EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015002390 (Gene tree)
Gene ID: 108920267
Gene Symbol: nup35
Alias: fj68d11|wu:fj68d11|zgc:65979
Full Name: nucleoporin 35
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 44894 bases
Position: chrKV411287.1:3127795-3172688
Accession: 108920267
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015003665	Nup35_RRM	PF05172.13	1.5e-26	1	1
ENSSFOP00015003642	Nup35_RRM	PF05172.13	1.5e-26	1	1
ENSSFOP00015003677	Nup35_RRM	PF05172.13	1.6e-26	1	1
ENSSFOP00015003665	Nup35_RRM_2	PF14605.6	1.1e-10	1	1
ENSSFOP00015003642	Nup35_RRM_2	PF14605.6	1.2e-10	1	1
ENSSFOP00015003677	Nup35_RRM_2	PF14605.6	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015003727	-	2994	XM_018728888	ENSSFOP00015003665	314 (aa)	XP_018584404	A0A1W4XXX9
ENSSFOT00015003704	-	1687	-	ENSSFOP00015003642	331 (aa)	-	-
ENSSFOT00015003739	-	3054	-	ENSSFOP00015003677	334 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015002390's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015002390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015002390	nup35	99	75.159	ENSG00000163002	NUP35	100	80.263	Homo_sapiens
ENSSFOG00015002390	nup35	100	63.889	ENSAPOG00000003630	nup35	100	63.889	Acanthochromis_polyacanthus
ENSSFOG00015002390	nup35	99	73.502	ENSAMEG00000001191	NUP35	96	73.502	Ailuropoda_melanoleuca
ENSSFOG00015002390	nup35	82	63.462	ENSACIG00000023984	nup35	98	64.062	Amphilophus_citrinellus
ENSSFOG00015002390	nup35	100	65.300	ENSAOCG00000007484	nup35	100	65.300	Amphiprion_ocellaris
ENSSFOG00015002390	nup35	100	65.300	ENSAPEG00000020027	nup35	100	65.615	Amphiprion_percula
ENSSFOG00015002390	nup35	100	67.722	ENSATEG00000019305	nup35	100	67.284	Anabas_testudineus
ENSSFOG00015002390	nup35	99	76.415	ENSAPLG00000009161	NUP35	97	76.415	Anas_platyrhynchos
ENSSFOG00015002390	nup35	99	74.522	ENSACAG00000008692	NUP35	96	74.522	Anolis_carolinensis
ENSSFOG00015002390	nup35	99	74.841	ENSANAG00000021090	NUP35	96	74.841	Aotus_nancymaae
ENSSFOG00015002390	nup35	100	66.250	ENSACLG00000013918	nup35	100	66.250	Astatotilapia_calliptera
ENSSFOG00015002390	nup35	99	81.290	ENSAMXG00000003371	nup35	100	81.639	Astyanax_mexicanus
ENSSFOG00015002390	nup35	99	74.286	ENSBTAG00000009777	NUP35	96	74.286	Bos_taurus
ENSSFOG00015002390	nup35	99	75.159	ENSCJAG00000011104	NUP35	96	75.159	Callithrix_jacchus
ENSSFOG00015002390	nup35	97	74.038	ENSCAFG00000031849	NUP35	100	74.038	Canis_familiaris
ENSSFOG00015002390	nup35	98	74.367	ENSCAFG00020008408	NUP35	96	74.367	Canis_lupus_dingo
ENSSFOG00015002390	nup35	97	74.194	ENSCHIG00000023148	NUP35	100	74.194	Capra_hircus
ENSSFOG00015002390	nup35	99	75.478	ENSTSYG00000002117	NUP35	96	75.478	Carlito_syrichta
ENSSFOG00015002390	nup35	98	60.317	ENSCAPG00000005703	NUP35	97	61.270	Cavia_aperea
ENSSFOG00015002390	nup35	99	73.968	ENSCPOG00000011906	NUP35	97	75.080	Cavia_porcellus
