EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015003256 (Gene tree)
Gene ID: 108937489
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 15962 bases
Position: chrKV411145.1:5049396-5065357
Accession: 108937489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015004952	La	PF05383.17	5.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015005031	LARP4B-201	6792	XM_018757482	ENSSFOP00015004952	792 (aa)	XP_018612998	-

Gene Model

Click here to download ENSSFOG00015003256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003256's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015003256	LARP4B	72	39.333	ENSSFOG00015014096	larp4ab	86	37.571
ENSSFOG00015003256	LARP4B	81	39.426	ENSSFOG00015003868	larp4aa	84	39.608

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003256	LARP4B	90	57.333	ENSG00000107929	LARP4B	91	59.052	Homo_sapiens
ENSSFOG00015003256	LARP4B	78	66.244	ENSAPOG00000020531	LARP4B	93	65.696	Acanthochromis_polyacanthus
ENSSFOG00015003256	LARP4B	82	59.680	ENSAMEG00000001810	LARP4B	92	58.941	Ailuropoda_melanoleuca
ENSSFOG00015003256	LARP4B	87	57.571	ENSAOCG00000007887	-	80	84.314	Amphiprion_ocellaris
ENSSFOG00015003256	LARP4B	86	63.598	ENSAPEG00000002512	LARP4B	91	62.343	Amphiprion_percula
ENSSFOG00015003256	LARP4B	93	60.025	ENSATEG00000012614	LARP4B	93	61.497	Anabas_testudineus
ENSSFOG00015003256	LARP4B	92	60.841	ENSAPLG00000003813	LARP4B	96	60.686	Anas_platyrhynchos
ENSSFOG00015003256	LARP4B	93	63.454	ENSACAG00000002858	LARP4B	100	62.918	Anolis_carolinensis
ENSSFOG00015003256	LARP4B	90	57.677	ENSANAG00000007531	-	96	57.085	Aotus_nancymaae
ENSSFOG00015003256	LARP4B	93	60.606	ENSACLG00000026356	LARP4B	92	63.624	Astatotilapia_calliptera
ENSSFOG00015003256	LARP4B	89	53.542	ENSAMXG00000003335	larp4b	98	52.589	Astyanax_mexicanus
ENSSFOG00015003256	LARP4B	93	58.367	ENSBTAG00000013899	LARP4B	99	57.808	Bos_taurus
ENSSFOG00015003256	LARP4B	90	57.584	ENSCJAG00000018434	LARP4B	96	56.604	Callithrix_jacchus
ENSSFOG00015003256	LARP4B	82	60.435	ENSCAFG00020004209	LARP4B	92	59.687	Canis_lupus_dingo
ENSSFOG00015003256	LARP4B	90	57.965	ENSCHIG00000013543	LARP4B	92	59.286	Capra_hircus
ENSSFOG00015003256	LARP4B	72	64.777	ENSTSYG00000002568	LARP4B	88	68.233	Carlito_syrichta
ENSSFOG00015003256	LARP4B	80	55.728	ENSCAPG00000009725	LARP4B	80	57.500	Cavia_aperea
ENSSFOG00015003256	LARP4B	90	58.523	ENSCPOG00000009375	LARP4B	91	60.229	Cavia_porcellus
ENSSFOG00015003256	LARP4B	90	57.718	ENSCCAG00000024869	LARP4B	96	57.123	Cebus_capucinus
ENSSFOG00015003256	LARP4B	90	58.000	ENSCATG00000019750	LARP4B	91	59.770	Cercocebus_atys
