EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015002752 (Gene tree)
Gene ID
108919323
Gene Symbol
-
Alias
-
Full Name
polyadenylate-binding protein 1
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
8320 bases
Position
chrKV411269.1:1904511-1912830
Accession
108919323
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015004255PABPPF00658.183.9e-3211
ENSSFOP00015004255RRM_5PF13893.64.5e-0912
ENSSFOP00015004255RRM_5PF13893.64.5e-0922
ENSSFOP00015004255RRM_1PF00076.221.3e-9014
ENSSFOP00015004255RRM_1PF00076.221.3e-9024
ENSSFOP00015004255RRM_1PF00076.221.3e-9034
ENSSFOP00015004255RRM_1PF00076.221.3e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015004323-2892XM_018727243ENSSFOP00015004255633 (aa)XP_018582759A0A1W4XT80
Gene Model
Click here to download ENSSFOG00015002752's gene model file
Pathways
Pathway IDPathway NameSource
sfm03013RNA transportKEGG
sfm03015mRNA surveillance pathwayKEGG
sfm03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015002752's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015002752-5532.323ENSSFOG00015019353celf15734.884
ENSSFOG00015002752-10090.852ENSSFOG00015006662pabpc1a10090.852
ENSSFOG00015002752-5831.847ENSSFOG00015017503-9231.847
ENSSFOG00015002752-9976.948ENSSFOG00015023514pabpc49976.948
ENSSFOG00015002752-5730.204ENSSFOG00015011413tial18330.204
ENSSFOG00015002752-5536.047ENSSFOG00015023817-6136.047
ENSSFOG00015002752-5732.450ENSSFOG00015021786ELAVL19032.450
ENSSFOG00015002752-5439.759ENSSFOG00015010315celf5b7337.234
ENSSFOG00015002752-5930.263ENSSFOG00015023630elavl39130.263
ENSSFOG00015002752-5730.435ENSSFOG00015008776tia17130.435
ENSSFOG00015002752-5937.349ENSSFOG00015018252elavl28537.349
ENSSFOG00015002752-6237.349ENSSFOG00015010874celf47137.349
ENSSFOG00015002752-9875.119ENSSFOG00015017304pabpc1l9974.802
ENSSFOG00015002752-5739.759ENSSFOG00015004376celf5a7439.759
ENSSFOG00015002752-5831.034ENSSFOG00015008583ncl5431.034
ENSSFOG00015002752-5936.145ENSSFOG00015015838elavl48736.145
ENSSFOG00015002752-5930.065ENSSFOG00015014493rbms1a5830.065
ENSSFOG00015002752-7031.183ENSSFOG00015018496-8931.183
ENSSFOG00015002752-9884.751ENSSFOG00015006617-10084.069
ENSSFOG00015002752-6979.769ENSSFOG00015019668-8879.769
ENSSFOG00015002752-5937.349ENSSFOG00015001257ELAVL29937.349
ENSSFOG00015002752-5933.684ENSSFOG00015006642-7233.684
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015002752-5880.102ENSG00000184388PABPC1L2B9880.102Homo_sapiens
ENSSFOG00015002752-5880.102ENSG00000186288PABPC1L2A9880.102Homo_sapiens
ENSSFOG00015002752-10090.581ENSAPOG00000015105pabpc1a10090.424Acanthochromis_polyacanthus
ENSSFOG00015002752-10095.268ENSAPOG00000017776pabpc1b10095.268Acanthochromis_polyacanthus
ENSSFOG00015002752-5880.102ENSAMEG00000019441-9880.102Ailuropoda_melanoleuca
ENSSFOG00015002752-10090.079ENSACIG00000018366pabpc1b10090.079Amphilophus_citrinellus
ENSSFOG00015002752-10090.581ENSACIG00000004685pabpc1a10090.581Amphilophus_citrinellus
ENSSFOG00015002752-10094.953ENSAOCG00000019839pabpc1b10094.953Amphiprion_ocellaris
