleuca
ENSSFOG00015002019	cnot4a	99	72.125	ENSACIG00000003011	cnot4a	88	91.538	Amphilophus_citrinellus
ENSSFOG00015002019	cnot4a	100	91.852	ENSAOCG00000010792	cnot4a	100	76.434	Amphiprion_ocellaris
ENSSFOG00015002019	cnot4a	100	91.852	ENSAPEG00000004680	cnot4a	100	76.434	Amphiprion_percula
ENSSFOG00015002019	cnot4a	100	91.111	ENSATEG00000017580	cnot4a	88	91.154	Anabas_testudineus
ENSSFOG00015002019	cnot4a	99	69.543	ENSAPLG00000016441	CNOT4	100	69.543	Anas_platyrhynchos
ENSSFOG00015002019	cnot4a	99	69.543	ENSACAG00000011154	CNOT4	100	69.543	Anolis_carolinensis
ENSSFOG00015002019	cnot4a	91	90.074	ENSANAG00000032156	CNOT4	100	90.074	Aotus_nancymaae
ENSSFOG00015002019	cnot4a	100	91.481	ENSACLG00000002514	cnot4a	88	91.538	Astatotilapia_calliptera
ENSSFOG00015002019	cnot4a	93	89.123	ENSAMXG00000011473	cnot4b	83	93.846	Astyanax_mexicanus
ENSSFOG00015002019	cnot4a	100	88.070	ENSAMXG00000001373	cnot4a	100	87.241	Astyanax_mexicanus
ENSSFOG00015002019	cnot4a	100	72.910	ENSBTAG00000017919	CNOT4	99	90.406	Bos_taurus
ENSSFOG00015002019	cnot4a	91	90.074	ENSCJAG00000012532	CNOT4	100	90.074	Callithrix_jacchus
ENSSFOG00015002019	cnot4a	91	90.074	ENSCAFG00000003223	CNOT4	100	90.074	Canis_familiaris
ENSSFOG00015002019	cnot4a	84	90.074	ENSCAFG00020000093	CNOT4	100	90.074	Canis_lupus_dingo
ENSSFOG00015002019	cnot4a	91	90.406	ENSCHIG00000010955	CNOT4	99	90.406	Capra_hircus
ENSSFOG00015002019	cnot4a	91	90.074	ENSTSYG00000000893	CNOT4	100	90.074	Carlito_syrichta
ENSSFOG00015002019	cnot4a	100	72.136	ENSCAPG00000006213	CNOT4	100	72.136	Cavia_aperea
ENSSFOG00015002019	cnot4a	100	73.529	ENSCPOG00000011526	CNOT4	100	73.529	Cavia_porcellus
ENSSFOG00015002019	cnot4a	100	72.910	ENSCCAG00000024414	CNOT4	99	90.406	Cebus_capucinus
ENSSFOG00015002019	cnot4a	100	73.065	ENSCATG00000022607	CNOT4	99	90.406	Cercocebus_atys
ENSSFOG00015002019	cnot4a	100	74.339	ENSCLAG00000001857	CNOT4	100	74.495	Chinchilla_lanigera
ENSSFOG00015002019	cnot4a	91	90.074	ENSCSAG00000009096	CNOT4	100	90.074	Chlorocebus_sabaeus
ENSSFOG00015002019	cnot4a	64	93.048	ENSCHOG00000010412	CNOT4	67	93.048	Choloepus_hoffmanni
ENSSFOG00015002019	cnot4a	91	90.406	ENSCPBG00000004959	CNOT4	99	90.406	Chrysemys_picta_bellii
ENSSFOG00015002019	cnot4a	61	70.325	ENSCING00000004364	-	66	70.325	Ciona_intestinalis
ENSSFOG00015002019	cnot4a	100	72.910	ENSCANG00000029319	CNOT4	99	90.406	Colobus_angolensis_palliatus
ENSSFOG00015002019	cnot4a	91	90.074	ENSCGRG00001014651	Cnot4	100	90.074	Cricetulus_griseus_chok1gshd
ENSSFOG00015002019	cnot4a	91	90.074	ENSCGRG00000005727	Cnot4	100	90.074	Cricetulus_griseus_crigri
