EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015003008 (Gene tree)
Gene ID: 108920582
Gene Symbol: msl3
Alias: MSL3L1
Full Name: MSL complex subunit 3
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 17431 bases
Position: chrKV411293.1:4672-22102
Accession: 108920582
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015004636	Tudor-knot	PF11717.8	1e-07	1	1
ENSSFOP00015004656	Tudor-knot	PF11717.8	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015004730	-	1509	-	ENSSFOP00015004656	502 (aa)	-	-
ENSSFOT00015004710	-	5057	XM_018729450	ENSSFOP00015004636	522 (aa)	XP_018584966	A0A1W4Y9K2

Gene Model

Click here to download ENSSFOG00015003008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003008's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015003008	msl3	97	59.960	ENSSFOG00015004855	MSL3	92	59.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003008	msl3	99	70.802	ENSG00000005302	MSL3	97	83.740	Homo_sapiens
ENSSFOG00015003008	msl3	99	68.431	ENSAPOG00000022282	MSL3	99	68.868	Acanthochromis_polyacanthus
ENSSFOG00015003008	msl3	94	69.495	ENSAMEG00000010145	MSL3	96	69.697	Ailuropoda_melanoleuca
ENSSFOG00015003008	msl3	99	66.286	ENSACIG00000019703	MSL3	99	67.625	Amphilophus_citrinellus
ENSSFOG00015003008	msl3	99	67.850	ENSAOCG00000001997	MSL3	99	68.603	Amphiprion_ocellaris
ENSSFOG00015003008	msl3	99	67.455	ENSAPEG00000013147	MSL3	99	68.603	Amphiprion_percula
ENSSFOG00015003008	msl3	99	68.130	ENSATEG00000002120	MSL3	99	68.762	Anabas_testudineus
ENSSFOG00015003008	msl3	99	71.157	ENSAPLG00000009050	MSL3	99	71.347	Anas_platyrhynchos
ENSSFOG00015003008	msl3	99	73.624	ENSACAG00000001416	MSL3	99	72.865	Anolis_carolinensis
ENSSFOG00015003008	msl3	99	70.992	ENSANAG00000020352	MSL3	99	71.374	Aotus_nancymaae
ENSSFOG00015003008	msl3	69	34.615	ENSANAG00000024857	-	90	39.683	Aotus_nancymaae
ENSSFOG00015003008	msl3	99	67.818	ENSACLG00000027641	MSL3	99	68.966	Astatotilapia_calliptera
ENSSFOG00015003008	msl3	100	74.521	ENSAMXG00000007892	MSL3	100	76.527	Astyanax_mexicanus
ENSSFOG00015003008	msl3	99	69.847	ENSBTAG00000009278	MSL3	99	69.656	Bos_taurus
ENSSFOG00015003008	msl3	99	70.802	ENSCJAG00000001061	MSL3	87	71.183	Callithrix_jacchus
ENSSFOG00015003008	msl3	99	70.420	ENSCAFG00000011611	MSL3	99	71.183	Canis_familiaris
ENSSFOG00015003008	msl3	99	70.420	ENSCAFG00020002360	MSL3	99	71.183	Canis_lupus_dingo
ENSSFOG00015003008	msl3	99	69.656	ENSCHIG00000008619	-	99	69.466	Capra_hircus
ENSSFOG00015003008	msl3	94	70.505	ENSTSYG00000012788	MSL3	96	69.899	Carlito_syrichta
ENSSFOG00015003008	msl3	99	70.095	ENSCPOG00000004692	MSL3	99	69.450	Cavia_porcellus
ENSSFOG00015003008	msl3	99	70.611	ENSCCAG00000035792	MSL3	99	70.992	Cebus_capucinus
ENSSFOG00015003008	msl3	99	70.930	ENSCATG00000044726	MSL3	99	71.374	Cercocebus_atys
ENSSFOG00015003008	msl3	99	70.968	ENSCLAG00000000102	-	99	69.829	Chinchilla_lanigera
ENSSFOG00015003008	msl3	99	70.543	ENSCSAG00000015196	MSL3	99	70.992	Chlorocebus_sabaeus
