EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015002421 (Gene tree)
Gene ID: 108925023
Gene Symbol: emg1
Alias: zgc:136360
Full Name: EMG1%2C N1-specific pseudouridine methyltransferase
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 2614 bases
Position: chrKV410779.1:2351597-2354210
Accession: 108925023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015003731	EMG1	PF03587.14	1.6e-80	1	1
ENSSFOP00015003707	EMG1	PF03587.14	2.8e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015003770	-	2077	-	ENSSFOP00015003707	210 (aa)	-	-
ENSSFOT00015003794	-	1978	XM_018736727	ENSSFOP00015003731	239 (aa)	XP_018592243	A0A1W4YV16

Gene Model

Click here to download ENSSFOG00015002421's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015002421's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015002421	emg1	97	68.511	ENSG00000126749	EMG1	99	67.333	Homo_sapiens
ENSSFOG00015002421	emg1	98	81.702	ENSAPOG00000023213	emg1	99	81.702	Acanthochromis_polyacanthus
ENSSFOG00015002421	emg1	100	67.480	ENSAMEG00000013753	EMG1	100	67.480	Ailuropoda_melanoleuca
ENSSFOG00015002421	emg1	100	85.356	ENSACIG00000011786	emg1	100	85.356	Amphilophus_citrinellus
ENSSFOG00015002421	emg1	98	83.404	ENSAOCG00000006520	emg1	95	83.404	Amphiprion_ocellaris
ENSSFOG00015002421	emg1	98	83.404	ENSAPEG00000011094	emg1	95	83.404	Amphiprion_percula
ENSSFOG00015002421	emg1	100	84.100	ENSATEG00000021642	emg1	100	84.100	Anabas_testudineus
ENSSFOG00015002421	emg1	79	73.158	ENSAPLG00000005308	EMG1	100	73.158	Anas_platyrhynchos
ENSSFOG00015002421	emg1	88	71.905	ENSACAG00000007210	EMG1	91	71.905	Anolis_carolinensis
ENSSFOG00015002421	emg1	100	60.408	ENSANAG00000029536	-	100	60.408	Aotus_nancymaae
ENSSFOG00015002421	emg1	100	65.447	ENSANAG00000022855	-	100	65.447	Aotus_nancymaae
ENSSFOG00015002421	emg1	100	85.774	ENSACLG00000023688	emg1	100	85.774	Astatotilapia_calliptera
ENSSFOG00015002421	emg1	100	83.264	ENSAMXG00000018994	emg1	100	83.264	Astyanax_mexicanus
ENSSFOG00015002421	emg1	100	66.260	ENSBTAG00000013126	EMG1	70	66.260	Bos_taurus
ENSSFOG00015002421	emg1	94	50.885	WBGene00012652	Y39A1A.14	98	50.885	Caenorhabditis_elegans
ENSSFOG00015002421	emg1	100	66.122	ENSCJAG00000007120	EMG1	100	66.122	Callithrix_jacchus
ENSSFOG00015002421	emg1	100	67.480	ENSCAFG00000014424	EMG1	100	67.480	Canis_familiaris
ENSSFOG00015002421	emg1	100	67.480	ENSCAFG00020003127	EMG1	100	67.480	Canis_lupus_dingo
ENSSFOG00015002421	emg1	100	65.854	ENSCHIG00000003188	EMG1	100	65.854	Capra_hircus
ENSSFOG00015002421	emg1	64	74.342	ENSTSYG00000035847	EMG1	100	74.342	Carlito_syrichta
ENSSFOG00015002421	emg1	64	74.342	ENSCAPG00000011212	EMG1	100	74.342	Cavia_aperea
ENSSFOG00015002421	emg1	100	66.122	ENSCPOG00000025388	EMG1	100	66.122	Cavia_porcellus
