EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015002508 (Gene tree)
Gene ID: 108932496
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 2681 bases
Position: chrKV410994.1:1581405-1584085
Accession: 108932496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015003841	Glu-tRNAGln	PF02686.15	4.7e-08	1	1
ENSSFOP00015003829	Glu-tRNAGln	PF02686.15	4.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015003905	-	699	XM_018748933	ENSSFOP00015003841	158 (aa)	XP_018604449	-
ENSSFOT00015003893	-	573	-	ENSSFOP00015003829	190 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015002508's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm00970	Aminoacyl-tRNA biosynthesis	KEGG
sfm01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015002508's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015002508	gatc	84	44.361	ENSG00000257218	GATC	100	63.830	Homo_sapiens
ENSSFOG00015002508	gatc	59	57.447	ENSAMEG00000013298	-	76	55.340	Ailuropoda_melanoleuca
ENSSFOG00015002508	gatc	62	75.510	ENSACIG00000016853	gatc	71	75.510	Amphilophus_citrinellus
ENSSFOG00015002508	gatc	66	74.286	ENSAOCG00000014641	gatc	98	72.131	Amphiprion_ocellaris
ENSSFOG00015002508	gatc	70	73.636	ENSAPEG00000023411	gatc	63	71.311	Amphiprion_percula
ENSSFOG00015002508	gatc	63	76.000	ENSATEG00000009237	gatc	83	76.000	Anabas_testudineus
ENSSFOG00015002508	gatc	54	68.235	ENSACAG00000002868	-	70	69.474	Anolis_carolinensis
ENSSFOG00015002508	gatc	64	50.806	ENSANAG00000034389	-	90	50.806	Aotus_nancymaae
ENSSFOG00015002508	gatc	91	59.864	ENSACLG00000026251	gatc	88	58.721	Astatotilapia_calliptera
ENSSFOG00015002508	gatc	71	80.357	ENSAMXG00000004252	gatc	63	70.073	Astyanax_mexicanus
ENSSFOG00015002508	gatc	58	60.440	ENSBTAG00000012791	GATC	70	61.053	Bos_taurus
ENSSFOG00015002508	gatc	69	34.862	WBGene00013433	Y66D12A.7	62	34.862	Caenorhabditis_elegans
ENSSFOG00015002508	gatc	82	44.615	ENSCJAG00000001183	-	57	55.340	Callithrix_jacchus
ENSSFOG00015002508	gatc	59	57.447	ENSCAFG00000010311	-	76	56.311	Canis_familiaris
ENSSFOG00015002508	gatc	59	57.447	ENSCAFG00020020606	-	76	56.311	Canis_lupus_dingo
ENSSFOG00015002508	gatc	57	61.111	ENSCHIG00000019423	-	80	54.128	Capra_hircus
ENSSFOG00015002508	gatc	84	45.113	ENSTSYG00000006845	-	89	45.113	Carlito_syrichta
ENSSFOG00015002508	gatc	84	46.377	ENSCPOG00000026436	-	94	46.377	Cavia_porcellus
ENSSFOG00015002508	gatc	82	44.615	ENSCCAG00000022235	-	87	44.615	Cebus_capucinus
ENSSFOG00015002508	gatc	84	44.361	ENSCATG00000038807	GATC	89	44.361	Cercocebus_atys
ENSSFOG00015002508	gatc	59	55.319	ENSCLAG00000011015	-	62	56.566	Chinchilla_lanigera
ENSSFOG00015002508	gatc	84	44.361	ENSCSAG00000002259	GATC	89	44.361	Chlorocebus_sabaeus
ENSSFOG00015002508	gatc	59	57.447	ENSCHOG00000009235	-	93	51.181	Choloepus_hoffmanni
ENSSFOG00015002508	gatc	77	59.016	ENSCPBG00000011342	-	65	59.016	Chrysemys_picta_bellii
ENSSFOG00015002508	gatc	80	47.244	ENSCANG00000031071	GATC	89	48.837	Colobus_angolensis_palliatus
ENSSFOG00015002508	gatc	75	48.387	ENSCGRG00001005508	-	61	48.387	Cricetulus_griseus_chok1gshd
ENSSFOG00015002508	gatc	75	50.806	ENSCGRG00001019220	-	80	50.806	Cricetulus_griseus_chok1gshd
