EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015002293 (Gene tree)
Gene ID: 108925707
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5255 bases
Position: chrKV410846.1:3364765-3370019
Accession: 108925707
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015003491	RNA_pol_I_A49	PF06870.12	1.3e-105	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015003548	-	2045	XM_018737869	ENSSFOP00015003491	416 (aa)	XP_018593385	A0A1W4YYA7

Gene Model

Click here to download ENSSFOG00015002293's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015002293's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015002293	polr1e	99	45.985	ENSG00000137054	POLR1E	97	45.366	Homo_sapiens
ENSSFOG00015002293	polr1e	99	53.477	ENSAPOG00000012452	polr1e	99	53.477	Acanthochromis_polyacanthus
ENSSFOG00015002293	polr1e	99	43.764	ENSAMEG00000010193	POLR1E	94	43.764	Ailuropoda_melanoleuca
ENSSFOG00015002293	polr1e	94	58.629	ENSACIG00000009884	polr1e	99	58.629	Amphilophus_citrinellus
ENSSFOG00015002293	polr1e	99	58.753	ENSAOCG00000005665	polr1e	99	58.753	Amphiprion_ocellaris
ENSSFOG00015002293	polr1e	99	58.993	ENSAPEG00000020581	polr1e	99	58.993	Amphiprion_percula
ENSSFOG00015002293	polr1e	99	60.382	ENSATEG00000020609	polr1e	99	60.382	Anabas_testudineus
ENSSFOG00015002293	polr1e	81	40.052	ENSAPLG00000010340	POLR1E	99	40.052	Anas_platyrhynchos
ENSSFOG00015002293	polr1e	98	46.098	ENSANAG00000038046	POLR1E	97	46.098	Aotus_nancymaae
ENSSFOG00015002293	polr1e	99	60.671	ENSACLG00000013685	polr1e	99	60.671	Astatotilapia_calliptera
ENSSFOG00015002293	polr1e	100	53.349	ENSAMXG00000018181	polr1e	100	53.349	Astyanax_mexicanus
ENSSFOG00015002293	polr1e	98	48.049	ENSBTAG00000012243	POLR1E	97	48.049	Bos_taurus
ENSSFOG00015002293	polr1e	95	43.577	ENSCJAG00000010512	POLR1E	91	46.721	Callithrix_jacchus
ENSSFOG00015002293	polr1e	98	47.561	ENSCAFG00000002377	POLR1E	97	47.561	Canis_familiaris
ENSSFOG00015002293	polr1e	98	47.561	ENSCAFG00020017851	POLR1E	97	47.561	Canis_lupus_dingo
ENSSFOG00015002293	polr1e	98	47.805	ENSCHIG00000019479	POLR1E	97	47.805	Capra_hircus
ENSSFOG00015002293	polr1e	98	45.610	ENSTSYG00000002075	POLR1E	97	45.610	Carlito_syrichta
ENSSFOG00015002293	polr1e	69	43.945	ENSCAPG00000015653	POLR1E	99	43.945	Cavia_aperea
ENSSFOG00015002293	polr1e	98	46.585	ENSCPOG00000009965	POLR1E	98	46.585	Cavia_porcellus
ENSSFOG00015002293	polr1e	98	41.463	ENSCCAG00000029460	POLR1E	97	41.463	Cebus_capucinus
ENSSFOG00015002293	polr1e	98	45.366	ENSCATG00000031732	POLR1E	97	54.206	Cercocebus_atys
ENSSFOG00015002293	polr1e	86	49.020	ENSCLAG00000012701	POLR1E	93	49.020	Chinchilla_lanigera