ENSSFOG00015002019	cnot4a	94	91.481	ENSCSEG00000015080	cnot4a	94	83.828	Cynoglossus_semilaevis
ENSSFOG00015002019	cnot4a	100	90.741	ENSCVAG00000009399	cnot4a	87	93.676	Cyprinodon_variegatus
ENSSFOG00015002019	cnot4a	100	90.323	ENSDARG00000007639	cnot4b	83	93.462	Danio_rerio
ENSSFOG00015002019	cnot4a	100	89.247	ENSDARG00000007045	cnot4a	89	91.860	Danio_rerio
ENSSFOG00015002019	cnot4a	99	66.454	ENSDNOG00000009409	CNOT4	99	90.775	Dasypus_novemcinctus
ENSSFOG00015002019	cnot4a	100	73.839	ENSDORG00000012268	Cnot4	100	73.684	Dipodomys_ordii
ENSSFOG00015002019	cnot4a	87	85.609	ENSETEG00000013407	CNOT4	90	85.609	Echinops_telfairi
ENSSFOG00015002019	cnot4a	100	73.220	ENSEASG00005014430	CNOT4	99	90.406	Equus_asinus_asinus
ENSSFOG00015002019	cnot4a	91	90.406	ENSECAG00000020262	CNOT4	99	90.406	Equus_caballus
ENSSFOG00015002019	cnot4a	99	88.727	ENSELUG00000008742	cnot4a	100	83.849	Esox_lucius
ENSSFOG00015002019	cnot4a	100	77.612	ENSELUG00000011540	cnot4b	100	87.956	Esox_lucius
ENSSFOG00015002019	cnot4a	91	90.074	ENSFCAG00000011904	CNOT4	100	90.074	Felis_catus
ENSSFOG00015002019	cnot4a	99	69.670	ENSFALG00000011194	CNOT4	100	69.670	Ficedula_albicollis
ENSSFOG00015002019	cnot4a	91	90.074	ENSFDAG00000013525	CNOT4	100	90.074	Fukomys_damarensis
ENSSFOG00015002019	cnot4a	100	91.111	ENSFHEG00000006608	cnot4a	88	91.538	Fundulus_heteroclitus
ENSSFOG00015002019	cnot4a	95	82.653	ENSGMOG00000001329	cnot4a	95	76.758	Gadus_morhua
ENSSFOG00015002019	cnot4a	91	90.406	ENSGALG00000011682	CNOT4	99	90.406	Gallus_gallus
ENSSFOG00015002019	cnot4a	100	90.741	ENSGACG00000004276	cnot4a	89	91.154	Gasterosteus_aculeatus
ENSSFOG00015002019	cnot4a	91	90.406	ENSGAGG00000017331	CNOT4	99	90.406	Gopherus_agassizii
ENSSFOG00015002019	cnot4a	84	88.991	ENSGGOG00000000142	CNOT4	99	88.991	Gorilla_gorilla
ENSSFOG00015002019	cnot4a	100	91.481	ENSHBUG00000000027	cnot4a	88	91.538	Haplochromis_burtoni
ENSSFOG00015002019	cnot4a	91	90.074	ENSHGLG00000011533	CNOT4	100	90.074	Heterocephalus_glaber_female
ENSSFOG00015002019	cnot4a	84	74.359	ENSHGLG00100013058	CNOT4	94	74.176	Heterocephalus_glaber_male
ENSSFOG00015002019	cnot4a	96	90.370	ENSHCOG00000015815	cnot4a	97	75.223	Hippocampus_comes
ENSSFOG00015002019	cnot4a	100	89.606	ENSIPUG00000016994	cnot4b	100	89.964	Ictalurus_punctatus
ENSSFOG00015002019	cnot4a	100	90.741	ENSIPUG00000006393	cnot4	100	86.207	Ictalurus_punctatus
ENSSFOG00015002019	cnot4a	100	73.406	ENSSTOG00000007717	CNOT4	100	73.717	Ictidomys_tridecemlineatus
