EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015002709 (Gene tree)
Gene ID: 108929226
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 4492 bases
Position: chrKV410896.1:3922067-3926558
Accession: 108929226
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015004190	RNase_H	PF00075.24	6.5e-40	1	1
ENSSFOP00015004172	RNase_H	PF00075.24	9.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015004258	-	798	-	ENSSFOP00015004190	265 (aa)	-	-
ENSSFOT00015004239	-	2069	XM_018743594	ENSSFOP00015004172	303 (aa)	XP_018599110	A0A1W4ZED9

Gene Model

Click here to download ENSSFOG00015002709's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015002709's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015002709	rnaseh1	98	51.178	ENSG00000171865	RNASEH1	97	51.178	Homo_sapiens
ENSSFOG00015002709	rnaseh1	99	58.703	ENSAPOG00000000412	rnaseh1	97	58.703	Acanthochromis_polyacanthus
ENSSFOG00015002709	rnaseh1	91	50.903	ENSAMEG00000018433	RNASEH1	98	49.296	Ailuropoda_melanoleuca
ENSSFOG00015002709	rnaseh1	100	61.806	ENSACIG00000014666	rnaseh1	96	60.064	Amphilophus_citrinellus
ENSSFOG00015002709	rnaseh1	100	59.184	ENSAOCG00000015210	rnaseh1	98	59.184	Amphiprion_ocellaris
ENSSFOG00015002709	rnaseh1	100	60.204	ENSAPEG00000014104	rnaseh1	98	60.204	Amphiprion_percula
ENSSFOG00015002709	rnaseh1	100	62.585	ENSATEG00000000598	rnaseh1	97	62.245	Anabas_testudineus
ENSSFOG00015002709	rnaseh1	87	53.030	ENSAPLG00000001961	RNASEH1	100	51.103	Anas_platyrhynchos
ENSSFOG00015002709	rnaseh1	80	62.416	ENSACAG00000016857	rnaseh1	93	47.541	Anolis_carolinensis
ENSSFOG00015002709	rnaseh1	91	53.455	ENSANAG00000024055	RNASEH1	90	53.818	Aotus_nancymaae
ENSSFOG00015002709	rnaseh1	100	58.194	ENSACLG00000006741	rnaseh1	96	59.355	Astatotilapia_calliptera
ENSSFOG00015002709	rnaseh1	99	58.123	ENSAMXG00000042940	rnaseh1	97	58.214	Astyanax_mexicanus
ENSSFOG00015002709	rnaseh1	91	50.534	ENSBTAG00000016235	RNASEH1	92	50.534	Bos_taurus
ENSSFOG00015002709	rnaseh1	91	40.081	WBGene00004382	rnh-1.0	97	38.211	Caenorhabditis_elegans
ENSSFOG00015002709	rnaseh1	91	51.971	ENSCJAG00000035450	RNASEH1	90	51.613	Callithrix_jacchus
ENSSFOG00015002709	rnaseh1	97	50.357	ENSCAFG00000003259	RNASEH1	98	50.000	Canis_familiaris
ENSSFOG00015002709	rnaseh1	55	65.306	ENSCAFG00020004994	RNASEH1	97	64.238	Canis_lupus_dingo
ENSSFOG00015002709	rnaseh1	83	40.873	ENSCHIG00000022230	-	98	40.079	Capra_hircus
ENSSFOG00015002709	rnaseh1	91	51.449	ENSCHIG00000022264	-	90	52.140	Capra_hircus