ENSSFOG00015003008	msl3	99	75.095	ENSCPBG00000024070	MSL3	99	75.285	Chrysemys_picta_bellii
ENSSFOG00015003008	msl3	95	38.532	ENSCSAVG00000009022	-	81	38.390	Ciona_savignyi
ENSSFOG00015003008	msl3	94	69.636	ENSCANG00000033891	MSL3	99	70.385	Colobus_angolensis_palliatus
ENSSFOG00015003008	msl3	99	67.176	ENSCGRG00001024399	Msl3	99	67.176	Cricetulus_griseus_chok1gshd
ENSSFOG00015003008	msl3	99	67.176	ENSCGRG00000011031	Msl3	99	67.176	Cricetulus_griseus_crigri
ENSSFOG00015003008	msl3	99	67.530	ENSCVAG00000012611	MSL3	99	67.729	Cyprinodon_variegatus
ENSSFOG00015003008	msl3	99	69.466	ENSDORG00000003438	Msl3	99	69.466	Dipodomys_ordii
ENSSFOG00015003008	msl3	75	78.261	ENSETEG00000016654	MSL3	85	78.261	Echinops_telfairi
ENSSFOG00015003008	msl3	99	54.664	ENSEBUG00000000515	MSL3	99	54.766	Eptatretus_burgeri
ENSSFOG00015003008	msl3	90	76.336	ENSEASG00005020884	MSL3	99	76.336	Equus_asinus_asinus
ENSSFOG00015003008	msl3	99	70.038	ENSECAG00000016699	MSL3	99	70.802	Equus_caballus
ENSSFOG00015003008	msl3	93	63.374	ENSEEUG00000014074	MSL3	99	64.097	Erinaceus_europaeus
ENSSFOG00015003008	msl3	73	32.039	ENSELUG00000021372	-	73	30.325	Esox_lucius
ENSSFOG00015003008	msl3	100	82.202	ENSELUG00000021078	MSL3	100	82.752	Esox_lucius
ENSSFOG00015003008	msl3	99	70.611	ENSFCAG00000002794	MSL3	99	70.802	Felis_catus
ENSSFOG00015003008	msl3	99	64.072	ENSFHEG00000019357	MSL3	99	64.072	Fundulus_heteroclitus
ENSSFOG00015003008	msl3	99	61.091	ENSGMOG00000015932	MSL3	99	61.273	Gadus_morhua
ENSSFOG00015003008	msl3	99	74.905	ENSGALG00000041433	MSL3	99	74.905	Gallus_gallus
ENSSFOG00015003008	msl3	99	68.073	ENSGACG00000015038	MSL3	99	68.864	Gasterosteus_aculeatus
ENSSFOG00015003008	msl3	99	75.095	ENSGAGG00000021072	MSL3	100	75.152	Gopherus_agassizii
ENSSFOG00015003008	msl3	99	70.611	ENSGGOG00000006582	MSL3	99	71.183	Gorilla_gorilla
ENSSFOG00015003008	msl3	99	67.636	ENSHBUG00000008665	MSL3	99	68.784	Haplochromis_burtoni
ENSSFOG00015003008	msl3	99	69.656	ENSHGLG00000000202	MSL3	99	70.038	Heterocephalus_glaber_female
ENSSFOG00015003008	msl3	94	68.219	ENSHGLG00100016633	-	96	68.623	Heterocephalus_glaber_male
ENSSFOG00015003008	msl3	99	64.845	ENSHCOG00000013930	MSL3	99	65.455	Hippocampus_comes
ENSSFOG00015003008	msl3	100	79.266	ENSIPUG00000012531	msl3	100	79.048	Ictalurus_punctatus
ENSSFOG00015003008	msl3	59	39.726	ENSSTOG00000022094	-	69	31.004	Ictidomys_tridecemlineatus
ENSSFOG00015003008	msl3	99	71.183	ENSSTOG00000006229	MSL3	99	71.374	Ictidomys_tridecemlineatus
ENSSFOG00015003008	msl3	99	68.702	ENSJJAG00000007793	-	99	68.893	Jaculus_jaculus
ENSSFOG00015003008	msl3	99	86.148	ENSLOCG00000009931	MSL3	99	85.199	Lepisosteus_oculatus
ENSSFOG00015003008	msl3	99	70.930	ENSMFAG00000031868	MSL3	99	71.374	Macaca_fascicularis
ENSSFOG00015003008	msl3	99	70.930	ENSMMUG00000002689	MSL3	99	71.374	Macaca_mulatta
ENSSFOG00015003008	msl3	99	70.930	ENSMNEG00000045099	MSL3	99	71.374	Macaca_nemestrina
ENSSFOG00015003008	msl3	95	69.339	ENSMLEG00000038094	MSL3	99	70.385	Mandrillus_leucophaeus