ENSSFOG00015002508	gatc	75	47.581	ENSCGRG00000019471	GATC	61	47.581	Cricetulus_griseus_crigri
ENSSFOG00015002508	gatc	75	50.806	ENSCGRG00000004184	-	80	50.806	Cricetulus_griseus_crigri
ENSSFOG00015002508	gatc	86	63.971	ENSCSEG00000007798	gatc	62	69.919	Cynoglossus_semilaevis
ENSSFOG00015002508	gatc	76	56.944	ENSCSEG00000016618	-	80	56.944	Cynoglossus_semilaevis
ENSSFOG00015002508	gatc	70	79.091	ENSCVAG00000004364	gatc	59	80.180	Cyprinodon_variegatus
ENSSFOG00015002508	gatc	90	62.238	ENSDARG00000056855	gatc	78	62.238	Danio_rerio
ENSSFOG00015002508	gatc	59	59.574	ENSDNOG00000012593	-	55	61.111	Dasypus_novemcinctus
ENSSFOG00015002508	gatc	70	40.541	FBgn0064115	GatC	97	38.889	Drosophila_melanogaster
ENSSFOG00015002508	gatc	57	50.000	ENSETEG00000002604	-	83	46.903	Echinops_telfairi
ENSSFOG00015002508	gatc	57	46.667	ENSEBUG00000008772	gatc	54	45.745	Eptatretus_burgeri
ENSSFOG00015002508	gatc	59	58.511	ENSECAG00000011118	-	76	57.282	Equus_caballus
ENSSFOG00015002508	gatc	59	53.191	ENSEEUG00000011638	-	76	53.922	Erinaceus_europaeus
ENSSFOG00015002508	gatc	77	65.600	ENSELUG00000012608	gatc	82	71.429	Esox_lucius
ENSSFOG00015002508	gatc	59	56.383	ENSFCAG00000038718	-	76	55.340	Felis_catus
ENSSFOG00015002508	gatc	59	61.702	ENSFALG00000007564	-	76	57.759	Ficedula_albicollis
ENSSFOG00015002508	gatc	73	49.275	ENSFDAG00000018720	-	99	49.275	Fukomys_damarensis
ENSSFOG00015002508	gatc	70	75.455	ENSFHEG00000014992	GATC	60	77.477	Fundulus_heteroclitus
ENSSFOG00015002508	gatc	75	62.185	ENSGMOG00000008742	gatc	75	66.942	Gadus_morhua
ENSSFOG00015002508	gatc	56	58.491	ENSGALG00000007195	-	87	54.400	Gallus_gallus
ENSSFOG00015002508	gatc	72	76.316	ENSGAFG00000012801	gatc	72	76.316	Gambusia_affinis
ENSSFOG00015002508	gatc	70	75.676	ENSGACG00000008973	gatc	57	76.577	Gasterosteus_aculeatus
ENSSFOG00015002508	gatc	78	57.692	ENSGAGG00000016018	-	71	57.692	Gopherus_agassizii
ENSSFOG00015002508	gatc	82	44.961	ENSGGOG00000026821	GATC	91	44.961	Gorilla_gorilla
ENSSFOG00015002508	gatc	91	60.544	ENSHBUG00000006827	gatc	88	59.302	Haplochromis_burtoni
ENSSFOG00015002508	gatc	84	45.522	ENSHGLG00000011394	GATC	89	45.522	Heterocephalus_glaber_female
ENSSFOG00015002508	gatc	84	44.030	ENSHGLG00100018850	-	89	44.030	Heterocephalus_glaber_male
ENSSFOG00015002508	gatc	69	70.642	ENSHCOG00000009209	gatc	98	68.000	Hippocampus_comes
ENSSFOG00015002508	gatc	82	72.093	ENSIPUG00000023072	gatc	58	76.316	Ictalurus_punctatus
ENSSFOG00015002508	gatc	59	56.383	ENSSTOG00000025740	-	65	57.576	Ictidomys_tridecemlineatus
ENSSFOG00015002508	gatc	63	52.066	ENSJJAG00000000369	Gatc	77	52.066	Jaculus_jaculus
ENSSFOG00015002508	gatc	69	67.890	ENSKMAG00000016476	gatc	93	69.231	Kryptolebias_marmoratus
ENSSFOG00015002508	gatc	78	68.293	ENSLBEG00000007603	gatc	67	71.311	Labrus_bergylta
ENSSFOG00015002508	gatc	80	55.474	ENSLACG00000018239	-	71	55.474	Latimeria_chalumnae
ENSSFOG00015002508	gatc	73	72.414	ENSLOCG00000004056	gatc	68	71.200	Lepisosteus_oculatus
ENSSFOG00015002508	gatc	57	60.000	ENSLAFG00000006384	-	61	59.140	Loxodonta_africana
ENSSFOG00015002508	gatc	84	44.361	ENSMFAG00000034197	GATC	89	44.361	Macaca_fascicularis