ENSSFOG00015002709	rnaseh1	90	52.326	ENSTSYG00000012926	RNASEH1	89	50.903	Carlito_syrichta
ENSSFOG00015002709	rnaseh1	85	51.737	ENSCAPG00000004813	RNASEH1	99	51.737	Cavia_aperea
ENSSFOG00015002709	rnaseh1	91	52.174	ENSCPOG00000022278	Rnaseh1	87	52.174	Cavia_porcellus
ENSSFOG00015002709	rnaseh1	97	52.159	ENSCCAG00000038017	RNASEH1	98	52.159	Cebus_capucinus
ENSSFOG00015002709	rnaseh1	98	50.505	ENSCATG00000016515	-	97	50.505	Cercocebus_atys
ENSSFOG00015002709	rnaseh1	91	47.636	ENSCATG00000016818	-	89	47.636	Cercocebus_atys
ENSSFOG00015002709	rnaseh1	91	50.909	ENSCLAG00000002440	RNASEH1	90	50.909	Chinchilla_lanigera
ENSSFOG00015002709	rnaseh1	91	53.091	ENSCSAG00000006943	RNASEH1	97	50.168	Chlorocebus_sabaeus
ENSSFOG00015002709	rnaseh1	56	64.430	ENSCHOG00000008547	RNASEH1	76	65.584	Choloepus_hoffmanni
ENSSFOG00015002709	rnaseh1	91	53.261	ENSCPBG00000021620	RNASEH1	99	53.521	Chrysemys_picta_bellii
ENSSFOG00015002709	rnaseh1	98	37.785	ENSCING00000014054	-	98	38.699	Ciona_intestinalis
ENSSFOG00015002709	rnaseh1	77	36.325	ENSCSAVG00000000009	-	96	38.009	Ciona_savignyi
ENSSFOG00015002709	rnaseh1	98	50.505	ENSCANG00000037763	RNASEH1	97	50.667	Colobus_angolensis_palliatus
ENSSFOG00015002709	rnaseh1	91	51.273	ENSCGRG00001008950	Rnaseh1	90	50.973	Cricetulus_griseus_chok1gshd
ENSSFOG00015002709	rnaseh1	91	51.273	ENSCGRG00000006029	Rnaseh1	90	50.973	Cricetulus_griseus_crigri
ENSSFOG00015002709	rnaseh1	99	59.857	ENSCSEG00000005741	rnaseh1	95	60.357	Cynoglossus_semilaevis
ENSSFOG00015002709	rnaseh1	99	62.092	ENSCVAG00000018717	rnaseh1	97	62.092	Cyprinodon_variegatus
ENSSFOG00015002709	rnaseh1	92	62.633	ENSDARG00000042571	rnaseh1	98	59.516	Danio_rerio
ENSSFOG00015002709	rnaseh1	97	48.754	ENSDNOG00000016056	RNASEH1	95	48.754	Dasypus_novemcinctus
ENSSFOG00015002709	rnaseh1	91	49.275	ENSDORG00000000704	Rnaseh1	90	49.807	Dipodomys_ordii
ENSSFOG00015002709	rnaseh1	82	46.203	FBgn0023171	rnh1	93	35.759	Drosophila_melanogaster
ENSSFOG00015002709	rnaseh1	99	46.575	ENSETEG00000012674	RNASEH1	99	46.021	Echinops_telfairi
ENSSFOG00015002709	rnaseh1	89	44.094	ENSEBUG00000006116	rnaseh1	78	45.276	Eptatretus_burgeri
ENSSFOG00015002709	rnaseh1	91	45.791	ENSEBUG00000008898	rnaseh1	99	43.333	Eptatretus_burgeri
ENSSFOG00015002709	rnaseh1	98	49.342	ENSEASG00005022200	RNASEH1	97	49.342	Equus_asinus_asinus
ENSSFOG00015002709	rnaseh1	98	49.342	ENSECAG00000020695	RNASEH1	97	49.342	Equus_caballus
ENSSFOG00015002709	rnaseh1	99	61.093	ENSELUG00000010112	rnaseh1	99	61.889	Esox_lucius
