EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015003196 (Gene tree)
Gene ID: -
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 9063 bases
Position: chrKV411137.1:2257919-2266981
Accession: 108937038
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015004970	MA3	PF02847.17	1.3e-20	1	1
ENSSFOP00015004970	MIF4G	PF02854.19	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015005049	-	1422	XM_018756784	ENSSFOP00015004970	473 (aa)	XP_018612300	-

Gene Model

Click here to download ENSSFOG00015003196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003196's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003196	nom1	99	65.768	ENSG00000146909	NOM1	56	65.768	Homo_sapiens
ENSSFOG00015003196	nom1	100	73.663	ENSAPOG00000012073	nom1	57	73.663	Acanthochromis_polyacanthus
ENSSFOG00015003196	nom1	99	64.449	ENSAMEG00000001412	NOM1	67	64.449	Ailuropoda_melanoleuca
ENSSFOG00015003196	nom1	100	73.511	ENSACIG00000018050	nom1	63	73.511	Amphilophus_citrinellus
ENSSFOG00015003196	nom1	100	73.045	ENSAOCG00000006229	nom1	57	73.045	Amphiprion_ocellaris
ENSSFOG00015003196	nom1	100	73.045	ENSAPEG00000015994	nom1	58	73.045	Amphiprion_percula
ENSSFOG00015003196	nom1	100	72.428	ENSATEG00000005405	nom1	60	72.428	Anabas_testudineus
ENSSFOG00015003196	nom1	99	65.361	ENSAPLG00000006585	NOM1	74	65.361	Anas_platyrhynchos
ENSSFOG00015003196	nom1	100	64.463	ENSACAG00000011192	NOM1	57	64.463	Anolis_carolinensis
ENSSFOG00015003196	nom1	100	73.045	ENSACLG00000000033	nom1	58	73.045	Astatotilapia_calliptera
ENSSFOG00015003196	nom1	100	73.006	ENSAMXG00000041486	nom1	56	73.006	Astyanax_mexicanus
ENSSFOG00015003196	nom1	99	63.975	ENSBTAG00000016435	NOM1	54	66.447	Bos_taurus
ENSSFOG00015003196	nom1	99	66.250	ENSCJAG00000004336	NOM1	56	66.250	Callithrix_jacchus
ENSSFOG00015003196	nom1	99	64.730	ENSCAFG00020005121	NOM1	56	64.730	Canis_lupus_dingo
ENSSFOG00015003196	nom1	99	63.768	ENSCHIG00000020102	NOM1	57	63.768	Capra_hircus
ENSSFOG00015003196	nom1	99	64.449	ENSTSYG00000000227	NOM1	57	64.449	Carlito_syrichta
ENSSFOG00015003196	nom1	98	64.916	ENSCAPG00000016273	NOM1	91	64.916	Cavia_aperea
ENSSFOG00015003196	nom1	99	59.916	ENSCPOG00000025538	NOM1	55	59.916	Cavia_porcellus
ENSSFOG00015003196	nom1	86	64.692	ENSCCAG00000014944	NOM1	99	64.124	Cebus_capucinus
ENSSFOG00015003196	nom1	97	64.271	ENSCLAG00000000267	NOM1	56	64.407	Chinchilla_lanigera
ENSSFOG00015003196	nom1	100	66.049	ENSCPBG00000018215	NOM1	55	66.049	Chrysemys_picta_bellii
ENSSFOG00015003196	nom1	94	39.696	ENSCING00000005248	-	62	39.696	Ciona_intestinalis
ENSSFOG00015003196	nom1	99	65.560	ENSCANG00000041984	NOM1	83	65.560	Colobus_angolensis_palliatus
ENSSFOG00015003196	nom1	99	62.500	ENSCGRG00001020293	Nom1	56	62.708	Cricetulus_griseus_chok1gshd
ENSSFOG00015003196	nom1	99	62.500	ENSCGRG00000005405	Nom1	90	62.500	Cricetulus_griseus_crigri
