EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015002254 (Gene tree)
Gene ID: -
Gene Symbol: LARP6 (1 of many)
Alias: FLJ11196|acheron
Full Name: la-related protein 6-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 2867 bases
Position: chrKV410852.1:6553222-6556088
Accession: 108926247
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015003459	La	PF05383.17	6.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015003516	LARP6 (1 of many)-201	1431	XM_018738837	ENSSFOP00015003459	476 (aa)	XP_018594353	-

Gene Model

Click here to download ENSSFOG00015002254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015002254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015002254	LARP6	83	73.953	ENSSFOG00015023268	larp6a	92	69.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015002254	LARP6	91	52.321	ENSG00000166173	LARP6	95	51.782	Homo_sapiens
ENSSFOG00015002254	LARP6	92	73.375	ENSAPOG00000021773	larp6a	69	73.166	Acanthochromis_polyacanthus
ENSSFOG00015002254	LARP6	80	57.075	ENSAMEG00000008897	LARP6	97	55.660	Ailuropoda_melanoleuca
ENSSFOG00015002254	LARP6	92	73.069	ENSACIG00000005166	larp6a	94	71.399	Amphilophus_citrinellus
ENSSFOG00015002254	LARP6	100	69.171	ENSAOCG00000002284	larp6a	69	73.166	Amphiprion_ocellaris
ENSSFOG00015002254	LARP6	92	73.375	ENSAPEG00000008077	larp6a	92	73.166	Amphiprion_percula
ENSSFOG00015002254	LARP6	99	69.498	ENSATEG00000004018	larp6a	68	71.816	Anabas_testudineus
ENSSFOG00015002254	LARP6	80	56.872	ENSAPLG00000009914	LARP6	98	56.161	Anas_platyrhynchos
ENSSFOG00015002254	LARP6	81	59.472	ENSACAG00000008613	LARP6	98	58.894	Anolis_carolinensis
ENSSFOG00015002254	LARP6	91	52.532	ENSANAG00000024860	LARP6	95	51.992	Aotus_nancymaae
ENSSFOG00015002254	LARP6	92	72.765	ENSACLG00000018561	larp6a	67	71.310	Astatotilapia_calliptera
ENSSFOG00015002254	LARP6	79	40.447	ENSAMXG00000036816	-	94	40.695	Astyanax_mexicanus
ENSSFOG00015002254	LARP6	99	69.070	ENSAMXG00000029387	larp6a	74	72.008	Astyanax_mexicanus
ENSSFOG00015002254	LARP6	91	51.992	ENSBTAG00000003915	LARP6	95	52.421	Bos_taurus
ENSSFOG00015002254	LARP6	89	52.929	ENSCJAG00000046236	-	95	51.464	Callithrix_jacchus
ENSSFOG00015002254	LARP6	91	52.211	ENSCJAG00000018642	-	95	51.674	Callithrix_jacchus
ENSSFOG00015002254	LARP6	80	56.028	ENSCAFG00000017616	LARP6	97	54.610	Canis_familiaris
ENSSFOG00015002254	LARP6	89	52.929	ENSCAFG00020007296	LARP6	96	51.681	Canis_lupus_dingo
ENSSFOG00015002254	LARP6	91	52.201	ENSCHIG00000013742	LARP6	95	52.632	Capra_hircus
ENSSFOG00015002254	LARP6	80	54.846	ENSTSYG00000028124	LARP6	85	54.374	Carlito_syrichta
ENSSFOG00015002254	LARP6	79	54.762	ENSCAPG00000015452	LARP6	97	53.081	Cavia_aperea