ENSSFOG00015003008	msl3	99	66.727	ENSMAMG00000004151	MSL3	99	68.058	Mastacembelus_armatus
ENSSFOG00015003008	msl3	99	67.818	ENSMZEG00005004848	MSL3	99	68.966	Maylandia_zebra
ENSSFOG00015003008	msl3	99	74.905	ENSMGAG00000014710	MSL3	99	74.905	Meleagris_gallopavo
ENSSFOG00015003008	msl3	99	68.321	ENSMAUG00000013952	Msl3	99	68.138	Mesocricetus_auratus
ENSSFOG00015003008	msl3	99	70.038	ENSMICG00000014399	MSL3	99	70.802	Microcebus_murinus
ENSSFOG00015003008	msl3	99	67.304	ENSMOCG00000000342	Msl3	99	67.304	Microtus_ochrogaster
ENSSFOG00015003008	msl3	99	67.675	ENSMMOG00000007050	MSL3	99	68.302	Mola_mola
ENSSFOG00015003008	msl3	68	44.615	ENSMODG00000002580	-	95	44.262	Monodelphis_domestica
ENSSFOG00015003008	msl3	99	74.713	ENSMODG00000017350	MSL3	99	74.521	Monodelphis_domestica
ENSSFOG00015003008	msl3	99	66.000	ENSMALG00000010272	MSL3	99	67.514	Monopterus_albus
ENSSFOG00015003008	msl3	99	67.370	MGP_CAROLIEiJ_G0033581	Msl3	99	67.179	Mus_caroli
ENSSFOG00015003008	msl3	99	67.370	ENSMUSG00000031358	Msl3	99	67.179	Mus_musculus
ENSSFOG00015003008	msl3	99	67.562	MGP_PahariEiJ_G0032120	Msl3	99	67.370	Mus_pahari
ENSSFOG00015003008	msl3	99	67.370	MGP_SPRETEiJ_G0034750	Msl3	99	67.179	Mus_spretus
ENSSFOG00015003008	msl3	99	70.270	ENSMPUG00000002545	MSL3	99	71.183	Mustela_putorius_furo
ENSSFOG00015003008	msl3	94	68.410	ENSMLUG00000003852	MSL3	99	68.209	Myotis_lucifugus
ENSSFOG00015003008	msl3	99	68.702	ENSNGAG00000005152	-	99	68.702	Nannospalax_galili
ENSSFOG00015003008	msl3	99	67.658	ENSNBRG00000013071	MSL3	99	68.089	Neolamprologus_brichardi
ENSSFOG00015003008	msl3	99	70.611	ENSNLEG00000009057	MSL3	99	71.183	Nomascus_leucogenys
ENSSFOG00015003008	msl3	72	34.694	ENSODEG00000014935	-	95	32.653	Octodon_degus
ENSSFOG00015003008	msl3	99	70.833	ENSODEG00000005888	-	99	70.833	Octodon_degus
ENSSFOG00015003008	msl3	99	67.343	ENSONIG00000012104	MSL3	99	69.245	Oreochromis_niloticus
ENSSFOG00015003008	msl3	99	66.908	ENSORLG00000004698	MSL3	99	68.051	Oryzias_latipes
ENSSFOG00015003008	msl3	99	68.127	ENSORLG00020018280	MSL3	99	68.127	Oryzias_latipes_hni
ENSSFOG00015003008	msl3	99	66.727	ENSORLG00015016230	MSL3	99	67.870	Oryzias_latipes_hsok
ENSSFOG00015003008	msl3	99	67.329	ENSOMEG00000005256	MSL3	99	67.387	Oryzias_melastigma
ENSSFOG00015003008	msl3	99	69.714	ENSOGAG00000005030	MSL3	99	70.286	Otolemur_garnettii
ENSSFOG00015003008	msl3	93	68.357	ENSOARG00000011011	MSL3	100	68.154	Ovis_aries
ENSSFOG00015003008	msl3	99	69.923	ENSPPAG00000039607	MSL3	99	70.498	Pan_paniscus
ENSSFOG00015003008	msl3	99	70.802	ENSPPRG00000024561	MSL3	99	70.992	Panthera_pardus
ENSSFOG00015003008	msl3	97	65.226	ENSPTIG00000017508	MSL3	99	65.422	Panthera_tigris_altaica
ENSSFOG00015003008	msl3	99	70.802	ENSPTRG00000021662	MSL3	99	71.374	Pan_troglodytes
ENSSFOG00015003008	msl3	100	85.769	ENSPKIG00000011664	MSL3	100	85.009	Paramormyrops_kingsleyae
ENSSFOG00015003008	msl3	94	75.709	ENSPSIG00000007595	MSL3	99	75.709	Pelodiscus_sinensis