ENSSFOG00015003196	nom1	93	75.000	ENSCSEG00000000932	nom1	56	75.000	Cynoglossus_semilaevis
ENSSFOG00015003196	nom1	100	72.016	ENSCVAG00000007562	nom1	58	72.016	Cyprinodon_variegatus
ENSSFOG00015003196	nom1	100	69.610	ENSDARG00000060027	nom1	100	69.610	Danio_rerio
ENSSFOG00015003196	nom1	99	54.526	ENSDORG00000015682	Nom1	69	54.280	Dipodomys_ordii
ENSSFOG00015003196	nom1	92	38.074	FBgn0035336	CG9004	53	38.074	Drosophila_melanogaster
ENSSFOG00015003196	nom1	89	50.572	ENSEBUG00000010077	nom1	96	50.572	Eptatretus_burgeri
ENSSFOG00015003196	nom1	99	66.183	ENSEASG00005001489	NOM1	57	66.183	Equus_asinus_asinus
ENSSFOG00015003196	nom1	99	65.975	ENSECAG00000007596	NOM1	52	65.975	Equus_caballus
ENSSFOG00015003196	nom1	100	73.457	ENSELUG00000006266	nom1	57	73.457	Esox_lucius
ENSSFOG00015003196	nom1	99	65.489	ENSFCAG00000006467	NOM1	58	65.489	Felis_catus
ENSSFOG00015003196	nom1	100	65.844	ENSFALG00000006904	NOM1	70	65.844	Ficedula_albicollis
ENSSFOG00015003196	nom1	99	63.048	ENSFDAG00000016241	NOM1	58	63.048	Fukomys_damarensis
ENSSFOG00015003196	nom1	100	73.663	ENSFHEG00000015974	nom1	59	73.663	Fundulus_heteroclitus
ENSSFOG00015003196	nom1	100	69.295	ENSGMOG00000005129	nom1	63	69.295	Gadus_morhua
ENSSFOG00015003196	nom1	100	64.403	ENSGALG00000006437	NOM1	56	64.403	Gallus_gallus
ENSSFOG00015003196	nom1	100	72.222	ENSGAFG00000003211	nom1	59	72.222	Gambusia_affinis
ENSSFOG00015003196	nom1	100	66.461	ENSGAGG00000014347	NOM1	59	66.255	Gopherus_agassizii
ENSSFOG00015003196	nom1	99	65.489	ENSGGOG00000010920	NOM1	52	65.696	Gorilla_gorilla
ENSSFOG00015003196	nom1	100	72.840	ENSHBUG00000014616	nom1	58	72.840	Haplochromis_burtoni
ENSSFOG00015003196	nom1	99	65.417	ENSHGLG00000007392	NOM1	55	65.417	Heterocephalus_glaber_female
ENSSFOG00015003196	nom1	99	65.417	ENSHGLG00100014407	NOM1	55	65.417	Heterocephalus_glaber_male
ENSSFOG00015003196	nom1	64	70.064	ENSHCOG00000011999	-	84	70.064	Hippocampus_comes
ENSSFOG00015003196	nom1	100	71.546	ENSIPUG00000013980	nom1	58	71.546	Ictalurus_punctatus
ENSSFOG00015003196	nom1	99	63.883	ENSSTOG00000031736	NOM1	84	63.883	Ictidomys_tridecemlineatus
ENSSFOG00015003196	nom1	98	64.706	ENSJJAG00000011716	Nom1	96	64.706	Jaculus_jaculus
ENSSFOG00015003196	nom1	100	73.511	ENSLBEG00000009252	nom1	57	73.511	Labrus_bergylta
ENSSFOG00015003196	nom1	100	69.547	ENSLACG00000011777	NOM1	59	69.547	Latimeria_chalumnae
ENSSFOG00015003196	nom1	100	72.840	ENSLOCG00000012452	nom1	60	72.840	Lepisosteus_oculatus
ENSSFOG00015003196	nom1	99	59.414	ENSLAFG00000007119	NOM1	58	59.414	Loxodonta_africana
ENSSFOG00015003196	nom1	99	61.653	ENSMMUG00000039033	NOM1	55	61.945	Macaca_mulatta
ENSSFOG00015003196	nom1	99	65.353	ENSMLEG00000037062	NOM1	91	65.353	Mandrillus_leucophaeus
ENSSFOG00015003196	nom1	100	72.336	ENSMAMG00000004118	nom1	58	72.336	Mastacembelus_armatus
ENSSFOG00015003196	nom1	100	73.045	ENSMZEG00005000384	nom1	58	73.045	Maylandia_zebra