ENSSFOG00015002752-10090.110ENSAOCG00000011656pabpc1a10090.267Amphiprion_ocellaris
ENSSFOG00015002752-10094.953ENSAPEG00000010435pabpc1b10094.953Amphiprion_percula
ENSSFOG00015002752-10090.110ENSAPEG00000006963pabpc1a10090.267Amphiprion_percula
ENSSFOG00015002752-10090.424ENSATEG00000024852pabpc1a10090.738Anabas_testudineus
ENSSFOG00015002752-10094.488ENSATEG00000012917pabpc1b10094.488Anabas_testudineus
ENSSFOG00015002752-5880.102ENSANAG00000019429-9880.102Aotus_nancymaae
ENSSFOG00015002752-5880.102ENSANAG00000019431-9880.102Aotus_nancymaae
ENSSFOG00015002752-10094.322ENSACLG00000014335pabpc1b10094.322Astatotilapia_calliptera
ENSSFOG00015002752-9994.712ENSACLG00000009399pabpc1a10094.712Astatotilapia_calliptera
ENSSFOG00015002752-10096.057ENSAMXG00000008599pabpc1b10096.057Astyanax_mexicanus
ENSSFOG00015002752-5977.033ENSBTAG00000052491-9877.033Bos_taurus
ENSSFOG00015002752-5979.024ENSBTAG00000050902-9879.024Bos_taurus
ENSSFOG00015002752-5880.102ENSCJAG00000041326-9880.102Callithrix_jacchus
ENSSFOG00015002752-5979.024ENSCAFG00020002052-9879.024Canis_lupus_dingo
ENSSFOG00015002752-5880.102ENSCHIG00000011138-9880.102Capra_hircus
ENSSFOG00015002752-5880.102ENSCHIG00000006283-9880.102Capra_hircus
ENSSFOG00015002752-5880.102ENSTSYG00000001775-9880.102Carlito_syrichta
ENSSFOG00015002752-5880.102ENSCPOG00000009525-9880.102Cavia_porcellus
ENSSFOG00015002752-5880.102ENSCCAG00000031524-9880.102Cebus_capucinus
ENSSFOG00015002752-5880.102ENSCATG00000042826-9880.102Cercocebus_atys
ENSSFOG00015002752-5880.102ENSCATG00000043125-9880.102Cercocebus_atys
ENSSFOG00015002752-5878.061ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSSFOG00015002752-5878.061ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSSFOG00015002752-5880.102ENSCSAG00000000102-9880.102Chlorocebus_sabaeus
ENSSFOG00015002752-5880.110ENSCGRG00001023387-9677.835Cricetulus_griseus_chok1gshd
ENSSFOG00015002752-10090.694ENSCSEG00000015241-10090.694Cynoglossus_semilaevis
ENSSFOG00015002752-9990.461ENSCSEG00000013324pabpc1a9990.620Cynoglossus_semilaevis
ENSSFOG00015002752-10091.969ENSCVAG00000005489pabpc1b10091.969Cyprinodon_variegatus
ENSSFOG00015002752-10090.110ENSCVAG00000021872pabpc1a10089.953Cyprinodon_variegatus
ENSSFOG00015002752-10091.969ENSDARG00000017219pabpc1a10091.969Danio_rerio
ENSSFOG00015002752-10094.479ENSDARG00000021140pabpc1b10095.110Danio_rerio
ENSSFOG00015002752-5880.423ENSDNOG00000030926-9878.571Dasypus_novemcinctus
ENSSFOG00015002752-5877.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSSFOG00015002752-5978.641ENSEASG00005010399-9878.641Equus_asinus_asinus
ENSSFOG00015002752-5978.641ENSECAG00000002620-9878.641Equus_caballus
ENSSFOG00015002752-5975.510ENSEEUG00000008203-9875.510Erinaceus_europaeus
ENSSFOG00015002752-9991.339ENSELUG00000003614pabpc1a10091.181Esox_lucius
ENSSFOG00015002752-5959.052ENSELUG00000005389-9759.052Esox_lucius
ENSSFOG00015002752-10091.824ENSELUG00000015062-10091.824Esox_lucius
ENSSFOG00015002752-5880.102ENSFCAG00000039701-9880.102Felis_catus
ENSSFOG00015002752-5880.102ENSFDAG00000005484-9880.102Fukomys_damarensis