ENSSFOG00015003008	msl3	99	67.717	ENSPMGG00000015421	MSL3	99	68.110	Periophthalmus_magnuspinnatus
ENSSFOG00015003008	msl3	99	69.084	ENSPEMG00000011959	Msl3	99	69.084	Peromyscus_maniculatus_bairdii
ENSSFOG00015003008	msl3	99	75.287	ENSPCIG00000005877	-	74	74.904	Phascolarctos_cinereus
ENSSFOG00015003008	msl3	99	68.354	ENSPFOG00000016323	MSL3	99	68.412	Poecilia_formosa
ENSSFOG00015003008	msl3	99	68.354	ENSPLAG00000016544	MSL3	99	68.412	Poecilia_latipinna
ENSSFOG00015003008	msl3	99	68.354	ENSPMEG00000007675	MSL3	99	68.412	Poecilia_mexicana
ENSSFOG00015003008	msl3	99	68.354	ENSPREG00000009008	MSL3	99	68.412	Poecilia_reticulata
ENSSFOG00015003008	msl3	99	70.611	ENSPPYG00000020123	MSL3	99	71.183	Pongo_abelii
ENSSFOG00015003008	msl3	77	78.261	ENSPCAG00000005332	MSL3	87	78.261	Procavia_capensis
ENSSFOG00015003008	msl3	99	70.229	ENSPCOG00000010079	-	99	70.992	Propithecus_coquereli
ENSSFOG00015003008	msl3	98	66.408	ENSPCOG00000023177	-	90	66.990	Propithecus_coquereli
ENSSFOG00015003008	msl3	93	68.560	ENSPVAG00000005000	MSL3	99	69.168	Pteropus_vampyrus
ENSSFOG00015003008	msl3	99	67.818	ENSPNYG00000021904	MSL3	99	68.966	Pundamilia_nyererei
ENSSFOG00015003008	msl3	100	78.302	ENSPNAG00000016028	MSL3	100	78.727	Pygocentrus_nattereri
ENSSFOG00015003008	msl3	99	70.667	ENSRROG00000032523	MSL3	99	71.238	Rhinopithecus_roxellana
ENSSFOG00015003008	msl3	99	70.992	ENSSBOG00000007759	MSL3	99	71.374	Saimiri_boliviensis_boliviensis
ENSSFOG00015003008	msl3	69	43.548	ENSSHAG00000010828	-	94	43.103	Sarcophilus_harrisii
ENSSFOG00015003008	msl3	95	72.421	ENSSHAG00000013243	MSL3	91	72.222	Sarcophilus_harrisii
ENSSFOG00015003008	msl3	99	65.580	ENSSMAG00000003592	MSL3	99	66.727	Scophthalmus_maximus
ENSSFOG00015003008	msl3	99	67.636	ENSSLDG00000012737	MSL3	99	68.966	Seriola_lalandi_dorsalis
ENSSFOG00015003008	msl3	75	73.990	ENSSPUG00000003224	-	99	73.990	Sphenodon_punctatus
ENSSFOG00015003008	msl3	99	66.254	ENSSPAG00000007335	MSL3	100	67.308	Stegastes_partitus
ENSSFOG00015003008	msl3	99	70.420	ENSSSCG00000012114	MSL3	99	70.802	Sus_scrofa
ENSSFOG00015003008	msl3	94	74.089	ENSTGUG00000008286	MSL3	99	74.089	Taeniopygia_guttata
ENSSFOG00015003008	msl3	99	66.545	ENSTRUG00000012620	MSL3	99	67.695	Takifugu_rubripes
ENSSFOG00015003008	msl3	99	67.283	ENSTNIG00000014548	MSL3	99	67.897	Tetraodon_nigroviridis
ENSSFOG00015003008	msl3	99	64.885	ENSTBEG00000013679	MSL3	99	65.649	Tupaia_belangeri
ENSSFOG00015003008	msl3	99	64.808	ENSTTRG00000008682	MSL3	99	64.808	Tursiops_truncatus
ENSSFOG00015003008	msl3	53	68.345	ENSUAMG00000001084	MSL3	61	68.705	Ursus_americanus
ENSSFOG00015003008	msl3	95	69.339	ENSUMAG00000005111	MSL3	97	69.539	Ursus_maritimus
ENSSFOG00015003008	msl3	93	66.872	ENSVPAG00000008564	MSL3	99	66.872	Vicugna_pacos
ENSSFOG00015003008	msl3	70	65.854	ENSVVUG00000019141	MSL3	66	66.938	Vulpes_vulpes
ENSSFOG00015003008	msl3	99	67.362	ENSXCOG00000017534	MSL3	99	67.992	Xiphophorus_couchianus
ENSSFOG00015003008	msl3	99	68.174	ENSXMAG00000009066	MSL3	99	68.231	Xiphophorus_maculatus