ENSSFOG00015002390	nup35	99	75.159	ENSCCAG00000025009	NUP35	96	78.125	Cebus_capucinus
ENSSFOG00015002390	nup35	99	63.694	ENSCATG00000033109	NUP35	96	63.694	Cercocebus_atys
ENSSFOG00015002390	nup35	99	74.921	ENSCLAG00000012559	NUP35	96	74.921	Chinchilla_lanigera
ENSSFOG00015002390	nup35	99	74.841	ENSCSAG00000012620	NUP35	96	74.841	Chlorocebus_sabaeus
ENSSFOG00015002390	nup35	98	76.752	ENSCPBG00000001303	NUP35	97	77.389	Chrysemys_picta_bellii
ENSSFOG00015002390	nup35	97	42.727	ENSCING00000009659	-	97	42.727	Ciona_intestinalis
ENSSFOG00015002390	nup35	98	43.023	ENSCSAVG00000007467	-	99	43.023	Ciona_savignyi
ENSSFOG00015002390	nup35	99	74.841	ENSCANG00000030785	NUP35	98	76.923	Colobus_angolensis_palliatus
ENSSFOG00015002390	nup35	99	72.843	ENSCGRG00001018638	-	96	73.077	Cricetulus_griseus_chok1gshd
ENSSFOG00015002390	nup35	99	72.843	ENSCGRG00000011313	-	96	73.077	Cricetulus_griseus_crigri
ENSSFOG00015002390	nup35	100	64.151	ENSCSEG00000000938	nup35	100	64.151	Cynoglossus_semilaevis
ENSSFOG00015002390	nup35	100	67.188	ENSCVAG00000001792	nup35	100	66.768	Cyprinodon_variegatus
ENSSFOG00015002390	nup35	100	83.439	ENSDARG00000012222	nup35	100	84.262	Danio_rerio
ENSSFOG00015002390	nup35	99	73.016	ENSDNOG00000038754	-	96	73.016	Dasypus_novemcinctus
ENSSFOG00015002390	nup35	99	73.651	ENSDNOG00000009513	-	85	73.651	Dasypus_novemcinctus
ENSSFOG00015002390	nup35	99	75.478	ENSDORG00000010458	-	97	75.719	Dipodomys_ordii
ENSSFOG00015002390	nup35	98	73.802	ENSETEG00000005896	NUP35	100	73.802	Echinops_telfairi
ENSSFOG00015002390	nup35	98	56.481	ENSEBUG00000013034	nup35	99	57.099	Eptatretus_burgeri
ENSSFOG00015002390	nup35	99	74.286	ENSEASG00005022100	NUP35	96	74.286	Equus_asinus_asinus
ENSSFOG00015002390	nup35	99	74.132	ENSECAG00000003968	NUP35	100	74.516	Equus_caballus
ENSSFOG00015002390	nup35	99	66.667	ENSEEUG00000008469	NUP35	96	66.667	Erinaceus_europaeus
ENSSFOG00015002390	nup35	100	79.683	ENSELUG00000013693	nup35	100	80.065	Esox_lucius
ENSSFOG00015002390	nup35	99	73.502	ENSFCAG00000025636	NUP35	100	73.397	Felis_catus
ENSSFOG00015002390	nup35	98	75.478	ENSFALG00000013175	NUP35	97	76.433	Ficedula_albicollis
ENSSFOG00015002390	nup35	99	74.522	ENSFDAG00000017998	NUP35	96	74.522	Fukomys_damarensis
ENSSFOG00015002390	nup35	100	67.192	ENSFHEG00000010229	nup35	100	65.951	Fundulus_heteroclitus
ENSSFOG00015002390	nup35	80	59.091	ENSGMOG00000003337	nup35	100	59.091	Gadus_morhua
ENSSFOG00015002390	nup35	98	77.070	ENSGALG00000002689	NUP35	97	77.070	Gallus_gallus
ENSSFOG00015002390	nup35	100	66.250	ENSGAFG00000022048	nup35	100	65.443	Gambusia_affinis
ENSSFOG00015002390	nup35	100	65.714	ENSGACG00000008203	nup35	100	65.714	Gasterosteus_aculeatus
ENSSFOG00015002390	nup35	97	77.814	ENSGAGG00000001967	NUP35	100	77.814	Gopherus_agassizii
ENSSFOG00015002390	nup35	99	75.159	ENSGGOG00000009919	NUP35	98	75.000	Gorilla_gorilla
ENSSFOG00015002390	nup35	98	58.280	ENSHGLG00000000414	-	97	58.280	Heterocephalus_glaber_female