ENSSFOG00015002508	gatc	84	44.361	ENSMMUG00000046665	GATC	89	44.361	Macaca_mulatta
ENSSFOG00015002508	gatc	84	44.361	ENSMNEG00000034653	GATC	89	44.361	Macaca_nemestrina
ENSSFOG00015002508	gatc	84	45.113	ENSMLEG00000039862	GATC	89	45.113	Mandrillus_leucophaeus
ENSSFOG00015002508	gatc	90	64.085	ENSMAMG00000015851	gatc	71	70.229	Mastacembelus_armatus
ENSSFOG00015002508	gatc	91	59.864	ENSMZEG00005016072	gatc	88	58.721	Maylandia_zebra
ENSSFOG00015002508	gatc	56	60.377	ENSMGAG00000008733	-	100	60.377	Meleagris_gallopavo
ENSSFOG00015002508	gatc	84	48.201	ENSMAUG00000012756	Gatc	90	48.201	Mesocricetus_auratus
ENSSFOG00015002508	gatc	84	47.368	ENSMICG00000008669	-	89	47.368	Microcebus_murinus
ENSSFOG00015002508	gatc	92	45.578	ENSMOCG00000005051	Gatc	90	45.578	Microtus_ochrogaster
ENSSFOG00015002508	gatc	70	73.636	ENSMMOG00000017695	gatc	95	73.684	Mola_mola
ENSSFOG00015002508	gatc	61	58.763	ENSMODG00000003152	-	73	61.458	Monodelphis_domestica
ENSSFOG00015002508	gatc	59	59.574	MGP_CAROLIEiJ_G0027623	Gatc	64	60.606	Mus_caroli
ENSSFOG00015002508	gatc	59	59.574	ENSMUSG00000029536	Gatc	77	54.545	Mus_musculus
ENSSFOG00015002508	gatc	61	58.586	MGP_PahariEiJ_G0024203	Gatc	64	61.616	Mus_pahari
ENSSFOG00015002508	gatc	64	53.719	MGP_SPRETEiJ_G0028621	Gatc	77	53.719	Mus_spretus
ENSSFOG00015002508	gatc	59	57.447	ENSMPUG00000003183	-	76	56.311	Mustela_putorius_furo
ENSSFOG00015002508	gatc	56	56.180	ENSMLUG00000010341	-	94	55.789	Myotis_lucifugus
ENSSFOG00015002508	gatc	69	50.758	ENSNGAG00000004734	Gatc	84	50.758	Nannospalax_galili
ENSSFOG00015002508	gatc	92	60.667	ENSNBRG00000007810	gatc	88	59.302	Neolamprologus_brichardi
ENSSFOG00015002508	gatc	84	45.865	ENSNLEG00000015651	GATC	89	45.865	Nomascus_leucogenys
ENSSFOG00015002508	gatc	62	56.122	ENSMEUG00000004064	-	81	57.000	Notamacropus_eugenii
ENSSFOG00015002508	gatc	58	61.957	ENSOPRG00000004226	-	76	61.165	Ochotona_princeps
ENSSFOG00015002508	gatc	82	46.512	ENSODEG00000005919	-	89	46.512	Octodon_degus
ENSSFOG00015002508	gatc	70	71.429	ENSONIG00000013444	gatc	86	70.161	Oreochromis_niloticus
ENSSFOG00015002508	gatc	58	59.341	ENSOCUG00000009867	-	78	56.604	Oryctolagus_cuniculus
ENSSFOG00015002508	gatc	65	71.569	ENSORLG00000007156	gatc	92	71.171	Oryzias_latipes
ENSSFOG00015002508	gatc	70	71.818	ENSORLG00020014991	gatc	65	68.033	Oryzias_latipes_hni
ENSSFOG00015002508	gatc	70	71.818	ENSORLG00015003450	gatc	65	68.033	Oryzias_latipes_hsok
ENSSFOG00015002508	gatc	73	69.828	ENSOMEG00000002280	gatc	65	68.033	Oryzias_melastigma
ENSSFOG00015002508	gatc	58	56.044	ENSOGAG00000003850	-	99	53.704	Otolemur_garnettii
ENSSFOG00015002508	gatc	60	58.000	ENSOARG00000012338	-	84	54.128	Ovis_aries
ENSSFOG00015002508	gatc	84	44.361	ENSPPAG00000029164	GATC	89	44.361	Pan_paniscus
ENSSFOG00015002508	gatc	59	56.383	ENSPPRG00000000929	-	76	55.340	Panthera_pardus
ENSSFOG00015002508	gatc	59	56.383	ENSPTIG00000009889	-	76	55.340	Panthera_tigris_altaica
ENSSFOG00015002508	gatc	84	43.609	ENSPTRG00000049887	GATC	89	43.609	Pan_troglodytes
ENSSFOG00015002508	gatc	84	44.361	ENSPANG00000033975	GATC	89	44.361	Papio_anubis