ENSSFOG00015002421	emg1	64	53.947	ENSCCAG00000024274	-	100	53.947	Cebus_capucinus
ENSSFOG00015002421	emg1	62	59.184	ENSCCAG00000034889	-	85	59.184	Cebus_capucinus
ENSSFOG00015002421	emg1	100	66.122	ENSCCAG00000033309	-	100	66.122	Cebus_capucinus
ENSSFOG00015002421	emg1	100	67.073	ENSCATG00000016750	EMG1	100	67.073	Cercocebus_atys
ENSSFOG00015002421	emg1	100	66.939	ENSCLAG00000015067	EMG1	100	66.939	Chinchilla_lanigera
ENSSFOG00015002421	emg1	100	67.073	ENSCSAG00000010140	EMG1	100	67.073	Chlorocebus_sabaeus
ENSSFOG00015002421	emg1	100	67.886	ENSCHOG00000002886	EMG1	100	67.886	Choloepus_hoffmanni
ENSSFOG00015002421	emg1	82	70.520	ENSCPBG00000005167	EMG1	59	71.512	Chrysemys_picta_bellii
ENSSFOG00015002421	emg1	97	68.376	ENSCING00000022202	-	98	68.376	Ciona_intestinalis
ENSSFOG00015002421	emg1	97	65.665	ENSCSAVG00000005612	-	98	65.665	Ciona_savignyi
ENSSFOG00015002421	emg1	100	66.667	ENSCANG00000043101	-	100	66.667	Colobus_angolensis_palliatus
ENSSFOG00015002421	emg1	94	61.062	ENSCANG00000042498	-	100	68.794	Colobus_angolensis_palliatus
ENSSFOG00015002421	emg1	86	74.634	ENSCGRG00001018228	Emg1	84	74.634	Cricetulus_griseus_chok1gshd
ENSSFOG00015002421	emg1	86	74.634	ENSCGRG00000018238	Emg1	84	74.634	Cricetulus_griseus_crigri
ENSSFOG00015002421	emg1	100	81.818	ENSCSEG00000020136	emg1	100	81.818	Cynoglossus_semilaevis
ENSSFOG00015002421	emg1	98	83.051	ENSCVAG00000001164	emg1	99	83.051	Cyprinodon_variegatus
ENSSFOG00015002421	emg1	100	84.937	ENSDARG00000056914	emg1	100	84.937	Danio_rerio
ENSSFOG00015002421	emg1	88	73.810	ENSDNOG00000005533	EMG1	100	67.347	Dasypus_novemcinctus
ENSSFOG00015002421	emg1	80	73.822	ENSDORG00000009795	Emg1	81	73.822	Dipodomys_ordii
ENSSFOG00015002421	emg1	91	63.877	FBgn0029714	CG3527	89	63.877	Drosophila_melanogaster
ENSSFOG00015002421	emg1	64	50.327	ENSETEG00000009111	-	99	50.327	Echinops_telfairi
ENSSFOG00015002421	emg1	86	72.683	ENSEBUG00000008287	emg1	80	72.683	Eptatretus_burgeri
ENSSFOG00015002421	emg1	100	67.886	ENSEASG00005016018	EMG1	100	67.886	Equus_asinus_asinus
ENSSFOG00015002421	emg1	100	67.480	ENSECAG00000022412	EMG1	100	67.480	Equus_caballus
ENSSFOG00015002421	emg1	100	65.714	ENSEEUG00000000065	EMG1	100	65.714	Erinaceus_europaeus
ENSSFOG00015002421	emg1	100	67.886	ENSFCAG00000004288	EMG1	100	67.886	Felis_catus
ENSSFOG00015002421	emg1	86	74.272	ENSFALG00000004617	EMG1	98	67.234	Ficedula_albicollis
ENSSFOG00015002421	emg1	86	75.122	ENSFDAG00000011086	EMG1	84	75.122	Fukomys_damarensis
ENSSFOG00015002421	emg1	61	83.846	ENSFHEG00000014379	emg1	59	83.846	Fundulus_heteroclitus
ENSSFOG00015002421	emg1	58	66.906	ENSFHEG00000014307	emg1	82	66.906	Fundulus_heteroclitus
ENSSFOG00015002421	emg1	100	84.519	ENSGMOG00000011025	emg1	98	84.519	Gadus_morhua
ENSSFOG00015002421	emg1	86	74.272	ENSGALG00000014568	EMG1	89	74.272	Gallus_gallus