ENSSFOG00015003256	LARP4B	90	59.615	ENSCLAG00000011570	LARP4B	91	61.595	Chinchilla_lanigera
ENSSFOG00015003256	LARP4B	56	84.848	ENSCHOG00000007831	-	54	84.848	Choloepus_hoffmanni
ENSSFOG00015003256	LARP4B	93	62.013	ENSCPBG00000017063	LARP4B	96	63.025	Chrysemys_picta_bellii
ENSSFOG00015003256	LARP4B	90	56.133	ENSCANG00000038021	LARP4B	91	57.615	Colobus_angolensis_palliatus
ENSSFOG00015003256	LARP4B	90	57.580	ENSCGRG00001022930	Larp4b	91	59.371	Cricetulus_griseus_chok1gshd
ENSSFOG00015003256	LARP4B	90	57.580	ENSCGRG00000006022	Larp4b	91	59.371	Cricetulus_griseus_crigri
ENSSFOG00015003256	LARP4B	93	55.570	ENSCSEG00000007342	LARP4B	96	55.216	Cynoglossus_semilaevis
ENSSFOG00015003256	LARP4B	93	59.518	ENSCVAG00000008910	LARP4B	95	59.225	Cyprinodon_variegatus
ENSSFOG00015003256	LARP4B	88	53.463	ENSDARG00000062146	larp4b	96	52.500	Danio_rerio
ENSSFOG00015003256	LARP4B	86	57.720	ENSDNOG00000045543	-	99	62.151	Dasypus_novemcinctus
ENSSFOG00015003256	LARP4B	90	56.242	ENSDORG00000009328	Larp4b	91	58.143	Dipodomys_ordii
ENSSFOG00015003256	LARP4B	81	57.550	ENSETEG00000011249	LARP4B	81	58.333	Echinops_telfairi
ENSSFOG00015003256	LARP4B	84	59.163	ENSEASG00005019068	-	92	58.883	Equus_asinus_asinus
ENSSFOG00015003256	LARP4B	84	59.163	ENSECAG00000024040	LARP4B	92	58.883	Equus_caballus
ENSSFOG00015003256	LARP4B	84	58.798	ENSEEUG00000008391	LARP4B	95	55.792	Erinaceus_europaeus
ENSSFOG00015003256	LARP4B	89	62.665	ENSELUG00000008626	LARP4B	96	61.987	Esox_lucius
ENSSFOG00015003256	LARP4B	84	40.000	ENSELUG00000001417	-	97	39.042	Esox_lucius
ENSSFOG00015003256	LARP4B	82	60.116	ENSFCAG00000000721	-	92	59.943	Felis_catus
ENSSFOG00015003256	LARP4B	90	62.637	ENSFALG00000006961	LARP4B	96	61.411	Ficedula_albicollis
ENSSFOG00015003256	LARP4B	90	59.304	ENSFDAG00000006158	LARP4B	93	58.155	Fukomys_damarensis
ENSSFOG00015003256	LARP4B	90	54.631	ENSFHEG00000013037	LARP4B	65	91.597	Fundulus_heteroclitus
ENSSFOG00015003256	LARP4B	65	77.273	ENSGMOG00000010818	-	79	77.273	Gadus_morhua
ENSSFOG00015003256	LARP4B	90	62.551	ENSGALG00000006672	LARP4B	96	62.500	Gallus_gallus
ENSSFOG00015003256	LARP4B	95	58.313	ENSGACG00000017535	LARP4B	95	58.684	Gasterosteus_aculeatus
ENSSFOG00015003256	LARP4B	87	60.485	ENSGAGG00000008598	LARP4B	96	61.286	Gopherus_agassizii
ENSSFOG00015003256	LARP4B	90	57.600	ENSGGOG00000003572	LARP4B	91	59.195	Gorilla_gorilla
ENSSFOG00015003256	LARP4B	93	59.848	ENSHBUG00000007535	LARP4B	91	62.656	Haplochromis_burtoni
ENSSFOG00015003256	LARP4B	90	58.824	ENSHGLG00000012936	LARP4B	91	60.684	Heterocephalus_glaber_female