ENSSFOG00015002508	gatc	84	71.533	ENSPKIG00000024856	gatc	71	71.533	Paramormyrops_kingsleyae
ENSSFOG00015002508	gatc	59	62.366	ENSPSIG00000011112	-	89	63.462	Pelodiscus_sinensis
ENSSFOG00015002508	gatc	66	75.238	ENSPMGG00000018829	gatc	78	71.311	Periophthalmus_magnuspinnatus
ENSSFOG00015002508	gatc	57	60.000	ENSPEMG00000000665	Gatc	64	60.606	Peromyscus_maniculatus_bairdii
ENSSFOG00015002508	gatc	59	59.574	ENSPCIG00000025999	-	67	56.311	Phascolarctos_cinereus
ENSSFOG00015002508	gatc	91	56.425	ENSPFOG00000011603	gatc	94	56.425	Poecilia_formosa
ENSSFOG00015002508	gatc	91	55.866	ENSPLAG00000002471	gatc	94	55.866	Poecilia_latipinna
ENSSFOG00015002508	gatc	91	55.866	ENSPMEG00000020958	gatc	94	55.866	Poecilia_mexicana
ENSSFOG00015002508	gatc	58	77.477	ENSPREG00000022256	gatc	75	77.477	Poecilia_reticulata
ENSSFOG00015002508	gatc	59	55.319	ENSPPYG00000005030	GATC	80	53.636	Pongo_abelii
ENSSFOG00015002508	gatc	66	53.333	ENSPCAG00000013864	-	89	51.163	Procavia_capensis
ENSSFOG00015002508	gatc	82	47.287	ENSPCOG00000009493	-	91	47.287	Propithecus_coquereli
ENSSFOG00015002508	gatc	81	46.512	ENSPCOG00000015558	-	90	46.512	Propithecus_coquereli
ENSSFOG00015002508	gatc	84	45.113	ENSPVAG00000002228	-	90	45.113	Pteropus_vampyrus
ENSSFOG00015002508	gatc	91	60.544	ENSPNYG00000016015	gatc	88	59.302	Pundamilia_nyererei
ENSSFOG00015002508	gatc	71	79.464	ENSPNAG00000001239	gatc	59	71.429	Pygocentrus_nattereri
ENSSFOG00015002508	gatc	87	46.715	ENSRNOG00000001161	Gatc	85	46.715	Rattus_norvegicus
ENSSFOG00015002508	gatc	87	46.715	ENSRNOG00000045621	Gatc	86	46.715	Rattus_norvegicus
ENSSFOG00015002508	gatc	80	47.244	ENSRBIG00000033363	GATC	89	48.837	Rhinopithecus_bieti
ENSSFOG00015002508	gatc	80	47.244	ENSRROG00000042802	GATC	89	48.837	Rhinopithecus_roxellana
ENSSFOG00015002508	gatc	84	44.361	ENSSBOG00000033750	-	89	44.361	Saimiri_boliviensis_boliviensis
ENSSFOG00015002508	gatc	59	58.511	ENSSHAG00000005745	-	100	54.717	Sarcophilus_harrisii
ENSSFOG00015002508	gatc	70	76.364	ENSSMAG00000014280	gatc	69	72.800	Scophthalmus_maximus
ENSSFOG00015002508	gatc	97	57.962	ENSSDUG00000012206	gatc	79	57.962	Seriola_dumerili
ENSSFOG00015002508	gatc	97	57.962	ENSSLDG00000025159	gatc	78	57.962	Seriola_lalandi_dorsalis
ENSSFOG00015002508	gatc	77	54.545	ENSSPUG00000015693	-	72	64.646	Sphenodon_punctatus
ENSSFOG00015002508	gatc	70	77.273	ENSSPAG00000011860	gatc	58	77.477	Stegastes_partitus
ENSSFOG00015002508	gatc	60	61.053	ENSSSCG00000032747	-	68	62.366	Sus_scrofa
ENSSFOG00015002508	gatc	57	63.333	ENSTGUG00000009561	-	99	61.682	Taeniopygia_guttata
ENSSFOG00015002508	gatc	70	74.775	ENSTRUG00000021596	gatc	62	71.311	Takifugu_rubripes
ENSSFOG00015002508	gatc	70	74.775	ENSTNIG00000015879	gatc	59	72.951	Tetraodon_nigroviridis
ENSSFOG00015002508	gatc	82	48.062	ENSTTRG00000000144	GATC	86	48.062	Tursiops_truncatus
ENSSFOG00015002508	gatc	59	57.447	ENSUAMG00000015523	-	76	56.311	Ursus_americanus
ENSSFOG00015002508	gatc	59	57.447	ENSVVUG00000021055	-	76	56.311	Vulpes_vulpes
ENSSFOG00015002508	gatc	60	78.070	ENSXCOG00000017087	gatc	83	78.070	Xiphophorus_couchianus
ENSSFOG00015002508	gatc	70	76.364	ENSXMAG00000018267	gatc	60	79.279	Xiphophorus_maculatus