ENSSFOG00015002019	cnot4a	91	90.074	ENSJJAG00000016618	Cnot4	100	90.074	Jaculus_jaculus
ENSSFOG00015002019	cnot4a	68	86.765	ENSJJAG00000019991	-	94	86.765	Jaculus_jaculus
ENSSFOG00015002019	cnot4a	94	91.111	ENSKMAG00000004581	cnot4a	100	74.184	Kryptolebias_marmoratus
ENSSFOG00015002019	cnot4a	100	90.741	ENSLBEG00000009999	cnot4a	87	93.281	Labrus_bergylta
ENSSFOG00015002019	cnot4a	99	71.429	ENSLACG00000002647	CNOT4	99	71.429	Latimeria_chalumnae
ENSSFOG00015002019	cnot4a	99	76.178	ENSLOCG00000016126	cnot4a	100	76.178	Lepisosteus_oculatus
ENSSFOG00015002019	cnot4a	91	90.406	ENSLAFG00000000709	CNOT4	99	90.406	Loxodonta_africana
ENSSFOG00015002019	cnot4a	91	90.074	ENSMFAG00000046349	CNOT4	100	90.074	Macaca_fascicularis
ENSSFOG00015002019	cnot4a	100	73.065	ENSMMUG00000016181	CNOT4	99	90.406	Macaca_mulatta
ENSSFOG00015002019	cnot4a	84	90.074	ENSMNEG00000042164	CNOT4	100	90.074	Macaca_nemestrina
ENSSFOG00015002019	cnot4a	100	73.065	ENSMLEG00000032709	CNOT4	99	90.406	Mandrillus_leucophaeus
ENSSFOG00015002019	cnot4a	100	91.481	ENSMAMG00000023194	cnot4a	83	91.538	Mastacembelus_armatus
ENSSFOG00015002019	cnot4a	100	91.481	ENSMZEG00005007312	cnot4a	88	91.538	Maylandia_zebra
ENSSFOG00015002019	cnot4a	99	69.416	ENSMGAG00000011788	CNOT4	100	69.416	Meleagris_gallopavo
ENSSFOG00015002019	cnot4a	91	90.074	ENSMAUG00000020415	Cnot4	100	90.074	Mesocricetus_auratus
ENSSFOG00015002019	cnot4a	100	73.220	ENSMICG00000001667	CNOT4	99	90.406	Microcebus_murinus
ENSSFOG00015002019	cnot4a	91	90.074	ENSMOCG00000020955	Cnot4	100	90.074	Microtus_ochrogaster
ENSSFOG00015002019	cnot4a	91	78.163	ENSMMOG00000014565	cnot4a	95	78.163	Mola_mola
ENSSFOG00015002019	cnot4a	91	90.074	ENSMODG00000014068	CNOT4	100	90.074	Monodelphis_domestica
ENSSFOG00015002019	cnot4a	93	91.111	ENSMALG00000011662	cnot4a	73	91.538	Monopterus_albus
ENSSFOG00015002019	cnot4a	91	90.074	MGP_CAROLIEiJ_G0028217	Cnot4	100	90.074	Mus_caroli
ENSSFOG00015002019	cnot4a	91	90.074	ENSMUSG00000038784	Cnot4	100	90.074	Mus_musculus
ENSSFOG00015002019	cnot4a	91	90.074	MGP_PahariEiJ_G0021974	Cnot4	100	90.074	Mus_pahari
ENSSFOG00015002019	cnot4a	91	90.074	MGP_SPRETEiJ_G0029216	Cnot4	100	90.074	Mus_spretus
ENSSFOG00015002019	cnot4a	91	90.074	ENSMPUG00000004089	CNOT4	100	90.074	Mustela_putorius_furo
ENSSFOG00015002019	cnot4a	84	90.406	ENSMLUG00000008260	CNOT4	99	90.406	Myotis_lucifugus
ENSSFOG00015002019	cnot4a	91	90.074	ENSNGAG00000015030	Cnot4	100	90.074	Nannospalax_galili
ENSSFOG00015002019	cnot4a	93	81.754	ENSNBRG00000021144	cnot4a	100	72.036	Neolamprologus_brichardi