ENSSFOG00015002293	polr1e	98	45.854	ENSCSAG00000010782	POLR1E	97	45.854	Chlorocebus_sabaeus
ENSSFOG00015002293	polr1e	95	40.050	ENSCHOG00000013024	POLR1E	83	40.399	Choloepus_hoffmanni
ENSSFOG00015002293	polr1e	100	48.201	ENSCPBG00000006923	POLR1E	100	48.441	Chrysemys_picta_bellii
ENSSFOG00015002293	polr1e	99	45.255	ENSCANG00000036112	POLR1E	97	54.206	Colobus_angolensis_palliatus
ENSSFOG00015002293	polr1e	98	45.122	ENSCGRG00001006197	Polr1e	94	45.122	Cricetulus_griseus_chok1gshd
ENSSFOG00015002293	polr1e	98	44.878	ENSCGRG00000006430	Polr1e	94	44.878	Cricetulus_griseus_crigri
ENSSFOG00015002293	polr1e	100	55.263	ENSCSEG00000005121	polr1e	100	55.263	Cynoglossus_semilaevis
ENSSFOG00015002293	polr1e	99	58.513	ENSCVAG00000019759	polr1e	99	58.513	Cyprinodon_variegatus
ENSSFOG00015002293	polr1e	97	53.695	ENSDARG00000006434	polr1e	99	53.477	Danio_rerio
ENSSFOG00015002293	polr1e	95	42.793	ENSDNOG00000010257	POLR1E	94	42.793	Dasypus_novemcinctus
ENSSFOG00015002293	polr1e	82	44.767	ENSETEG00000018204	POLR1E	96	45.349	Echinops_telfairi
ENSSFOG00015002293	polr1e	61	45.736	ENSEBUG00000010635	-	96	32.647	Eptatretus_burgeri
ENSSFOG00015002293	polr1e	95	47.848	ENSEASG00005000675	POLR1E	94	47.848	Equus_asinus_asinus
ENSSFOG00015002293	polr1e	95	48.101	ENSECAG00000014669	POLR1E	94	48.101	Equus_caballus
ENSSFOG00015002293	polr1e	92	42.670	ENSEEUG00000011928	POLR1E	81	42.670	Erinaceus_europaeus
ENSSFOG00015002293	polr1e	99	58.513	ENSELUG00000008150	polr1e	99	58.513	Esox_lucius
ENSSFOG00015002293	polr1e	98	47.073	ENSFCAG00000013081	POLR1E	94	48.354	Felis_catus
ENSSFOG00015002293	polr1e	95	45.614	ENSFALG00000012950	POLR1E	99	45.614	Ficedula_albicollis
ENSSFOG00015002293	polr1e	98	48.049	ENSFDAG00000016917	POLR1E	98	48.049	Fukomys_damarensis
ENSSFOG00015002293	polr1e	99	58.993	ENSFHEG00000009801	polr1e	99	58.993	Fundulus_heteroclitus
ENSSFOG00015002293	polr1e	100	45.412	ENSGMOG00000003336	POLR1E	100	46.118	Gadus_morhua
ENSSFOG00015002293	polr1e	99	45.985	ENSGALG00000005395	POLR1E	99	45.985	Gallus_gallus
ENSSFOG00015002293	polr1e	99	59.233	ENSGAFG00000004850	polr1e	99	59.233	Gambusia_affinis
ENSSFOG00015002293	polr1e	99	53.461	ENSGACG00000016087	polr1e	99	53.461	Gasterosteus_aculeatus
ENSSFOG00015002293	polr1e	98	42.476	ENSGAGG00000001659	POLR1E	98	43.467	Gopherus_agassizii
ENSSFOG00015002293	polr1e	99	45.985	ENSGGOG00000001882	POLR1E	97	54.206	Gorilla_gorilla
ENSSFOG00015002293	polr1e	99	60.432	ENSHBUG00000002559	polr1e	99	60.432	Haplochromis_burtoni
ENSSFOG00015002293	polr1e	98	47.482	ENSHGLG00000002036	POLR1E	98	47.482	Heterocephalus_glaber_female
ENSSFOG00015002293	polr1e	98	47.722	ENSHGLG00100012784	POLR1E	98	47.722	Heterocephalus_glaber_male