ENSSFOG00015002709	rnaseh1	97	50.526	ENSFCAG00000025832	RNASEH1	98	50.704	Felis_catus
ENSSFOG00015002709	rnaseh1	92	53.597	ENSFALG00000002069	RNASEH1	93	54.286	Ficedula_albicollis
ENSSFOG00015002709	rnaseh1	97	49.281	ENSFDAG00000002035	RNASEH1	87	48.993	Fukomys_damarensis
ENSSFOG00015002709	rnaseh1	99	61.151	ENSGMOG00000013818	rnaseh1	99	60.498	Gadus_morhua
ENSSFOG00015002709	rnaseh1	91	54.770	ENSGALG00000016389	RNASEH1	93	54.417	Gallus_gallus
ENSSFOG00015002709	rnaseh1	99	60.000	ENSGAFG00000001776	rnaseh1	99	60.000	Gambusia_affinis
ENSSFOG00015002709	rnaseh1	99	60.481	ENSGACG00000011935	rnaseh1	98	59.524	Gasterosteus_aculeatus
ENSSFOG00015002709	rnaseh1	94	52.265	ENSGAGG00000009150	RNASEH1	63	52.740	Gopherus_agassizii
ENSSFOG00015002709	rnaseh1	98	51.852	ENSGGOG00000034822	RNASEH1	97	51.852	Gorilla_gorilla
ENSSFOG00015002709	rnaseh1	100	57.860	ENSHBUG00000004666	rnaseh1	96	59.032	Haplochromis_burtoni
ENSSFOG00015002709	rnaseh1	91	50.545	ENSHGLG00000002585	Rnaseh1	83	50.545	Heterocephalus_glaber_female
ENSSFOG00015002709	rnaseh1	91	50.545	ENSHGLG00100005105	Rnaseh1	83	50.545	Heterocephalus_glaber_male
ENSSFOG00015002709	rnaseh1	99	57.994	ENSHCOG00000012329	rnaseh1	98	57.143	Hippocampus_comes
ENSSFOG00015002709	rnaseh1	99	59.286	ENSIPUG00000023060	rnaseh1	98	60.547	Ictalurus_punctatus
ENSSFOG00015002709	rnaseh1	91	52.000	ENSSTOG00000012774	RNASEH1	91	53.906	Ictidomys_tridecemlineatus
ENSSFOG00015002709	rnaseh1	88	47.253	ENSJJAG00000020238	Rnaseh1	94	47.755	Jaculus_jaculus
ENSSFOG00015002709	rnaseh1	89	42.379	ENSJJAG00000008994	-	89	41.700	Jaculus_jaculus
ENSSFOG00015002709	rnaseh1	95	47.015	ENSJJAG00000021481	-	92	45.896	Jaculus_jaculus
ENSSFOG00015002709	rnaseh1	96	60.884	ENSKMAG00000001373	rnaseh1	91	62.921	Kryptolebias_marmoratus
ENSSFOG00015002709	rnaseh1	98	61.511	ENSLBEG00000004480	rnaseh1	98	60.357	Labrus_bergylta
ENSSFOG00015002709	rnaseh1	92	54.643	ENSLACG00000007100	RNASEH1	90	55.000	Latimeria_chalumnae
ENSSFOG00015002709	rnaseh1	93	60.777	ENSLOCG00000017212	rnaseh1	99	61.268	Lepisosteus_oculatus
ENSSFOG00015002709	rnaseh1	98	49.669	ENSLAFG00000015091	RNASEH1	98	49.669	Loxodonta_africana
ENSSFOG00015002709	rnaseh1	89	50.593	ENSMFAG00000002323	-	90	50.000	Macaca_fascicularis
ENSSFOG00015002709	rnaseh1	98	50.000	ENSMFAG00000000063	-	97	50.000	Macaca_fascicularis
ENSSFOG00015002709	rnaseh1	89	49.802	ENSMMUG00000019280	-	90	48.387	Macaca_mulatta
ENSSFOG00015002709	rnaseh1	98	49.667	ENSMNEG00000040183	-	97	49.667	Macaca_nemestrina