ENSSFOG00015002752-10089.953ENSFHEG00000018979pabpc1a10090.110Fundulus_heteroclitus
ENSSFOG00015002752-10092.114ENSFHEG00000008186pabpc1b10092.114Fundulus_heteroclitus
ENSSFOG00015002752-10084.112ENSGMOG00000002448-10084.112Gadus_morhua
ENSSFOG00015002752-9988.682ENSGMOG00000013448pabpc1a10088.545Gadus_morhua
ENSSFOG00015002752-10089.639ENSGAFG00000019750pabpc1a10089.953Gambusia_affinis
ENSSFOG00015002752-10093.533ENSGAFG00000010193pabpc1b10093.533Gambusia_affinis
ENSSFOG00015002752-10090.810ENSGACG00000003771pabpc1b10091.121Gasterosteus_aculeatus
ENSSFOG00015002752-10090.267ENSGACG00000003572pabpc1a10090.267Gasterosteus_aculeatus
ENSSFOG00015002752-5880.102ENSGGOG00000038606-9880.102Gorilla_gorilla
ENSSFOG00015002752-5880.102ENSGGOG00000043933-9880.102Gorilla_gorilla
ENSSFOG00015002752-10094.322ENSHBUG00000002075pabpc1b10094.322Haplochromis_burtoni
ENSSFOG00015002752-9994.712ENSHBUG00000020487pabpc1a10094.712Haplochromis_burtoni
ENSSFOG00015002752-5879.082ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSSFOG00015002752-5879.082ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSSFOG00015002752-5879.082ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSSFOG00015002752-9871.014ENSHCOG00000003175pabpc1b9970.900Hippocampus_comes
ENSSFOG00015002752-10089.796ENSHCOG00000013502pabpc1a10089.953Hippocampus_comes
ENSSFOG00015002752-8158.209ENSIPUG00000018724-7858.209Ictalurus_punctatus
ENSSFOG00015002752-10087.855ENSIPUG00000010791-10088.013Ictalurus_punctatus
ENSSFOG00015002752-10090.063ENSIPUG00000008848pabpc1a10090.063Ictalurus_punctatus
ENSSFOG00015002752-7455.439ENSIPUG00000021244-6654.918Ictalurus_punctatus
ENSSFOG00015002752-5879.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSSFOG00015002752-5879.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSSFOG00015002752-5878.571ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSSFOG00015002752-10091.798ENSKMAG00000008049pabpc1b10092.114Kryptolebias_marmoratus
ENSSFOG00015002752-10090.267ENSKMAG00000000605pabpc1a10089.953Kryptolebias_marmoratus
ENSSFOG00015002752-10090.267ENSLBEG00000024002-10090.267Labrus_bergylta
ENSSFOG00015002752-10094.006ENSLBEG00000026845pabpc1b10094.006Labrus_bergylta
ENSSFOG00015002752-5879.487ENSLAFG00000023096-9879.487Loxodonta_africana
ENSSFOG00015002752-5879.695ENSMFAG00000028878-9879.695Macaca_fascicularis
ENSSFOG00015002752-5880.102ENSMMUG00000009740-9880.102Macaca_mulatta
ENSSFOG00015002752-5880.102ENSMMUG00000037681-9880.102Macaca_mulatta
ENSSFOG00015002752-5880.102ENSMMUG00000039929-9880.102Macaca_mulatta
ENSSFOG00015002752-5880.102ENSMNEG00000037732-9880.102Macaca_nemestrina
ENSSFOG00015002752-5880.102ENSMLEG00000027495-9880.102Mandrillus_leucophaeus
ENSSFOG00015002752-10095.110ENSMAMG00000014610pabpc1b10095.110Mastacembelus_armatus
ENSSFOG00015002752-9993.750ENSMAMG00000004502-10093.750Mastacembelus_armatus
ENSSFOG00015002752-9994.712ENSMZEG00005025416pabpc1a10094.712Maylandia_zebra
ENSSFOG00015002752-10094.322ENSMZEG00005026745pabpc1b10094.322Maylandia_zebra
ENSSFOG00015002752-5880.102ENSMICG00000047642-9880.102Microcebus_murinus