ENSSFOG00015002293	polr1e	99	56.563	ENSHCOG00000002774	polr1e	99	56.802	Hippocampus_comes
ENSSFOG00015002293	polr1e	100	53.444	ENSIPUG00000003019	polr1e	100	53.444	Ictalurus_punctatus
ENSSFOG00015002293	polr1e	95	47.089	ENSSTOG00000009810	POLR1E	94	47.089	Ictidomys_tridecemlineatus
ENSSFOG00015002293	polr1e	98	47.073	ENSJJAG00000020731	Polr1e	94	47.073	Jaculus_jaculus
ENSSFOG00015002293	polr1e	99	58.753	ENSKMAG00000000046	polr1e	99	58.753	Kryptolebias_marmoratus
ENSSFOG00015002293	polr1e	100	59.375	ENSLBEG00000003104	polr1e	99	59.375	Labrus_bergylta
ENSSFOG00015002293	polr1e	86	55.096	ENSLACG00000003416	POLR1E	99	55.096	Latimeria_chalumnae
ENSSFOG00015002293	polr1e	99	58.413	ENSLOCG00000012859	polr1e	99	58.413	Lepisosteus_oculatus
ENSSFOG00015002293	polr1e	95	48.354	ENSLAFG00000012831	POLR1E	93	48.354	Loxodonta_africana
ENSSFOG00015002293	polr1e	98	45.366	ENSMFAG00000045465	POLR1E	97	54.206	Macaca_fascicularis
ENSSFOG00015002293	polr1e	98	45.366	ENSMMUG00000017892	POLR1E	97	54.206	Macaca_mulatta
ENSSFOG00015002293	polr1e	98	41.905	ENSMNEG00000040283	POLR1E	91	53.165	Macaca_nemestrina
ENSSFOG00015002293	polr1e	98	45.366	ENSMLEG00000031135	POLR1E	97	54.206	Mandrillus_leucophaeus
ENSSFOG00015002293	polr1e	100	59.330	ENSMAMG00000001260	polr1e	99	59.330	Mastacembelus_armatus
ENSSFOG00015002293	polr1e	99	60.192	ENSMZEG00005021536	polr1e	99	60.192	Maylandia_zebra
ENSSFOG00015002293	polr1e	98	44.878	ENSMAUG00000021044	Polr1e	94	44.878	Mesocricetus_auratus
ENSSFOG00015002293	polr1e	95	48.111	ENSMICG00000003673	POLR1E	94	48.111	Microcebus_murinus
ENSSFOG00015002293	polr1e	98	44.878	ENSMOCG00000012920	Polr1e	94	44.878	Microtus_ochrogaster
ENSSFOG00015002293	polr1e	99	58.373	ENSMMOG00000007391	polr1e	99	58.373	Mola_mola
ENSSFOG00015002293	polr1e	99	48.193	ENSMODG00000002884	POLR1E	100	48.193	Monodelphis_domestica
ENSSFOG00015002293	polr1e	99	59.233	ENSMALG00000002665	polr1e	99	59.286	Monopterus_albus
ENSSFOG00015002293	polr1e	98	45.610	MGP_CAROLIEiJ_G0025967	Polr1e	97	46.348	Mus_caroli
ENSSFOG00015002293	polr1e	98	45.610	ENSMUSG00000028318	Polr1e	97	46.348	Mus_musculus
ENSSFOG00015002293	polr1e	98	46.585	MGP_PahariEiJ_G0024114	Polr1e	97	47.355	Mus_pahari
ENSSFOG00015002293	polr1e	98	45.854	MGP_SPRETEiJ_G0026930	Polr1e	97	46.599	Mus_spretus
ENSSFOG00015002293	polr1e	95	43.596	ENSMPUG00000006040	POLR1E	94	42.697	Mustela_putorius_furo
ENSSFOG00015002293	polr1e	95	49.620	ENSMLUG00000012688	POLR1E	91	49.620	Myotis_lucifugus
ENSSFOG00015002293	polr1e	99	48.309	ENSNGAG00000002520	Polr1e	95	48.309	Nannospalax_galili
ENSSFOG00015002293	polr1e	99	60.432	ENSNBRG00000016822	polr1e	99	60.432	Neolamprologus_brichardi