ENSSFOG00015002254	LARP6	93	49.793	ENSCPOG00000022687	LARP6	87	51.843	Cavia_porcellus
ENSSFOG00015002254	LARP6	91	52.321	ENSCCAG00000036320	LARP6	95	51.992	Cebus_capucinus
ENSSFOG00015002254	LARP6	91	52.321	ENSCATG00000042432	LARP6	95	51.782	Cercocebus_atys
ENSSFOG00015002254	LARP6	83	54.691	ENSCLAG00000007893	LARP6	95	51.464	Chinchilla_lanigera
ENSSFOG00015002254	LARP6	91	52.321	ENSCSAG00000013672	LARP6	95	51.782	Chlorocebus_sabaeus
ENSSFOG00015002254	LARP6	80	55.660	ENSCHOG00000003318	LARP6	98	53.459	Choloepus_hoffmanni
ENSSFOG00015002254	LARP6	83	57.373	ENSCPBG00000010771	LARP6	88	56.803	Chrysemys_picta_bellii
ENSSFOG00015002254	LARP6	80	56.028	ENSCANG00000025833	LARP6	98	54.374	Colobus_angolensis_palliatus
ENSSFOG00015002254	LARP6	83	56.293	ENSCGRG00001024472	Larp6	95	52.490	Cricetulus_griseus_chok1gshd
ENSSFOG00015002254	LARP6	83	56.293	ENSCGRG00000004527	Larp6	95	52.490	Cricetulus_griseus_crigri
ENSSFOG00015002254	LARP6	100	70.291	ENSCSEG00000011196	larp6a	71	73.739	Cynoglossus_semilaevis
ENSSFOG00015002254	LARP6	92	72.746	ENSCVAG00000009605	larp6a	71	72.537	Cyprinodon_variegatus
ENSSFOG00015002254	LARP6	93	71.546	ENSDARG00000005355	larp6a	99	74.083	Danio_rerio
ENSSFOG00015002254	LARP6	83	53.811	ENSDNOG00000042993	LARP6	95	50.740	Dasypus_novemcinctus
ENSSFOG00015002254	LARP6	89	50.422	ENSDORG00000023910	Larp6	95	51.599	Dipodomys_ordii
ENSSFOG00015002254	LARP6	60	62.019	ENSETEG00000020390	LARP6	63	75.000	Echinops_telfairi
ENSSFOG00015002254	LARP6	83	56.064	ENSEASG00005005490	LARP6	69	52.632	Equus_asinus_asinus
ENSSFOG00015002254	LARP6	83	56.064	ENSECAG00000014190	LARP6	95	52.510	Equus_caballus
ENSSFOG00015002254	LARP6	93	73.577	ENSELUG00000007341	larp6a	72	73.374	Esox_lucius
ENSSFOG00015002254	LARP6	91	51.153	ENSFCAG00000001361	LARP6	95	51.363	Felis_catus
ENSSFOG00015002254	LARP6	83	56.849	ENSFALG00000012389	LARP6	98	54.936	Ficedula_albicollis
ENSSFOG00015002254	LARP6	80	55.425	ENSFDAG00000019994	LARP6	82	54.009	Fukomys_damarensis
ENSSFOG00015002254	LARP6	92	72.746	ENSFHEG00000010312	larp6a	69	72.537	Fundulus_heteroclitus
ENSSFOG00015002254	LARP6	83	56.751	ENSGALG00000004046	LARP6	92	54.839	Gallus_gallus
ENSSFOG00015002254	LARP6	98	69.882	ENSGAFG00000009426	larp6a	70	72.128	Gambusia_affinis
ENSSFOG00015002254	LARP6	83	72.414	ENSGACG00000014622	larp6a	99	70.115	Gasterosteus_aculeatus
ENSSFOG00015002254	LARP6	82	54.060	ENSGAGG00000010802	LARP6	63	54.756	Gopherus_agassizii
ENSSFOG00015002254	LARP6	80	56.028	ENSGGOG00000024151	LARP6	98	54.374	Gorilla_gorilla
ENSSFOG00015002254	LARP6	92	72.557	ENSHBUG00000021014	larp6a	67	71.102	Haplochromis_burtoni