ENSSFOG00015003196	nom1	99	64.948	ENSMGAG00000005051	NOM1	71	64.948	Meleagris_gallopavo
ENSSFOG00015003196	nom1	99	63.750	ENSMAUG00000017988	Nom1	58	63.750	Mesocricetus_auratus
ENSSFOG00015003196	nom1	99	65.344	ENSMICG00000017531	NOM1	57	65.625	Microcebus_murinus
ENSSFOG00015003196	nom1	99	62.708	ENSMOCG00000015962	Nom1	57	62.708	Microtus_ochrogaster
ENSSFOG00015003196	nom1	100	64.892	ENSMMOG00000004419	nom1	60	64.892	Mola_mola
ENSSFOG00015003196	nom1	99	66.458	ENSMODG00000005177	NOM1	57	66.458	Monodelphis_domestica
ENSSFOG00015003196	nom1	90	75.171	ENSMALG00000008800	nom1	56	75.171	Monopterus_albus
ENSSFOG00015003196	nom1	99	62.708	MGP_CAROLIEiJ_G0027043	Nom1	56	62.708	Mus_caroli
ENSSFOG00015003196	nom1	99	62.708	ENSMUSG00000001569	Nom1	56	62.708	Mus_musculus
ENSSFOG00015003196	nom1	99	62.708	MGP_SPRETEiJ_G0028039	Nom1	56	62.708	Mus_spretus
ENSSFOG00015003196	nom1	99	65.560	ENSMPUG00000009745	NOM1	70	65.560	Mustela_putorius_furo
ENSSFOG00015003196	nom1	99	64.523	ENSMLUG00000009129	NOM1	80	64.523	Myotis_lucifugus
ENSSFOG00015003196	nom1	100	72.840	ENSNBRG00000016429	nom1	87	72.634	Neolamprologus_brichardi
ENSSFOG00015003196	nom1	99	64.092	ENSNLEG00000000238	NOM1	56	64.092	Nomascus_leucogenys
ENSSFOG00015003196	nom1	99	62.422	ENSODEG00000009399	NOM1	69	62.422	Octodon_degus
ENSSFOG00015003196	nom1	100	72.016	ENSONIG00000005958	nom1	62	72.016	Oreochromis_niloticus
ENSSFOG00015003196	nom1	95	64.286	ENSOANG00000006139	-	97	64.286	Ornithorhynchus_anatinus
ENSSFOG00015003196	nom1	99	54.470	ENSOCUG00000021448	-	65	54.470	Oryctolagus_cuniculus
ENSSFOG00015003196	nom1	99	66.598	ENSOCUG00000004071	-	57	66.598	Oryctolagus_cuniculus
ENSSFOG00015003196	nom1	99	71.014	ENSORLG00000010541	nom1	58	71.014	Oryzias_latipes
ENSSFOG00015003196	nom1	99	71.014	ENSORLG00020010789	nom1	63	71.014	Oryzias_latipes_hni
ENSSFOG00015003196	nom1	99	70.807	ENSORLG00015010475	nom1	63	70.807	Oryzias_latipes_hsok
ENSSFOG00015003196	nom1	99	72.257	ENSOMEG00000004219	nom1	58	72.257	Oryzias_melastigma
ENSSFOG00015003196	nom1	99	64.657	ENSOGAG00000001124	NOM1	79	64.657	Otolemur_garnettii
ENSSFOG00015003196	nom1	95	65.739	ENSOARG00000007261	NOM1	62	66.447	Ovis_aries
ENSSFOG00015003196	nom1	99	65.073	ENSPPAG00000041374	NOM1	56	65.073	Pan_paniscus
ENSSFOG00015003196	nom1	99	65.353	ENSPTIG00000013532	NOM1	66	65.353	Panthera_tigris_altaica
ENSSFOG00015003196	nom1	99	65.073	ENSPTRG00000019917	NOM1	56	65.073	Pan_troglodytes
ENSSFOG00015003196	nom1	99	65.353	ENSPANG00000007605	NOM1	56	65.353	Papio_anubis
ENSSFOG00015003196	nom1	100	74.639	ENSPKIG00000005825	nom1	59	74.639	Paramormyrops_kingsleyae
ENSSFOG00015003196	nom1	100	66.186	ENSPSIG00000017848	NOM1	81	66.186	Pelodiscus_sinensis
ENSSFOG00015003196	nom1	100	71.605	ENSPMGG00000002577	nom1	60	71.605	Periophthalmus_magnuspinnatus
ENSSFOG00015003196	nom1	99	62.708	ENSPEMG00000024180	Nom1	56	62.708	Peromyscus_maniculatus_bairdii