ENSSFOG00015002421	emg1	98	82.627	ENSGAFG00000014143	emg1	99	82.627	Gambusia_affinis
ENSSFOG00015002421	emg1	100	82.845	ENSGACG00000010330	emg1	98	82.845	Gasterosteus_aculeatus
ENSSFOG00015002421	emg1	79	72.105	ENSGAGG00000005641	EMG1	100	73.026	Gopherus_agassizii
ENSSFOG00015002421	emg1	97	68.085	ENSGGOG00000004287	EMG1	95	68.085	Gorilla_gorilla
ENSSFOG00015002421	emg1	100	85.774	ENSHBUG00000014862	emg1	100	85.774	Haplochromis_burtoni
ENSSFOG00015002421	emg1	86	75.122	ENSHGLG00000001300	EMG1	83	75.122	Heterocephalus_glaber_female
ENSSFOG00015002421	emg1	86	75.122	ENSHGLG00100011644	EMG1	83	75.122	Heterocephalus_glaber_male
ENSSFOG00015002421	emg1	100	83.682	ENSHCOG00000017870	emg1	100	83.682	Hippocampus_comes
ENSSFOG00015002421	emg1	100	83.682	ENSIPUG00000008261	emg1	100	83.682	Ictalurus_punctatus
ENSSFOG00015002421	emg1	86	75.610	ENSSTOG00000000387	EMG1	84	75.610	Ictidomys_tridecemlineatus
ENSSFOG00015002421	emg1	98	63.380	ENSJJAG00000018448	Emg1	83	75.122	Jaculus_jaculus
ENSSFOG00015002421	emg1	100	84.583	ENSKMAG00000007069	emg1	100	84.583	Kryptolebias_marmoratus
ENSSFOG00015002421	emg1	100	84.519	ENSLBEG00000007424	emg1	100	84.519	Labrus_bergylta
ENSSFOG00015002421	emg1	100	79.079	ENSLOCG00000008451	emg1	98	79.079	Lepisosteus_oculatus
ENSSFOG00015002421	emg1	97	69.362	ENSLAFG00000001314	EMG1	95	69.362	Loxodonta_africana
ENSSFOG00015002421	emg1	100	67.073	ENSMFAG00000037142	EMG1	100	67.073	Macaca_fascicularis
ENSSFOG00015002421	emg1	100	67.073	ENSMMUG00000010207	EMG1	100	67.073	Macaca_mulatta
ENSSFOG00015002421	emg1	100	67.073	ENSMNEG00000040907	EMG1	100	67.073	Macaca_nemestrina
ENSSFOG00015002421	emg1	100	67.073	ENSMLEG00000026029	EMG1	100	67.073	Mandrillus_leucophaeus
ENSSFOG00015002421	emg1	100	84.937	ENSMAMG00000001888	emg1	100	84.937	Mastacembelus_armatus
ENSSFOG00015002421	emg1	100	85.774	ENSMZEG00005017546	emg1	100	85.774	Maylandia_zebra
ENSSFOG00015002421	emg1	86	74.757	ENSMGAG00000014145	EMG1	85	74.757	Meleagris_gallopavo
ENSSFOG00015002421	emg1	100	66.667	ENSMAUG00000011093	Emg1	100	66.667	Mesocricetus_auratus
ENSSFOG00015002421	emg1	100	67.480	ENSMICG00000001790	EMG1	100	67.480	Microcebus_murinus
ENSSFOG00015002421	emg1	100	66.122	ENSMOCG00000022570	Emg1	100	66.122	Microtus_ochrogaster
ENSSFOG00015002421	emg1	100	84.100	ENSMMOG00000016090	emg1	100	84.100	Mola_mola
ENSSFOG00015002421	emg1	86	74.146	ENSMODG00000018161	EMG1	82	74.146	Monodelphis_domestica
ENSSFOG00015002421	emg1	100	83.682	ENSMALG00000022477	emg1	100	83.682	Monopterus_albus
ENSSFOG00015002421	emg1	100	65.854	MGP_CAROLIEiJ_G0028844	Emg1	100	65.854	Mus_caroli
ENSSFOG00015002421	emg1	100	65.714	ENSMUSG00000004268	Emg1	100	65.714	Mus_musculus
ENSSFOG00015002421	emg1	100	67.073	MGP_PahariEiJ_G0022605	Emg1	100	67.073	Mus_pahari