ENSSFOG00015002390	nup35	92	65.646	ENSHGLG00000008616	-	90	65.646	Heterocephalus_glaber_female
ENSSFOG00015002390	nup35	99	73.651	ENSHGLG00000013230	NUP35	96	73.651	Heterocephalus_glaber_female
ENSSFOG00015002390	nup35	92	65.646	ENSHGLG00100000091	-	91	65.646	Heterocephalus_glaber_male
ENSSFOG00015002390	nup35	98	58.280	ENSHGLG00100010869	-	97	58.280	Heterocephalus_glaber_male
ENSSFOG00015002390	nup35	99	73.651	ENSHGLG00100012840	NUP35	96	73.651	Heterocephalus_glaber_male
ENSSFOG00015002390	nup35	100	63.376	ENSHCOG00000003882	nup35	100	63.376	Hippocampus_comes
ENSSFOG00015002390	nup35	98	74.839	ENSIPUG00000002798	nup35	98	75.490	Ictalurus_punctatus
ENSSFOG00015002390	nup35	99	73.333	ENSSTOG00000000711	NUP35	96	73.333	Ictidomys_tridecemlineatus
ENSSFOG00015002390	nup35	87	68.231	ENSJJAG00000006387	-	93	68.231	Jaculus_jaculus
ENSSFOG00015002390	nup35	98	66.773	ENSJJAG00000017434	-	96	66.773	Jaculus_jaculus
ENSSFOG00015002390	nup35	100	62.187	ENSJJAG00000007003	-	97	62.187	Jaculus_jaculus
ENSSFOG00015002390	nup35	99	73.567	ENSJJAG00000016432	-	97	73.802	Jaculus_jaculus
ENSSFOG00015002390	nup35	100	62.305	ENSKMAG00000011162	nup35	100	63.222	Kryptolebias_marmoratus
ENSSFOG00015002390	nup35	99	53.774	ENSLBEG00000012416	nup35	99	53.774	Labrus_bergylta
ENSSFOG00015002390	nup35	97	76.849	ENSLACG00000008247	NUP35	100	76.849	Latimeria_chalumnae
ENSSFOG00015002390	nup35	100	79.560	ENSLOCG00000006726	nup35	100	79.560	Lepisosteus_oculatus
ENSSFOG00015002390	nup35	99	73.125	ENSLAFG00000008155	NUP35	96	73.125	Loxodonta_africana
ENSSFOG00015002390	nup35	99	74.522	ENSMFAG00000000834	NUP35	100	74.434	Macaca_fascicularis
ENSSFOG00015002390	nup35	99	74.921	ENSMMUG00000004140	NUP35	99	75.000	Macaca_mulatta
ENSSFOG00015002390	nup35	99	74.841	ENSMNEG00000029014	NUP35	96	74.841	Macaca_nemestrina
ENSSFOG00015002390	nup35	99	74.841	ENSMLEG00000035422	NUP35	98	76.923	Mandrillus_leucophaeus
ENSSFOG00015002390	nup35	100	66.667	ENSMAMG00000013232	nup35	100	66.149	Mastacembelus_armatus
ENSSFOG00015002390	nup35	99	66.038	ENSMZEG00005020619	nup35	98	65.203	Maylandia_zebra
ENSSFOG00015002390	nup35	97	76.129	ENSMGAG00000004412	NUP35	95	76.774	Meleagris_gallopavo
ENSSFOG00015002390	nup35	99	73.885	ENSMAUG00000013776	-	96	73.885	Mesocricetus_auratus
ENSSFOG00015002390	nup35	99	74.286	ENSMICG00000006790	NUP35	100	74.516	Microcebus_murinus
ENSSFOG00015002390	nup35	99	74.204	ENSMOCG00000014754	-	96	74.204	Microtus_ochrogaster
ENSSFOG00015002390	nup35	100	64.444	ENSMMOG00000005026	nup35	100	64.444	Mola_mola
ENSSFOG00015002390	nup35	98	74.522	ENSMODG00000010578	NUP35	96	74.522	Monodelphis_domestica
ENSSFOG00015002390	nup35	100	66.149	ENSMALG00000020187	nup35	100	66.149	Monopterus_albus
ENSSFOG00015002390	nup35	99	73.248	MGP_CAROLIEiJ_G0023709	-	96	73.248	Mus_caroli
ENSSFOG00015002390	nup35	99	72.930	ENSMUSG00000026999	Nup35	96	72.930	Mus_musculus