ENSSFOG00015003196	nom1	54	55.160	ENSPMAG00000002136	-	96	55.160	Petromyzon_marinus
ENSSFOG00015003196	nom1	99	65.904	ENSPCIG00000027941	NOM1	53	65.904	Phascolarctos_cinereus
ENSSFOG00015003196	nom1	100	72.222	ENSPFOG00000015771	nom1	58	72.222	Poecilia_formosa
ENSSFOG00015003196	nom1	100	72.016	ENSPLAG00000007856	nom1	60	72.016	Poecilia_latipinna
ENSSFOG00015003196	nom1	100	71.811	ENSPMEG00000014155	nom1	60	71.811	Poecilia_mexicana
ENSSFOG00015003196	nom1	100	71.811	ENSPREG00000008850	nom1	59	71.811	Poecilia_reticulata
ENSSFOG00015003196	nom1	99	58.958	ENSPPYG00000018222	NOM1	54	58.958	Pongo_abelii
ENSSFOG00015003196	nom1	87	58.531	ENSPCAG00000000440	NOM1	53	58.531	Procavia_capensis
ENSSFOG00015003196	nom1	99	64.865	ENSPCOG00000015222	NOM1	91	64.865	Propithecus_coquereli
ENSSFOG00015003196	nom1	98	63.866	ENSPVAG00000014760	NOM1	55	64.076	Pteropus_vampyrus
ENSSFOG00015003196	nom1	100	72.840	ENSPNYG00000006975	nom1	88	72.634	Pundamilia_nyererei
ENSSFOG00015003196	nom1	100	71.107	ENSPNAG00000011085	nom1	55	71.107	Pygocentrus_nattereri
ENSSFOG00015003196	nom1	99	60.125	ENSRNOG00000048969	AABR07059041.1	59	60.125	Rattus_norvegicus
ENSSFOG00015003196	nom1	99	65.281	ENSRBIG00000037042	NOM1	56	65.281	Rhinopithecus_bieti
ENSSFOG00015003196	nom1	99	65.281	ENSRROG00000037293	NOM1	56	65.281	Rhinopithecus_roxellana
ENSSFOG00015003196	nom1	76	60.541	ENSSHAG00000002835	-	89	60.705	Sarcophilus_harrisii
ENSSFOG00015003196	nom1	99	65.625	ENSSHAG00000017998	-	71	65.625	Sarcophilus_harrisii
ENSSFOG00015003196	nom1	100	73.457	ENSSMAG00000011047	nom1	58	73.457	Scophthalmus_maximus
ENSSFOG00015003196	nom1	100	74.743	ENSSDUG00000006834	nom1	58	74.743	Seriola_dumerili
ENSSFOG00015003196	nom1	100	74.280	ENSSLDG00000021812	nom1	58	74.280	Seriola_lalandi_dorsalis
ENSSFOG00015003196	nom1	100	54.268	ENSSPUG00000002556	NOM1	100	53.459	Sphenodon_punctatus
ENSSFOG00015003196	nom1	100	73.457	ENSSPAG00000000953	nom1	57	73.457	Stegastes_partitus
ENSSFOG00015003196	nom1	61	66.007	ENSTGUG00000016587	-	88	66.007	Taeniopygia_guttata
ENSSFOG00015003196	nom1	100	65.432	ENSTGUG00000000702	-	69	65.432	Taeniopygia_guttata
ENSSFOG00015003196	nom1	100	71.605	ENSTRUG00000010239	nom1	58	71.605	Takifugu_rubripes
ENSSFOG00015003196	nom1	100	71.193	ENSTNIG00000012783	nom1	62	71.193	Tetraodon_nigroviridis
ENSSFOG00015003196	nom1	97	63.983	ENSTTRG00000009691	NOM1	56	63.983	Tursiops_truncatus
ENSSFOG00015003196	nom1	99	65.145	ENSUAMG00000025450	NOM1	55	65.145	Ursus_americanus
ENSSFOG00015003196	nom1	99	65.145	ENSUMAG00000014275	NOM1	70	65.145	Ursus_maritimus
ENSSFOG00015003196	nom1	99	64.730	ENSVVUG00000002608	NOM1	56	64.730	Vulpes_vulpes
ENSSFOG00015003196	nom1	100	64.669	ENSXETG00000021611	nom1	80	71.357	Xenopus_tropicalis
ENSSFOG00015003196	nom1	100	71.605	ENSXMAG00000002451	nom1	59	71.605	Xiphophorus_maculatus