ENSSFOG00015002709	rnaseh1	89	50.593	ENSMNEG00000029676	-	90	50.000	Macaca_nemestrina
ENSSFOG00015002709	rnaseh1	89	51.779	ENSMLEG00000028662	-	90	50.391	Mandrillus_leucophaeus
ENSSFOG00015002709	rnaseh1	85	51.550	ENSMLEG00000039352	-	99	51.550	Mandrillus_leucophaeus
ENSSFOG00015002709	rnaseh1	100	59.933	ENSMAMG00000019725	rnaseh1	96	62.319	Mastacembelus_armatus
ENSSFOG00015002709	rnaseh1	100	58.194	ENSMZEG00005013006	rnaseh1	96	59.355	Maylandia_zebra
ENSSFOG00015002709	rnaseh1	82	53.937	ENSMGAG00000013979	RNASEH1	99	54.400	Meleagris_gallopavo
ENSSFOG00015002709	rnaseh1	91	50.534	ENSMAUG00000014957	Rnaseh1	90	50.178	Mesocricetus_auratus
ENSSFOG00015002709	rnaseh1	98	51.163	ENSMICG00000033156	RNASEH1	97	50.890	Microcebus_murinus
ENSSFOG00015002709	rnaseh1	91	50.357	ENSMOCG00000015522	Rnaseh1	90	50.896	Microtus_ochrogaster
ENSSFOG00015002709	rnaseh1	100	59.864	ENSMMOG00000015902	rnaseh1	97	59.932	Mola_mola
ENSSFOG00015002709	rnaseh1	91	53.430	ENSMODG00000014491	-	89	53.430	Monodelphis_domestica
ENSSFOG00015002709	rnaseh1	81	46.531	ENSMODG00000028814	-	91	47.788	Monodelphis_domestica
ENSSFOG00015002709	rnaseh1	100	64.151	ENSMALG00000010565	rnaseh1	97	63.774	Monopterus_albus
ENSSFOG00015002709	rnaseh1	91	51.636	MGP_CAROLIEiJ_G0017660	Rnaseh1	90	51.636	Mus_caroli
ENSSFOG00015002709	rnaseh1	91	51.273	ENSMUSG00000020630	Rnaseh1	90	51.273	Mus_musculus
ENSSFOG00015002709	rnaseh1	91	50.545	MGP_PahariEiJ_G0029418	Rnaseh1	90	51.625	Mus_pahari
ENSSFOG00015002709	rnaseh1	91	51.636	MGP_SPRETEiJ_G0018502	Rnaseh1	90	51.986	Mus_spretus
ENSSFOG00015002709	rnaseh1	67	56.742	ENSMPUG00000012984	RNASEH1	73	65.563	Mustela_putorius_furo
ENSSFOG00015002709	rnaseh1	91	52.364	ENSNGAG00000015966	Rnaseh1	85	52.727	Nannospalax_galili
ENSSFOG00015002709	rnaseh1	100	57.860	ENSNBRG00000008739	rnaseh1	96	59.032	Neolamprologus_brichardi
ENSSFOG00015002709	rnaseh1	91	47.636	ENSNLEG00000015400	RNASEH1	97	46.128	Nomascus_leucogenys
ENSSFOG00015002709	rnaseh1	83	47.826	ENSNLEG00000000059	-	88	47.826	Nomascus_leucogenys
ENSSFOG00015002709	rnaseh1	91	36.559	ENSMEUG00000003610	-	99	34.409	Notamacropus_eugenii
ENSSFOG00015002709	rnaseh1	91	50.000	ENSOPRG00000005072	RNASEH1	90	50.542	Ochotona_princeps
ENSSFOG00015002709	rnaseh1	97	51.264	ENSODEG00000000235	Rnaseh1	94	51.095	Octodon_degus
ENSSFOG00015002709	rnaseh1	93	59.122	ENSONIG00000018697	rnaseh1	99	59.122	Oreochromis_niloticus
ENSSFOG00015002709	rnaseh1	91	50.545	ENSOCUG00000006117	RNASEH1	95	48.814	Oryctolagus_cuniculus