ENSSFOG00015002254	LARP6	83	55.835	ENSHGLG00000015112	LARP6	95	52.929	Heterocephalus_glaber_female
ENSSFOG00015002254	LARP6	80	56.501	ENSHGLG00100013159	LARP6	98	55.083	Heterocephalus_glaber_male
ENSSFOG00015002254	LARP6	92	72.537	ENSHCOG00000001241	larp6a	92	71.488	Hippocampus_comes
ENSSFOG00015002254	LARP6	82	39.594	ENSIPUG00000002828	-	97	39.303	Ictalurus_punctatus
ENSSFOG00015002254	LARP6	93	71.690	ENSIPUG00000010187	larp6	73	71.690	Ictalurus_punctatus
ENSSFOG00015002254	LARP6	83	54.691	ENSSTOG00000024279	LARP6	93	53.547	Ictidomys_tridecemlineatus
ENSSFOG00015002254	LARP6	83	54.462	ENSJJAG00000011013	Larp6	96	51.681	Jaculus_jaculus
ENSSFOG00015002254	LARP6	92	72.651	ENSKMAG00000001702	larp6a	66	72.443	Kryptolebias_marmoratus
ENSSFOG00015002254	LARP6	99	66.732	ENSLBEG00000000170	larp6a	92	70.021	Labrus_bergylta
ENSSFOG00015002254	LARP6	78	40.625	ENSLACG00000002786	-	94	41.565	Latimeria_chalumnae
ENSSFOG00015002254	LARP6	92	58.577	ENSLACG00000018706	LARP6	91	57.531	Latimeria_chalumnae
ENSSFOG00015002254	LARP6	79	42.381	ENSLOCG00000008547	-	80	43.062	Lepisosteus_oculatus
ENSSFOG00015002254	LARP6	99	68.836	ENSLOCG00000014592	larp6a	72	71.608	Lepisosteus_oculatus
ENSSFOG00015002254	LARP6	83	55.378	ENSLAFG00000016343	LARP6	96	54.233	Loxodonta_africana
ENSSFOG00015002254	LARP6	80	56.132	ENSMFAG00000035507	LARP6	95	53.776	Macaca_fascicularis
ENSSFOG00015002254	LARP6	94	51.738	ENSMMUG00000004429	LARP6	96	52.248	Macaca_mulatta
ENSSFOG00015002254	LARP6	91	52.321	ENSMNEG00000045335	LARP6	95	51.782	Macaca_nemestrina
ENSSFOG00015002254	LARP6	80	56.028	ENSMLEG00000038587	LARP6	98	54.374	Mandrillus_leucophaeus
ENSSFOG00015002254	LARP6	99	69.767	ENSMAMG00000005261	larp6a	68	72.537	Mastacembelus_armatus
ENSSFOG00015002254	LARP6	92	72.765	ENSMZEG00005005774	larp6a	67	71.310	Maylandia_zebra
ENSSFOG00015002254	LARP6	79	58.095	ENSMGAG00000005077	LARP6	98	57.381	Meleagris_gallopavo
ENSSFOG00015002254	LARP6	80	57.075	ENSMAUG00000018486	Larp6	95	53.040	Mesocricetus_auratus
ENSSFOG00015002254	LARP6	80	54.717	ENSMICG00000011234	LARP6	95	51.261	Microcebus_murinus
ENSSFOG00015002254	LARP6	83	55.835	ENSMOCG00000010492	Larp6	95	52.075	Microtus_ochrogaster
ENSSFOG00015002254	LARP6	92	72.327	ENSMMOG00000016284	larp6a	94	72.117	Mola_mola
ENSSFOG00015002254	LARP6	93	51.190	ENSMODG00000009034	LARP6	91	51.660	Monodelphis_domestica
ENSSFOG00015002254	LARP6	90	72.650	ENSMALG00000014439	larp6a	90	69.231	Monopterus_albus
ENSSFOG00015002254	LARP6	83	56.064	MGP_CAROLIEiJ_G0032314	Larp6	95	52.621	Mus_caroli
ENSSFOG00015002254	LARP6	83	55.835	ENSMUSG00000034839	Larp6	95	52.621	Mus_musculus
ENSSFOG00015002254	LARP6	83	55.835	MGP_PahariEiJ_G0015180	Larp6	95	52.075	Mus_pahari