ENSSFOG00015002421	emg1	100	66.260	MGP_SPRETEiJ_G0029886	Emg1	100	66.260	Mus_spretus
ENSSFOG00015002421	emg1	100	67.480	ENSMPUG00000016763	EMG1	100	67.480	Mustela_putorius_furo
ENSSFOG00015002421	emg1	87	72.038	ENSMLUG00000009196	EMG1	85	72.038	Myotis_lucifugus
ENSSFOG00015002421	emg1	100	67.220	ENSNGAG00000022592	Emg1	100	67.220	Nannospalax_galili
ENSSFOG00015002421	emg1	100	85.774	ENSNBRG00000001192	emg1	100	85.774	Neolamprologus_brichardi
ENSSFOG00015002421	emg1	100	67.073	ENSNLEG00000005080	EMG1	100	67.073	Nomascus_leucogenys
ENSSFOG00015002421	emg1	78	73.797	ENSMEUG00000000831	EMG1	82	73.797	Notamacropus_eugenii
ENSSFOG00015002421	emg1	79	72.487	ENSOPRG00000016878	-	100	72.487	Ochotona_princeps
ENSSFOG00015002421	emg1	55	81.034	ENSOPRG00000004071	-	73	81.034	Ochotona_princeps
ENSSFOG00015002421	emg1	100	65.164	ENSODEG00000004059	EMG1	100	65.164	Octodon_degus
ENSSFOG00015002421	emg1	100	84.519	ENSONIG00000012893	emg1	99	84.519	Oreochromis_niloticus
ENSSFOG00015002421	emg1	86	75.122	ENSOCUG00000003603	EMG1	84	75.122	Oryctolagus_cuniculus
ENSSFOG00015002421	emg1	100	83.682	ENSORLG00000012146	emg1	97	83.682	Oryzias_latipes
ENSSFOG00015002421	emg1	100	83.682	ENSORLG00020005499	emg1	100	83.682	Oryzias_latipes_hni
ENSSFOG00015002421	emg1	100	83.682	ENSORLG00015011535	emg1	100	83.682	Oryzias_latipes_hsok
ENSSFOG00015002421	emg1	100	83.264	ENSOMEG00000012687	emg1	100	83.264	Oryzias_melastigma
ENSSFOG00015002421	emg1	87	74.163	ENSOGAG00000006975	EMG1	85	74.163	Otolemur_garnettii
ENSSFOG00015002421	emg1	100	65.323	ENSOARG00000004923	EMG1	100	65.323	Ovis_aries
ENSSFOG00015002421	emg1	100	67.480	ENSPPAG00000033046	EMG1	100	67.480	Pan_paniscus
ENSSFOG00015002421	emg1	100	67.480	ENSPPRG00000012350	EMG1	100	67.480	Panthera_pardus
ENSSFOG00015002421	emg1	100	67.480	ENSPTIG00000000358	EMG1	100	67.480	Panthera_tigris_altaica
ENSSFOG00015002421	emg1	100	67.480	ENSPTRG00000048050	EMG1	100	67.480	Pan_troglodytes
ENSSFOG00015002421	emg1	100	67.886	ENSPANG00000005523	-	100	67.886	Papio_anubis
ENSSFOG00015002421	emg1	100	67.480	ENSPANG00000019398	-	100	67.480	Papio_anubis
ENSSFOG00015002421	emg1	100	86.192	ENSPKIG00000025303	emg1	100	86.192	Paramormyrops_kingsleyae
ENSSFOG00015002421	emg1	93	68.919	ENSPSIG00000011094	EMG1	94	68.919	Pelodiscus_sinensis
ENSSFOG00015002421	emg1	99	83.966	ENSPMGG00000019918	emg1	99	83.966	Periophthalmus_magnuspinnatus
ENSSFOG00015002421	emg1	100	66.667	ENSPEMG00000010244	Emg1	100	66.667	Peromyscus_maniculatus_bairdii
ENSSFOG00015002421	emg1	86	73.171	ENSPCIG00000002814	EMG1	84	73.171	Phascolarctos_cinereus
ENSSFOG00015002421	emg1	98	82.627	ENSPFOG00000013034	emg1	99	82.627	Poecilia_formosa
ENSSFOG00015002421	emg1	98	82.627	ENSPLAG00000000125	emg1	99	82.627	Poecilia_latipinna
ENSSFOG00015002421	emg1	98	83.051	ENSPMEG00000016802	emg1	99	83.051	Poecilia_mexicana