ENSSFOG00015002019	cnot4a	100	73.065	ENSNLEG00000013352	CNOT4	99	90.406	Nomascus_leucogenys
ENSSFOG00015002019	cnot4a	85	67.965	ENSOPRG00000001023	CNOT4	82	67.965	Ochotona_princeps
ENSSFOG00015002019	cnot4a	100	73.529	ENSODEG00000012975	CNOT4	100	90.074	Octodon_degus
ENSSFOG00015002019	cnot4a	100	91.481	ENSONIG00000008656	cnot4a	88	91.538	Oreochromis_niloticus
ENSSFOG00015002019	cnot4a	91	90.074	ENSOANG00000005006	CNOT4	100	90.074	Ornithorhynchus_anatinus
ENSSFOG00015002019	cnot4a	91	90.074	ENSOCUG00000013448	CNOT4	100	90.074	Oryctolagus_cuniculus
ENSSFOG00015002019	cnot4a	89	87.368	ENSORLG00000003727	cnot4a	100	74.290	Oryzias_latipes
ENSSFOG00015002019	cnot4a	93	87.719	ENSORLG00020015684	cnot4a	100	73.798	Oryzias_latipes_hni
ENSSFOG00015002019	cnot4a	93	87.719	ENSORLG00015008470	cnot4a	100	74.367	Oryzias_latipes_hsok
ENSSFOG00015002019	cnot4a	100	73.534	ENSOMEG00000011084	cnot4a	100	73.968	Oryzias_melastigma
ENSSFOG00015002019	cnot4a	99	66.242	ENSOGAG00000015499	CNOT4	99	90.406	Otolemur_garnettii
ENSSFOG00015002019	cnot4a	91	90.406	ENSOARG00000008803	CNOT4	99	90.406	Ovis_aries
ENSSFOG00015002019	cnot4a	100	73.065	ENSPPAG00000041937	CNOT4	99	90.406	Pan_paniscus
ENSSFOG00015002019	cnot4a	100	73.375	ENSPPRG00000023940	CNOT4	99	90.406	Panthera_pardus
ENSSFOG00015002019	cnot4a	91	90.074	ENSPTIG00000016601	CNOT4	100	90.074	Panthera_tigris_altaica
ENSSFOG00015002019	cnot4a	100	73.065	ENSPTRG00000019727	CNOT4	99	90.406	Pan_troglodytes
ENSSFOG00015002019	cnot4a	100	72.910	ENSPANG00000017724	CNOT4	99	90.406	Papio_anubis
ENSSFOG00015002019	cnot4a	100	80.360	ENSPKIG00000018137	cnot4a	100	91.575	Paramormyrops_kingsleyae
ENSSFOG00015002019	cnot4a	99	70.342	ENSPSIG00000011256	CNOT4	100	70.342	Pelodiscus_sinensis
ENSSFOG00015002019	cnot4a	100	74.962	ENSPMGG00000005671	cnot4a	100	74.962	Periophthalmus_magnuspinnatus
ENSSFOG00015002019	cnot4a	91	90.074	ENSPEMG00000021566	Cnot4	100	90.074	Peromyscus_maniculatus_bairdii
ENSSFOG00015002019	cnot4a	91	89.744	ENSPCIG00000029622	CNOT4	96	89.744	Phascolarctos_cinereus
ENSSFOG00015002019	cnot4a	100	91.111	ENSPFOG00000002228	cnot4a	88	91.538	Poecilia_formosa
ENSSFOG00015002019	cnot4a	100	91.111	ENSPLAG00000001780	cnot4a	88	91.538	Poecilia_latipinna
ENSSFOG00015002019	cnot4a	100	91.111	ENSPMEG00000006852	cnot4a	88	91.538	Poecilia_mexicana
ENSSFOG00015002019	cnot4a	100	91.111	ENSPREG00000008171	cnot4a	88	91.538	Poecilia_reticulata
ENSSFOG00015002019	cnot4a	91	90.074	ENSPPYG00000018026	CNOT4	100	90.074	Pongo_abelii
ENSSFOG00015002019	cnot4a	100	73.220	ENSPCOG00000019907	CNOT4	99	90.406	Propithecus_coquereli