ENSSFOG00015002254	LARP6	83	56.293	MGP_SPRETEiJ_G0033452	Larp6	95	53.040	Mus_spretus
ENSSFOG00015002254	LARP6	80	56.132	ENSMPUG00000017086	LARP6	97	54.717	Mustela_putorius_furo
ENSSFOG00015002254	LARP6	93	51.546	ENSMLUG00000010319	LARP6	97	51.546	Myotis_lucifugus
ENSSFOG00015002254	LARP6	91	51.363	ENSNGAG00000014238	Larp6	95	51.867	Nannospalax_galili
ENSSFOG00015002254	LARP6	92	72.765	ENSNBRG00000008120	larp6a	92	68.815	Neolamprologus_brichardi
ENSSFOG00015002254	LARP6	80	56.132	ENSNLEG00000013691	LARP6	95	51.891	Nomascus_leucogenys
ENSSFOG00015002254	LARP6	75	66.667	ENSMEUG00000002270	LARP6	83	68.333	Notamacropus_eugenii
ENSSFOG00015002254	LARP6	63	55.627	ENSOPRG00000004868	-	89	54.706	Ochotona_princeps
ENSSFOG00015002254	LARP6	83	54.333	ENSODEG00000015958	LARP6	95	51.820	Octodon_degus
ENSSFOG00015002254	LARP6	92	72.464	ENSONIG00000002901	larp6a	92	71.014	Oreochromis_niloticus
ENSSFOG00015002254	LARP6	80	56.892	ENSOCUG00000009306	LARP6	99	56.010	Oryctolagus_cuniculus
ENSSFOG00015002254	LARP6	89	72.318	ENSORLG00000014256	larp6a	92	72.103	Oryzias_latipes
ENSSFOG00015002254	LARP6	92	72.117	ENSORLG00020019657	larp6a	69	71.908	Oryzias_latipes_hni
ENSSFOG00015002254	LARP6	92	72.537	ENSORLG00015017915	larp6a	69	72.327	Oryzias_latipes_hsok
ENSSFOG00015002254	LARP6	92	72.117	ENSOMEG00000017049	larp6a	70	71.908	Oryzias_melastigma
ENSSFOG00015002254	LARP6	91	49.041	ENSOGAG00000000522	LARP6	95	51.368	Otolemur_garnettii
ENSSFOG00015002254	LARP6	80	55.896	ENSOARG00000018750	LARP6	96	54.953	Ovis_aries
ENSSFOG00015002254	LARP6	80	56.028	ENSPPAG00000031247	LARP6	98	54.374	Pan_paniscus
ENSSFOG00015002254	LARP6	91	50.943	ENSPPRG00000011282	LARP6	95	51.153	Panthera_pardus
ENSSFOG00015002254	LARP6	80	55.083	ENSPTIG00000015318	LARP6	84	53.664	Panthera_tigris_altaica
ENSSFOG00015002254	LARP6	91	52.321	ENSPTRG00000007234	LARP6	95	51.782	Pan_troglodytes
ENSSFOG00015002254	LARP6	91	52.321	ENSPANG00000016362	LARP6	95	51.782	Papio_anubis
ENSSFOG00015002254	LARP6	95	70.968	ENSPKIG00000004511	LARP6	73	70.697	Paramormyrops_kingsleyae
ENSSFOG00015002254	LARP6	91	70.402	ENSPKIG00000020103	larp6a	90	70.190	Paramormyrops_kingsleyae
ENSSFOG00015002254	LARP6	52	71.028	ENSPSIG00000009071	LARP6	86	65.812	Pelodiscus_sinensis
ENSSFOG00015002254	LARP6	92	73.166	ENSPMGG00000006958	larp6a	95	72.956	Periophthalmus_magnuspinnatus
ENSSFOG00015002254	LARP6	92	52.697	ENSPEMG00000012909	Larp6	95	52.201	Peromyscus_maniculatus_bairdii
ENSSFOG00015002254	LARP6	83	54.422	ENSPCIG00000020765	LARP6	91	51.852	Phascolarctos_cinereus
ENSSFOG00015002254	LARP6	98	69.804	ENSPFOG00000014175	larp6a	97	69.608	Poecilia_formosa