ENSSFOG00015002390	nup35	99	73.885	MGP_PahariEiJ_G0025160	-	96	73.885	Mus_pahari
ENSSFOG00015002390	nup35	83	63.333	MGP_SPRETEiJ_G0033063	-	100	63.333	Mus_spretus
ENSSFOG00015002390	nup35	99	74.763	ENSMPUG00000002063	NUP35	96	74.763	Mustela_putorius_furo
ENSSFOG00015002390	nup35	99	75.238	ENSMLUG00000013154	NUP35	96	75.238	Myotis_lucifugus
ENSSFOG00015002390	nup35	99	73.248	ENSNGAG00000012107	-	96	73.248	Nannospalax_galili
ENSSFOG00015002390	nup35	100	64.444	ENSNBRG00000020466	nup35	98	65.732	Neolamprologus_brichardi
ENSSFOG00015002390	nup35	99	75.159	ENSNLEG00000035026	NUP35	100	75.081	Nomascus_leucogenys
ENSSFOG00015002390	nup35	67	55.189	ENSMEUG00000003001	-	65	55.189	Notamacropus_eugenii
ENSSFOG00015002390	nup35	80	72.656	ENSOPRG00000016609	NUP35	78	72.656	Ochotona_princeps
ENSSFOG00015002390	nup35	99	74.286	ENSODEG00000011202	-	96	74.286	Octodon_degus
ENSSFOG00015002390	nup35	98	51.768	ENSODEG00000000280	-	95	51.768	Octodon_degus
ENSSFOG00015002390	nup35	100	64.798	ENSONIG00000016251	nup35	100	64.438	Oreochromis_niloticus
ENSSFOG00015002390	nup35	74	77.119	ENSOANG00000006793	-	97	77.119	Ornithorhynchus_anatinus
ENSSFOG00015002390	nup35	99	74.522	ENSOCUG00000014407	NUP35	96	74.522	Oryctolagus_cuniculus
ENSSFOG00015002390	nup35	100	64.577	ENSORLG00000013588	nup35	100	64.577	Oryzias_latipes
ENSSFOG00015002390	nup35	100	64.577	ENSORLG00020008201	nup35	100	64.577	Oryzias_latipes_hni
ENSSFOG00015002390	nup35	100	64.577	ENSORLG00015011096	nup35	100	64.577	Oryzias_latipes_hsok
ENSSFOG00015002390	nup35	100	63.950	ENSOMEG00000007628	nup35	100	63.950	Oryzias_melastigma
ENSSFOG00015002390	nup35	99	73.016	ENSOGAG00000011920	NUP35	96	73.333	Otolemur_garnettii
ENSSFOG00015002390	nup35	99	74.286	ENSOARG00000016728	NUP35	96	74.286	Ovis_aries
ENSSFOG00015002390	nup35	99	75.159	ENSPPAG00000036316	NUP35	100	75.081	Pan_paniscus
ENSSFOG00015002390	nup35	99	73.817	ENSPPRG00000024726	NUP35	100	73.718	Panthera_pardus
ENSSFOG00015002390	nup35	99	73.817	ENSPTIG00000017299	NUP35	96	73.817	Panthera_tigris_altaica
ENSSFOG00015002390	nup35	99	75.159	ENSPTRG00000012711	NUP35	100	75.081	Pan_troglodytes
ENSSFOG00015002390	nup35	99	74.841	ENSPANG00000013686	NUP35	96	74.841	Papio_anubis
ENSSFOG00015002390	nup35	100	88.571	ENSPKIG00000022051	nup35	100	88.571	Paramormyrops_kingsleyae
ENSSFOG00015002390	nup35	97	77.419	ENSPSIG00000002146	NUP35	100	77.419	Pelodiscus_sinensis
ENSSFOG00015002390	nup35	97	63.226	ENSPMGG00000022915	nup35	97	63.722	Periophthalmus_magnuspinnatus
ENSSFOG00015002390	nup35	99	73.885	ENSPEMG00000014718	-	96	73.885	Peromyscus_maniculatus_bairdii
ENSSFOG00015002390	nup35	99	58.154	ENSPMAG00000006604	nup35	98	58.154	Petromyzon_marinus
ENSSFOG00015002390	nup35	98	76.433	ENSPCIG00000015482	NUP35	96	76.433	Phascolarctos_cinereus
ENSSFOG00015002390	nup35	100	65.938	ENSPFOG00000010020	nup35	100	65.138	Poecilia_formosa