ENSSFOG00015002709	rnaseh1	92	62.454	ENSORLG00000018127	rnaseh1	97	62.082	Oryzias_latipes
ENSSFOG00015002709	rnaseh1	100	60.137	ENSORLG00020013660	rnaseh1	97	59.794	Oryzias_latipes_hni
ENSSFOG00015002709	rnaseh1	100	60.137	ENSORLG00015011338	rnaseh1	97	59.450	Oryzias_latipes_hsok
ENSSFOG00015002709	rnaseh1	90	58.015	ENSOMEG00000004710	rnaseh1	99	57.634	Oryzias_melastigma
ENSSFOG00015002709	rnaseh1	98	50.498	ENSOGAG00000017176	RNASEH1	98	50.498	Otolemur_garnettii
ENSSFOG00015002709	rnaseh1	91	48.276	ENSOARG00000005386	RNASEH1	90	47.586	Ovis_aries
ENSSFOG00015002709	rnaseh1	98	50.842	ENSPPAG00000034221	RNASEH1	97	50.842	Pan_paniscus
ENSSFOG00015002709	rnaseh1	97	50.175	ENSPPRG00000015513	RNASEH1	98	50.352	Panthera_pardus
ENSSFOG00015002709	rnaseh1	85	48.855	ENSPTIG00000019034	RNASEH1	83	51.037	Panthera_tigris_altaica
ENSSFOG00015002709	rnaseh1	84	47.490	ENSPTRG00000043403	-	91	47.490	Pan_troglodytes
ENSSFOG00015002709	rnaseh1	98	50.842	ENSPTRG00000011614	RNASEH1	97	50.842	Pan_troglodytes
ENSSFOG00015002709	rnaseh1	91	47.273	ENSPANG00000018246	-	89	48.047	Papio_anubis
ENSSFOG00015002709	rnaseh1	98	50.505	ENSPANG00000000443	RNASEH1	98	51.737	Papio_anubis
ENSSFOG00015002709	rnaseh1	92	63.929	ENSPKIG00000003146	rnaseh1	99	63.830	Paramormyrops_kingsleyae
ENSSFOG00015002709	rnaseh1	91	51.636	ENSPSIG00000002937	RNASEH1	99	51.636	Pelodiscus_sinensis
ENSSFOG00015002709	rnaseh1	98	60.153	ENSPMGG00000017463	rnaseh1	99	60.153	Periophthalmus_magnuspinnatus
ENSSFOG00015002709	rnaseh1	91	49.117	ENSPEMG00000022465	-	90	50.357	Peromyscus_maniculatus_bairdii
ENSSFOG00015002709	rnaseh1	58	36.364	ENSPCIG00000026047	-	87	37.662	Phascolarctos_cinereus
ENSSFOG00015002709	rnaseh1	91	49.818	ENSPCIG00000023334	-	89	50.196	Phascolarctos_cinereus
ENSSFOG00015002709	rnaseh1	98	59.871	ENSPFOG00000002841	rnaseh1	99	59.355	Poecilia_formosa
ENSSFOG00015002709	rnaseh1	67	54.854	ENSPLAG00000021349	-	91	46.018	Poecilia_latipinna
ENSSFOG00015002709	rnaseh1	98	60.726	ENSPMEG00000016826	rnaseh1	99	60.726	Poecilia_mexicana
ENSSFOG00015002709	rnaseh1	98	59.211	ENSPREG00000012197	rnaseh1	99	59.211	Poecilia_reticulata
ENSSFOG00015002709	rnaseh1	91	46.545	ENSPPYG00000008067	-	98	46.545	Pongo_abelii
ENSSFOG00015002709	rnaseh1	89	45.148	ENSPPYG00000025873	RNASEH1	88	42.754	Pongo_abelii
ENSSFOG00015002709	rnaseh1	98	47.917	ENSPCAG00000002500	RNASEH1	99	48.057	Procavia_capensis
ENSSFOG00015002709	rnaseh1	98	45.847	ENSPCOG00000019444	RNASEH1	98	45.907	Propithecus_coquereli