ENSSFOG00015002752-10087.697ENSMMOG00000018009pabpc1b10087.855Mola_mola
ENSSFOG00015002752-9993.269ENSMMOG00000018044pabpc1a10093.269Mola_mola
ENSSFOG00015002752-9874.045ENSMODG00000013156-9874.482Monodelphis_domestica
ENSSFOG00015002752-9967.512ENSMODG00000015024-9967.512Monodelphis_domestica
ENSSFOG00015002752-10086.909ENSMALG00000006066pabpc1b10088.801Monopterus_albus
ENSSFOG00015002752-10090.110ENSMALG00000013020-10090.581Monopterus_albus
ENSSFOG00015002752-5881.967ENSNGAG00000012688-9878.571Nannospalax_galili
ENSSFOG00015002752-10094.322ENSNBRG00000013737pabpc1b10094.322Neolamprologus_brichardi
ENSSFOG00015002752-9994.712ENSNBRG00000003068-10094.712Neolamprologus_brichardi
ENSSFOG00015002752-5880.102ENSNLEG00000018128-9880.102Nomascus_leucogenys
ENSSFOG00015002752-5879.592ENSODEG00000018540-9879.592Octodon_degus
ENSSFOG00015002752-10089.953ENSONIG00000006871-10089.953Oreochromis_niloticus
ENSSFOG00015002752-10094.322ENSONIG00000002717pabpc1b10094.322Oreochromis_niloticus
ENSSFOG00015002752-5880.102ENSOCUG00000002565-9880.102Oryctolagus_cuniculus
ENSSFOG00015002752-9994.048ENSORLG00000002691pabpc1a10094.048Oryzias_latipes
ENSSFOG00015002752-10086.435ENSORLG00000003008-10086.435Oryzias_latipes
ENSSFOG00015002752-10086.435ENSORLG00020022259-10086.435Oryzias_latipes_hni
ENSSFOG00015002752-10089.011ENSORLG00020022398pabpc1a10089.168Oryzias_latipes_hni
ENSSFOG00015002752-10088.854ENSORLG00015013633pabpc110089.011Oryzias_latipes_hsok
ENSSFOG00015002752-10086.751ENSORLG00015010932-10086.751Oryzias_latipes_hsok
ENSSFOG00015002752-9983.524ENSOMEG00000013627pabpc1b10083.524Oryzias_melastigma
ENSSFOG00015002752-10089.482ENSOMEG00000020219pabpc1a10089.796Oryzias_melastigma
ENSSFOG00015002752-5880.102ENSOGAG00000029513-9880.102Otolemur_garnettii
ENSSFOG00015002752-5880.102ENSOGAG00000026047-9880.102Otolemur_garnettii
ENSSFOG00015002752-5880.102ENSOARG00000005943-9880.102Ovis_aries
ENSSFOG00015002752-5880.102ENSPPAG00000012920-9880.102Pan_paniscus
ENSSFOG00015002752-5880.102ENSPPRG00000011809-9880.102Panthera_pardus
ENSSFOG00015002752-5880.102ENSPPRG00000011804-9880.102Panthera_pardus
ENSSFOG00015002752-5880.102ENSPTRG00000028252-9880.102Pan_troglodytes
ENSSFOG00015002752-5880.102ENSPANG00000011549-9880.102Papio_anubis
ENSSFOG00015002752-10095.584ENSPKIG00000005676pabpc1b10095.426Paramormyrops_kingsleyae
ENSSFOG00015002752-7092.601ENSPMGG00000023134-9792.601Periophthalmus_magnuspinnatus
ENSSFOG00015002752-7093.483ENSPMGG00000022487pabpc1a9293.483Periophthalmus_magnuspinnatus
ENSSFOG00015002752-9971.451ENSPCIG00000016995-5571.451Phascolarctos_cinereus
ENSSFOG00015002752-10088.598ENSPFOG00000010815pabpc1a10088.906Poecilia_formosa
ENSSFOG00015002752-10092.902ENSPFOG00000005917pabpc1b10092.902Poecilia_formosa
ENSSFOG00015002752-10093.218ENSPLAG00000001388pabpc1b10093.218Poecilia_latipinna
ENSSFOG00015002752-10090.110ENSPLAG00000004114pabpc1a10090.424Poecilia_latipinna
ENSSFOG00015002752-10092.902ENSPMEG00000014399pabpc1b10092.902Poecilia_mexicana