ENSSFOG00015002293	polr1e	99	46.472	ENSNLEG00000003616	POLR1E	97	54.206	Nomascus_leucogenys
ENSSFOG00015002293	polr1e	73	53.778	ENSMEUG00000015372	-	80	53.778	Notamacropus_eugenii
ENSSFOG00015002293	polr1e	86	43.611	ENSOPRG00000014206	POLR1E	99	43.611	Ochotona_princeps
ENSSFOG00015002293	polr1e	98	47.805	ENSODEG00000014565	POLR1E	95	47.805	Octodon_degus
ENSSFOG00015002293	polr1e	99	60.192	ENSONIG00000008921	polr1e	99	60.192	Oreochromis_niloticus
ENSSFOG00015002293	polr1e	99	46.715	ENSOCUG00000024773	POLR1E	98	47.202	Oryctolagus_cuniculus
ENSSFOG00015002293	polr1e	99	57.074	ENSORLG00000005143	polr1e	99	57.074	Oryzias_latipes
ENSSFOG00015002293	polr1e	93	55.155	ENSORLG00020007271	polr1e	99	55.155	Oryzias_latipes_hni
ENSSFOG00015002293	polr1e	99	56.595	ENSORLG00015000137	polr1e	99	56.595	Oryzias_latipes_hsok
ENSSFOG00015002293	polr1e	99	56.595	ENSOMEG00000013264	polr1e	98	56.595	Oryzias_melastigma
ENSSFOG00015002293	polr1e	98	46.341	ENSOGAG00000012981	POLR1E	92	47.595	Otolemur_garnettii
ENSSFOG00015002293	polr1e	98	48.049	ENSOARG00000011465	POLR1E	94	48.049	Ovis_aries
ENSSFOG00015002293	polr1e	99	45.985	ENSPPAG00000034566	POLR1E	97	54.206	Pan_paniscus
ENSSFOG00015002293	polr1e	98	47.073	ENSPPRG00000005649	POLR1E	97	47.073	Panthera_pardus
ENSSFOG00015002293	polr1e	98	47.317	ENSPTIG00000009774	POLR1E	97	47.317	Panthera_tigris_altaica
ENSSFOG00015002293	polr1e	99	45.985	ENSPTRG00000020944	POLR1E	97	54.206	Pan_troglodytes
ENSSFOG00015002293	polr1e	98	45.366	ENSPANG00000025563	POLR1E	97	54.206	Papio_anubis
ENSSFOG00015002293	polr1e	99	66.667	ENSPKIG00000003562	polr1e	99	66.667	Paramormyrops_kingsleyae
ENSSFOG00015002293	polr1e	95	48.995	ENSPSIG00000003274	POLR1E	92	49.749	Pelodiscus_sinensis
ENSSFOG00015002293	polr1e	95	57.286	ENSPMGG00000024169	polr1e	96	57.286	Periophthalmus_magnuspinnatus
ENSSFOG00015002293	polr1e	95	45.823	ENSPEMG00000019151	-	91	45.823	Peromyscus_maniculatus_bairdii
ENSSFOG00015002293	polr1e	98	37.897	ENSPEMG00000022300	-	93	37.897	Peromyscus_maniculatus_bairdii
ENSSFOG00015002293	polr1e	99	47.585	ENSPCIG00000014798	POLR1E	99	47.585	Phascolarctos_cinereus
ENSSFOG00015002293	polr1e	99	57.014	ENSPFOG00000019627	polr1e	99	57.014	Poecilia_formosa
ENSSFOG00015002293	polr1e	99	60.432	ENSPLAG00000022679	polr1e	99	60.432	Poecilia_latipinna
ENSSFOG00015002293	polr1e	86	63.056	ENSPMEG00000022123	polr1e	93	63.056	Poecilia_mexicana
ENSSFOG00015002293	polr1e	99	59.233	ENSPREG00000009470	polr1e	99	59.233	Poecilia_reticulata
ENSSFOG00015002293	polr1e	98	46.229	ENSPPYG00000019061	POLR1E	97	46.229	Pongo_abelii