ENSSFOG00015002421	emg1	99	81.590	ENSPREG00000010409	emg1	82	81.590	Poecilia_reticulata
ENSSFOG00015002421	emg1	100	67.480	ENSPPYG00000004215	EMG1	100	67.480	Pongo_abelii
ENSSFOG00015002421	emg1	86	62.927	ENSPCAG00000012368	EMG1	81	62.927	Procavia_capensis
ENSSFOG00015002421	emg1	100	67.073	ENSPCOG00000028560	EMG1	100	67.073	Propithecus_coquereli
ENSSFOG00015002421	emg1	87	73.206	ENSPVAG00000006030	EMG1	85	73.206	Pteropus_vampyrus
ENSSFOG00015002421	emg1	100	85.774	ENSPNYG00000023172	emg1	100	85.774	Pundamilia_nyererei
ENSSFOG00015002421	emg1	100	85.356	ENSPNAG00000019953	emg1	100	85.356	Pygocentrus_nattereri
ENSSFOG00015002421	emg1	100	67.073	ENSRNOG00000012828	Emg1	100	67.073	Rattus_norvegicus
ENSSFOG00015002421	emg1	100	67.480	ENSRBIG00000031315	EMG1	100	67.480	Rhinopithecus_bieti
ENSSFOG00015002421	emg1	100	67.480	ENSRROG00000032961	EMG1	100	67.480	Rhinopithecus_roxellana
ENSSFOG00015002421	emg1	88	50.685	YLR186W	EMG1	87	50.685	Saccharomyces_cerevisiae
ENSSFOG00015002421	emg1	100	66.531	ENSSBOG00000029143	-	100	66.531	Saimiri_boliviensis_boliviensis
ENSSFOG00015002421	emg1	97	48.718	ENSSBOG00000022895	-	96	48.718	Saimiri_boliviensis_boliviensis
ENSSFOG00015002421	emg1	86	74.146	ENSSHAG00000016428	EMG1	84	74.146	Sarcophilus_harrisii
ENSSFOG00015002421	emg1	97	85.776	ENSSMAG00000011806	emg1	97	85.776	Scophthalmus_maximus
ENSSFOG00015002421	emg1	100	84.937	ENSSDUG00000011345	emg1	95	84.937	Seriola_dumerili
ENSSFOG00015002421	emg1	100	84.937	ENSSLDG00000023439	emg1	95	84.937	Seriola_lalandi_dorsalis
ENSSFOG00015002421	emg1	86	61.951	ENSSARG00000002227	EMG1	84	61.951	Sorex_araneus
ENSSFOG00015002421	emg1	87	70.813	ENSSPUG00000014446	EMG1	89	70.813	Sphenodon_punctatus
ENSSFOG00015002421	emg1	98	83.333	ENSSPAG00000005460	emg1	99	83.333	Stegastes_partitus
ENSSFOG00015002421	emg1	100	66.667	ENSSSCG00000026812	EMG1	100	66.667	Sus_scrofa
ENSSFOG00015002421	emg1	86	73.786	ENSTGUG00000013271	EMG1	99	73.786	Taeniopygia_guttata
ENSSFOG00015002421	emg1	100	82.845	ENSTRUG00000001906	emg1	100	82.845	Takifugu_rubripes
ENSSFOG00015002421	emg1	100	83.264	ENSTNIG00000008047	emg1	98	83.264	Tetraodon_nigroviridis
ENSSFOG00015002421	emg1	87	74.163	ENSTBEG00000015406	EMG1	99	74.163	Tupaia_belangeri
ENSSFOG00015002421	emg1	100	55.285	ENSTTRG00000004810	EMG1	100	55.285	Tursiops_truncatus
ENSSFOG00015002421	emg1	100	67.480	ENSUAMG00000026959	EMG1	100	67.480	Ursus_americanus
ENSSFOG00015002421	emg1	100	67.480	ENSUMAG00000003248	EMG1	100	67.480	Ursus_maritimus
ENSSFOG00015002421	emg1	88	73.333	ENSVVUG00000010807	EMG1	100	67.480	Vulpes_vulpes
ENSSFOG00015002421	emg1	86	74.757	ENSXETG00000023917	emg1	99	74.757	Xenopus_tropicalis
ENSSFOG00015002421	emg1	98	82.627	ENSXMAG00000011508	emg1	99	82.627	Xiphophorus_maculatus