ENSSFOG00015002752-10090.110ENSPMEG00000001334pabpc1a10090.424Poecilia_mexicana
ENSSFOG00015002752-10093.218ENSPREG00000010911pabpc1b10093.218Poecilia_reticulata
ENSSFOG00015002752-9994.231ENSPREG00000019595pabpc1a10094.231Poecilia_reticulata
ENSSFOG00015002752-5880.102ENSPPYG00000020468-9880.102Pongo_abelii
ENSSFOG00015002752-5980.102ENSPCAG00000005308-9880.102Procavia_capensis
ENSSFOG00015002752-5879.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSSFOG00015002752-5980.513ENSPVAG00000016117-9880.513Pteropus_vampyrus
ENSSFOG00015002752-10090.424ENSPNYG00000005192pabpc1a10090.424Pundamilia_nyererei
ENSSFOG00015002752-10094.322ENSPNYG00000012578pabpc1b10094.322Pundamilia_nyererei
ENSSFOG00015002752-10091.969ENSPNAG00000028408pabpc1a10091.811Pygocentrus_nattereri
ENSSFOG00015002752-10094.953ENSPNAG00000024626pabpc1b10094.953Pygocentrus_nattereri
ENSSFOG00015002752-5880.102ENSRBIG00000027173-9880.102Rhinopithecus_bieti
ENSSFOG00015002752-9989.953ENSRBIG00000028738-9589.953Rhinopithecus_bieti
ENSSFOG00015002752-5880.102ENSRROG00000017404-9880.102Rhinopithecus_roxellana
ENSSFOG00015002752-9864.895ENSSHAG00000000511-10064.895Sarcophilus_harrisii
ENSSFOG00015002752-10093.375ENSSMAG00000006869pabpc1b10093.375Scophthalmus_maximus
ENSSFOG00015002752-10089.953ENSSMAG00000010803pabpc1a10089.953Scophthalmus_maximus
ENSSFOG00015002752-10093.218ENSSDUG00000011965pabpc1b10093.218Seriola_dumerili
ENSSFOG00015002752-10091.052ENSSDUG00000006675pabpc1a10091.209Seriola_dumerili
ENSSFOG00015002752-10094.836ENSSLDG00000014156pabpc1b10094.836Seriola_lalandi_dorsalis
ENSSFOG00015002752-10091.052ENSSLDG00000011661pabpc1a10091.209Seriola_lalandi_dorsalis
ENSSFOG00015002752-10095.426ENSSPAG00000019265pabpc1b10095.426Stegastes_partitus
ENSSFOG00015002752-10090.110ENSSPAG00000014453-10090.267Stegastes_partitus
ENSSFOG00015002752-5880.102ENSSSCG00000032167-9880.102Sus_scrofa
ENSSFOG00015002752-5880.102ENSSSCG00000036336-9880.102Sus_scrofa
ENSSFOG00015002752-10089.325ENSTRUG00000011577-10089.325Takifugu_rubripes
ENSSFOG00015002752-10089.449ENSTRUG00000003767-10089.606Takifugu_rubripes
ENSSFOG00015002752-10086.687ENSTNIG00000013307pabpc1a10086.687Tetraodon_nigroviridis
ENSSFOG00015002752-10089.812ENSTNIG00000009153pabpc1b10089.812Tetraodon_nigroviridis
ENSSFOG00015002752-5880.102ENSTTRG00000013181-9880.102Tursiops_truncatus
ENSSFOG00015002752-5880.102ENSUAMG00000008089-9880.102Ursus_americanus
ENSSFOG00015002752-9753.659ENSUMAG00000023926-8967.680Ursus_maritimus
ENSSFOG00015002752-5880.102ENSUMAG00000003364-9880.102Ursus_maritimus
ENSSFOG00015002752-5979.000ENSVVUG00000015892-9779.000Vulpes_vulpes
ENSSFOG00015002752-9945.843ENSXETG00000015439-10045.618Xenopus_tropicalis
ENSSFOG00015002752-10088.959ENSXCOG00000019901pabpc1b10088.959Xiphophorus_couchianus
ENSSFOG00015002752-10087.046ENSXCOG00000017066pabpc1a10086.888Xiphophorus_couchianus
ENSSFOG00015002752-10090.110ENSXMAG00000002555pabpc1a10090.424Xiphophorus_maculatus
ENSSFOG00015002752-10093.691ENSXMAG00000003753pabpc1b10093.691Xiphophorus_maculatus

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