ENSSFOG00015002254	LARP6	98	70.079	ENSPLAG00000011105	larp6a	68	72.956	Poecilia_latipinna
ENSSFOG00015002254	LARP6	98	69.882	ENSPMEG00000011085	larp6a	69	72.746	Poecilia_mexicana
ENSSFOG00015002254	LARP6	98	68.297	ENSPREG00000008067	larp6a	69	72.385	Poecilia_reticulata
ENSSFOG00015002254	LARP6	80	56.132	ENSPPYG00000006604	LARP6	95	51.782	Pongo_abelii
ENSSFOG00015002254	LARP6	58	62.651	ENSPCAG00000014197	LARP6	73	62.651	Procavia_capensis
ENSSFOG00015002254	LARP6	91	50.734	ENSPCOG00000022934	LARP6	95	50.524	Propithecus_coquereli
ENSSFOG00015002254	LARP6	91	52.708	ENSPVAG00000005618	LARP6	95	52.708	Pteropus_vampyrus
ENSSFOG00015002254	LARP6	92	72.765	ENSPNYG00000009835	larp6a	92	71.310	Pundamilia_nyererei
ENSSFOG00015002254	LARP6	99	68.330	ENSPNAG00000017966	larp6a	80	71.545	Pygocentrus_nattereri
ENSSFOG00015002254	LARP6	83	56.522	ENSRNOG00000012438	Larp6	95	53.040	Rattus_norvegicus
ENSSFOG00015002254	LARP6	89	53.118	ENSRBIG00000032902	LARP6	94	51.613	Rhinopithecus_bieti
ENSSFOG00015002254	LARP6	91	52.321	ENSRROG00000043074	LARP6	95	51.782	Rhinopithecus_roxellana
ENSSFOG00015002254	LARP6	80	56.028	ENSSBOG00000024190	LARP6	98	54.374	Saimiri_boliviensis_boliviensis
ENSSFOG00015002254	LARP6	80	52.123	ENSSHAG00000018495	LARP6	97	54.009	Sarcophilus_harrisii
ENSSFOG00015002254	LARP6	92	73.319	ENSSMAG00000009953	larp6a	68	73.319	Scophthalmus_maximus
ENSSFOG00015002254	LARP6	100	69.942	ENSSDUG00000007438	larp6a	68	74.004	Seriola_dumerili
ENSSFOG00015002254	LARP6	92	74.214	ENSSLDG00000016647	larp6a	68	74.004	Seriola_lalandi_dorsalis
ENSSFOG00015002254	LARP6	81	56.086	ENSSPUG00000011312	LARP6	98	56.563	Sphenodon_punctatus
ENSSFOG00015002254	LARP6	100	69.961	ENSSPAG00000020502	larp6a	68	73.375	Stegastes_partitus
ENSSFOG00015002254	LARP6	91	52.830	ENSSSCG00000004974	LARP6	95	53.390	Sus_scrofa
ENSSFOG00015002254	LARP6	80	57.143	ENSTGUG00000005808	LARP6	98	56.770	Taeniopygia_guttata
ENSSFOG00015002254	LARP6	99	68.411	ENSTRUG00000003151	larp6a	71	71.339	Takifugu_rubripes
ENSSFOG00015002254	LARP6	92	75.219	ENSTNIG00000011926	larp6a	97	75.219	Tetraodon_nigroviridis
ENSSFOG00015002254	LARP6	80	55.450	ENSTBEG00000015077	LARP6	98	54.028	Tupaia_belangeri
ENSSFOG00015002254	LARP6	80	56.974	ENSUAMG00000010467	LARP6	84	55.556	Ursus_americanus
ENSSFOG00015002254	LARP6	80	55.792	ENSVVUG00000015227	LARP6	92	54.374	Vulpes_vulpes
ENSSFOG00015002254	LARP6	92	57.537	ENSXETG00000020340	larp6	94	57.962	Xenopus_tropicalis
ENSSFOG00015002254	LARP6	92	72.651	ENSXCOG00000012654	larp6a	97	72.537	Xiphophorus_couchianus
ENSSFOG00015002254	LARP6	98	69.412	ENSXMAG00000021015	larp6a	66	72.537	Xiphophorus_maculatus