ENSSFOG00015002293	polr1e	52	43.056	ENSPCAG00000004891	POLR1E	71	43.056	Procavia_capensis
ENSSFOG00015002293	polr1e	98	46.098	ENSPCOG00000027448	POLR1E	97	46.098	Propithecus_coquereli
ENSSFOG00015002293	polr1e	95	47.487	ENSPVAG00000007940	POLR1E	83	47.487	Pteropus_vampyrus
ENSSFOG00015002293	polr1e	99	60.432	ENSPNYG00000001032	polr1e	99	60.432	Pundamilia_nyererei
ENSSFOG00015002293	polr1e	99	55.422	ENSPNAG00000006987	polr1e	99	55.422	Pygocentrus_nattereri
ENSSFOG00015002293	polr1e	98	45.366	ENSRNOG00000012664	Polr1e	94	45.366	Rattus_norvegicus
ENSSFOG00015002293	polr1e	99	45.985	ENSRBIG00000034214	POLR1E	99	46.579	Rhinopithecus_bieti
ENSSFOG00015002293	polr1e	98	45.366	ENSRROG00000031986	POLR1E	97	54.206	Rhinopithecus_roxellana
ENSSFOG00015002293	polr1e	98	45.366	ENSSBOG00000021415	POLR1E	97	45.366	Saimiri_boliviensis_boliviensis
ENSSFOG00015002293	polr1e	86	46.797	ENSSHAG00000016084	POLR1E	98	46.797	Sarcophilus_harrisii
ENSSFOG00015002293	polr1e	99	60.432	ENSSMAG00000011672	polr1e	93	60.432	Scophthalmus_maximus
ENSSFOG00015002293	polr1e	99	60.192	ENSSDUG00000022279	polr1e	99	60.192	Seriola_dumerili
ENSSFOG00015002293	polr1e	99	59.952	ENSSLDG00000024918	polr1e	99	59.952	Seriola_lalandi_dorsalis
ENSSFOG00015002293	polr1e	56	41.631	ENSSARG00000009810	-	58	42.489	Sorex_araneus
ENSSFOG00015002293	polr1e	99	48.565	ENSSPUG00000009499	POLR1E	99	48.565	Sphenodon_punctatus
ENSSFOG00015002293	polr1e	99	59.233	ENSSPAG00000021240	polr1e	99	59.233	Stegastes_partitus
ENSSFOG00015002293	polr1e	98	47.317	ENSSSCG00000005347	POLR1E	97	47.317	Sus_scrofa
ENSSFOG00015002293	polr1e	95	40.541	ENSTGUG00000007169	POLR1E	99	40.541	Taeniopygia_guttata
ENSSFOG00015002293	polr1e	100	55.582	ENSTRUG00000020779	polr1e	100	57.180	Takifugu_rubripes
ENSSFOG00015002293	polr1e	100	56.563	ENSTNIG00000017812	polr1e	100	56.563	Tetraodon_nigroviridis
ENSSFOG00015002293	polr1e	95	46.851	ENSTBEG00000013786	POLR1E	84	46.851	Tupaia_belangeri
ENSSFOG00015002293	polr1e	95	47.000	ENSTTRG00000008294	POLR1E	85	47.277	Tursiops_truncatus
ENSSFOG00015002293	polr1e	99	48.418	ENSUAMG00000012474	POLR1E	97	50.140	Ursus_americanus
ENSSFOG00015002293	polr1e	99	48.418	ENSUMAG00000011496	POLR1E	97	48.418	Ursus_maritimus
ENSSFOG00015002293	polr1e	82	43.895	ENSVPAG00000009048	POLR1E	81	43.895	Vicugna_pacos
ENSSFOG00015002293	polr1e	98	47.561	ENSVVUG00000019954	POLR1E	97	47.561	Vulpes_vulpes
ENSSFOG00015002293	polr1e	99	46.009	ENSXETG00000006533	polr1e	99	46.009	Xenopus_tropicalis
ENSSFOG00015002293	polr1e	99	56.115	ENSXCOG00000013706	polr1e	99	56.115	Xiphophorus_couchianus
ENSSFOG00015002293	polr1e	99	59.712	ENSXMAG00000012484	polr1e	99	59.712	Xiphophorus_maculatus