ENSSFOG00015002019	cnot4a	94	65.276	ENSPVAG00000004905	CNOT4	93	69.016	Pteropus_vampyrus
ENSSFOG00015002019	cnot4a	100	91.481	ENSPNYG00000004276	cnot4a	88	91.538	Pundamilia_nyererei
ENSSFOG00015002019	cnot4a	100	90.681	ENSPNAG00000008679	cnot4b	83	94.231	Pygocentrus_nattereri
ENSSFOG00015002019	cnot4a	100	87.368	ENSPNAG00000020433	cnot4a	89	92.692	Pygocentrus_nattereri
ENSSFOG00015002019	cnot4a	91	90.074	ENSRNOG00000010795	Cnot4	100	90.074	Rattus_norvegicus
ENSSFOG00015002019	cnot4a	100	73.065	ENSRBIG00000043977	CNOT4	99	90.406	Rhinopithecus_bieti
ENSSFOG00015002019	cnot4a	100	73.561	ENSSBOG00000020808	CNOT4	96	84.967	Saimiri_boliviensis_boliviensis
ENSSFOG00015002019	cnot4a	91	90.074	ENSSHAG00000013639	CNOT4	100	90.074	Sarcophilus_harrisii
ENSSFOG00015002019	cnot4a	100	91.481	ENSSMAG00000008614	cnot4a	100	91.513	Scophthalmus_maximus
ENSSFOG00015002019	cnot4a	100	91.481	ENSSDUG00000022635	cnot4a	88	91.538	Seriola_dumerili
ENSSFOG00015002019	cnot4a	85	89.377	ENSSDUG00000018585	cnot4b	97	93.725	Seriola_dumerili
ENSSFOG00015002019	cnot4a	100	91.481	ENSSLDG00000015770	cnot4a	88	91.538	Seriola_lalandi_dorsalis
ENSSFOG00015002019	cnot4a	100	70.251	ENSSLDG00000014347	cnot4b	100	63.363	Seriola_lalandi_dorsalis
ENSSFOG00015002019	cnot4a	84	90.406	ENSSPUG00000004677	CNOT4	99	90.406	Sphenodon_punctatus
ENSSFOG00015002019	cnot4a	100	91.481	ENSSPAG00000012329	cnot4a	100	75.228	Stegastes_partitus
ENSSFOG00015002019	cnot4a	100	73.065	ENSSSCG00000021354	CNOT4	99	90.406	Sus_scrofa
ENSSFOG00015002019	cnot4a	99	69.670	ENSTGUG00000009161	CNOT4	100	69.670	Taeniopygia_guttata
ENSSFOG00015002019	cnot4a	100	90.741	ENSTRUG00000016861	cnot4a	83	91.923	Takifugu_rubripes
ENSSFOG00015002019	cnot4a	90	84.502	ENSTNIG00000016000	cnot4a	100	64.573	Tetraodon_nigroviridis
ENSSFOG00015002019	cnot4a	94	66.393	ENSTBEG00000002202	CNOT4	88	67.213	Tupaia_belangeri
ENSSFOG00015002019	cnot4a	94	72.474	ENSTTRG00000005122	CNOT4	90	90.775	Tursiops_truncatus
ENSSFOG00015002019	cnot4a	100	73.375	ENSUAMG00000026759	CNOT4	99	90.406	Ursus_americanus
ENSSFOG00015002019	cnot4a	90	90.406	ENSUMAG00000015351	CNOT4	95	90.406	Ursus_maritimus
ENSSFOG00015002019	cnot4a	91	90.406	ENSVVUG00000006200	CNOT4	100	90.074	Vulpes_vulpes
ENSSFOG00015002019	cnot4a	99	90.741	ENSXETG00000010594	cnot4	87	92.692	Xenopus_tropicalis
ENSSFOG00015002019	cnot4a	80	87.719	ENSXCOG00000020824	cnot4a	98	68.110	Xiphophorus_couchianus
ENSSFOG00015002019	cnot4a	100	90.741	ENSXMAG00000016984	cnot4a	88	91.538	Xiphophorus_maculatus