ENSSFOG00015002709	rnaseh1	98	49.834	ENSPVAG00000002070	RNASEH1	99	50.000	Pteropus_vampyrus
ENSSFOG00015002709	rnaseh1	100	57.860	ENSPNYG00000001292	rnaseh1	96	58.710	Pundamilia_nyererei
ENSSFOG00015002709	rnaseh1	99	64.211	ENSPNAG00000022344	rnaseh1	99	63.399	Pygocentrus_nattereri
ENSSFOG00015002709	rnaseh1	99	48.525	ENSRNOG00000008584	Rnaseh1	98	48.197	Rattus_norvegicus
ENSSFOG00015002709	rnaseh1	98	49.834	ENSRBIG00000034222	RNASEH1	96	49.834	Rhinopithecus_bieti
ENSSFOG00015002709	rnaseh1	98	50.000	ENSRROG00000041761	RNASEH1	96	50.336	Rhinopithecus_roxellana
ENSSFOG00015002709	rnaseh1	91	36.957	YMR234W	-	89	52.000	Saccharomyces_cerevisiae
ENSSFOG00015002709	rnaseh1	91	54.122	ENSSBOG00000025411	RNASEH1	90	54.122	Saimiri_boliviensis_boliviensis
ENSSFOG00015002709	rnaseh1	99	50.538	ENSSHAG00000013051	RNASEH1	96	50.179	Sarcophilus_harrisii
ENSSFOG00015002709	rnaseh1	100	59.661	ENSSMAG00000007586	rnaseh1	97	60.577	Scophthalmus_maximus
ENSSFOG00015002709	rnaseh1	96	60.702	ENSSDUG00000008217	rnaseh1	96	60.364	Seriola_dumerili
ENSSFOG00015002709	rnaseh1	91	55.634	ENSSLDG00000000442	rnaseh1	95	58.566	Seriola_lalandi_dorsalis
ENSSFOG00015002709	rnaseh1	100	48.684	ENSSPUG00000006644	RNASEH1	99	48.684	Sphenodon_punctatus
ENSSFOG00015002709	rnaseh1	100	59.797	ENSSPAG00000009353	rnaseh1	97	59.797	Stegastes_partitus
ENSSFOG00015002709	rnaseh1	91	51.429	ENSSSCG00000025305	RNASEH1	90	51.938	Sus_scrofa
ENSSFOG00015002709	rnaseh1	91	53.237	ENSTGUG00000012980	RNASEH1	93	52.650	Taeniopygia_guttata
ENSSFOG00015002709	rnaseh1	96	60.000	ENSTRUG00000015774	rnaseh1	97	60.440	Takifugu_rubripes
ENSSFOG00015002709	rnaseh1	93	61.972	ENSTNIG00000010715	rnaseh1	97	61.481	Tetraodon_nigroviridis
ENSSFOG00015002709	rnaseh1	91	48.188	ENSTTRG00000001615	RNASEH1	99	47.038	Tursiops_truncatus
ENSSFOG00015002709	rnaseh1	55	65.306	ENSUAMG00000018254	RNASEH1	82	62.500	Ursus_americanus
ENSSFOG00015002709	rnaseh1	70	51.415	ENSUMAG00000003941	RNASEH1	66	50.249	Ursus_maritimus
ENSSFOG00015002709	rnaseh1	98	44.444	ENSVPAG00000011589	RNASEH1	99	44.444	Vicugna_pacos
ENSSFOG00015002709	rnaseh1	98	50.000	ENSVVUG00000008633	RNASEH1	88	50.000	Vulpes_vulpes
ENSSFOG00015002709	rnaseh1	89	44.255	ENSXETG00000030371	-	96	52.980	Xenopus_tropicalis
ENSSFOG00015002709	rnaseh1	99	51.299	ENSXETG00000001212	rnaseh1	100	51.299	Xenopus_tropicalis
ENSSFOG00015002709	rnaseh1	99	59.804	ENSXMAG00000002357	rnaseh1	99	59.804	Xiphophorus_maculatus