ENSSFOG00015002390	nup35	100	65.625	ENSPLAG00000005867	nup35	100	64.832	Poecilia_latipinna
ENSSFOG00015002390	nup35	100	66.349	ENSPMEG00000010552	nup35	100	66.349	Poecilia_mexicana
ENSSFOG00015002390	nup35	100	66.984	ENSPREG00000021005	nup35	100	66.984	Poecilia_reticulata
ENSSFOG00015002390	nup35	98	75.399	ENSPPYG00000012998	-	77	75.399	Pongo_abelii
ENSSFOG00015002390	nup35	78	73.585	ENSPCAG00000000605	NUP35	81	73.585	Procavia_capensis
ENSSFOG00015002390	nup35	99	74.603	ENSPCOG00000024097	NUP35	96	74.921	Propithecus_coquereli
ENSSFOG00015002390	nup35	99	73.968	ENSPVAG00000015908	NUP35	96	73.968	Pteropus_vampyrus
ENSSFOG00015002390	nup35	99	67.203	ENSPNYG00000012486	nup35	95	67.203	Pundamilia_nyererei
ENSSFOG00015002390	nup35	99	82.258	ENSPNAG00000005181	nup35	98	82.258	Pygocentrus_nattereri
ENSSFOG00015002390	nup35	99	74.204	ENSRNOG00000009290	Nup35	96	74.204	Rattus_norvegicus
ENSSFOG00015002390	nup35	99	74.841	ENSRBIG00000039427	NUP35	98	76.923	Rhinopithecus_bieti
ENSSFOG00015002390	nup35	99	74.841	ENSRROG00000026525	NUP35	98	76.923	Rhinopithecus_roxellana
ENSSFOG00015002390	nup35	99	74.841	ENSSBOG00000018676	NUP35	99	75.122	Saimiri_boliviensis_boliviensis
ENSSFOG00015002390	nup35	98	76.752	ENSSHAG00000009746	NUP35	96	76.752	Sarcophilus_harrisii
ENSSFOG00015002390	nup35	100	64.688	ENSSMAG00000015651	nup35	100	64.688	Scophthalmus_maximus
ENSSFOG00015002390	nup35	100	66.032	ENSSDUG00000013118	nup35	100	66.460	Seriola_dumerili
ENSSFOG00015002390	nup35	99	65.094	ENSSLDG00000018249	nup35	98	65.409	Seriola_lalandi_dorsalis
ENSSFOG00015002390	nup35	98	54.808	ENSSARG00000001535	-	100	54.808	Sorex_araneus
ENSSFOG00015002390	nup35	98	74.204	ENSSPUG00000018651	NUP35	96	74.204	Sphenodon_punctatus
ENSSFOG00015002390	nup35	100	65.823	ENSSPAG00000018264	nup35	100	65.615	Stegastes_partitus
ENSSFOG00015002390	nup35	99	74.603	ENSSSCG00000028949	NUP35	96	74.603	Sus_scrofa
ENSSFOG00015002390	nup35	99	73.817	ENSTGUG00000011278	NUP35	97	73.817	Taeniopygia_guttata
ENSSFOG00015002390	nup35	93	59.459	ENSTRUG00000014111	nup35	100	59.459	Takifugu_rubripes
ENSSFOG00015002390	nup35	99	53.822	ENSTNIG00000011568	nup35	95	53.822	Tetraodon_nigroviridis
ENSSFOG00015002390	nup35	99	71.111	ENSTBEG00000003328	NUP35	96	71.111	Tupaia_belangeri
ENSSFOG00015002390	nup35	99	63.492	ENSTTRG00000002512	NUP35	96	63.492	Tursiops_truncatus
ENSSFOG00015002390	nup35	61	77.083	ENSUAMG00000018696	-	93	77.083	Ursus_americanus
ENSSFOG00015002390	nup35	91	74.150	ENSUMAG00000017104	NUP35	96	74.150	Ursus_maritimus
ENSSFOG00015002390	nup35	99	74.603	ENSVPAG00000011898	NUP35	96	74.603	Vicugna_pacos
ENSSFOG00015002390	nup35	97	74.359	ENSVVUG00000016832	NUP35	100	74.359	Vulpes_vulpes
ENSSFOG00015002390	nup35	98	65.605	ENSXETG00000001335	nup35	95	65.605	Xenopus_tropicalis
ENSSFOG00015002390	nup35	100	66.250	ENSXMAG00000000409	nup35	100	65.443	Xiphophorus_maculatus