EuRBPDB

Description

Ensembl ID: ENSSFOG00015003048 (Gene tree)
Gene ID: -
Gene Symbol: ppargc1b
Alias: fb55c08|perc1b|sb:cb520|si:bz1d10.4|wu:fb55c08
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator 1 beta
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 22082 bases
Position: chrKV410820.1:2566257-2588338
Accession: ZDB-GENE-030616-43
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015004702	RRM_1	PF00076.22	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015004777	-	2076	-	ENSSFOP00015004702	691 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003048	ppargc1b	93	70.192	ENSAMXG00000010665	ppargc1b	87	61.372	Astyanax_mexicanus
ENSSFOG00015003048	ppargc1b	54	71.681	ENSDARG00000101569	ppargc1b	88	63.534	Danio_rerio
ENSSFOG00015003048	ppargc1b	99	59.636	ENSELUG00000014929	ppargc1b	88	60.000	Esox_lucius
ENSSFOG00015003048	ppargc1b	92	65.714	ENSIPUG00000001584	Ppargc1b	87	57.971	Ictalurus_punctatus
ENSSFOG00015003048	ppargc1b	93	65.258	ENSLOCG00000012195	ppargc1b	90	59.398	Lepisosteus_oculatus
ENSSFOG00015003048	ppargc1b	91	70.588	ENSPNAG00000023871	ppargc1b	89	61.957	Pygocentrus_nattereri
ENSSFOG00015003048	ppargc1b	90	38.346	ENSSPUG00000019271	PPARGC1B	84	38.346	Sphenodon_punctatus