ENSSFOG00015003256	LARP4B	81	53.040	ENSHGLG00100017261	-	100	52.102	Heterocephalus_glaber_male
ENSSFOG00015003256	LARP4B	90	58.713	ENSHGLG00100016220	-	91	60.571	Heterocephalus_glaber_male
ENSSFOG00015003256	LARP4B	88	77.358	ENSHCOG00000011581	LARP4B	82	77.358	Hippocampus_comes
ENSSFOG00015003256	LARP4B	89	52.617	ENSIPUG00000009705	larp4b	98	51.377	Ictalurus_punctatus
ENSSFOG00015003256	LARP4B	90	57.392	ENSSTOG00000000587	LARP4B	91	59.393	Ictidomys_tridecemlineatus
ENSSFOG00015003256	LARP4B	90	58.255	ENSJJAG00000020847	Larp4b	91	60.231	Jaculus_jaculus
ENSSFOG00015003256	LARP4B	93	59.975	ENSKMAG00000021674	LARP4B	92	66.545	Kryptolebias_marmoratus
ENSSFOG00015003256	LARP4B	80	65.303	ENSLBEG00000025293	-	85	66.879	Labrus_bergylta
ENSSFOG00015003256	LARP4B	87	61.714	ENSLACG00000009492	LARP4B	96	62.275	Latimeria_chalumnae
ENSSFOG00015003256	LARP4B	93	65.513	ENSLOCG00000012290	larp4b	100	65.513	Lepisosteus_oculatus
ENSSFOG00015003256	LARP4B	90	58.831	ENSLAFG00000015334	LARP4B	91	60.969	Loxodonta_africana
ENSSFOG00015003256	LARP4B	90	58.133	ENSMFAG00000001766	LARP4B	91	57.615	Macaca_fascicularis
ENSSFOG00015003256	LARP4B	90	58.133	ENSMMUG00000005279	LARP4B	91	59.629	Macaca_mulatta
ENSSFOG00015003256	LARP4B	90	58.000	ENSMNEG00000014019	LARP4B	91	57.471	Macaca_nemestrina
ENSSFOG00015003256	LARP4B	90	58.056	ENSMLEG00000035198	LARP4B	91	59.626	Mandrillus_leucophaeus
ENSSFOG00015003256	LARP4B	93	59.773	ENSMAMG00000013742	LARP4B	94	61.580	Mastacembelus_armatus
ENSSFOG00015003256	LARP4B	87	58.367	ENSMZEG00005014594	-	91	61.209	Maylandia_zebra
ENSSFOG00015003256	LARP4B	78	92.593	ENSMZEG00005006498	-	92	92.593	Maylandia_zebra
ENSSFOG00015003256	LARP4B	90	58.378	ENSMGAG00000005472	LARP4B	96	58.537	Meleagris_gallopavo
ENSSFOG00015003256	LARP4B	90	58.035	ENSMAUG00000021657	Larp4b	91	59.773	Mesocricetus_auratus
ENSSFOG00015003256	LARP4B	90	58.815	ENSMICG00000001301	LARP4B	89	61.782	Microcebus_murinus
ENSSFOG00015003256	LARP4B	71	61.630	ENSMOCG00000021452	Larp4b	86	61.290	Microtus_ochrogaster
ENSSFOG00015003256	LARP4B	82	92.593	ENSMMOG00000011253	-	83	92.593	Mola_mola
ENSSFOG00015003256	LARP4B	93	57.181	ENSMODG00000005957	LARP4B	92	59.855	Monodelphis_domestica
ENSSFOG00015003256	LARP4B	93	52.209	ENSMALG00000012432	LARP4B	94	53.391	Monopterus_albus
ENSSFOG00015003256	LARP4B	90	57.527	MGP_CAROLIEiJ_G0018216	Larp4b	91	60.000	Mus_caroli
ENSSFOG00015003256	LARP4B	93	56.584	ENSMUSG00000033499	Larp4b	91	59.828	Mus_musculus
ENSSFOG00015003256	LARP4B	93	56.957	MGP_PahariEiJ_G0019266	Larp4b	91	59.568	Mus_pahari
ENSSFOG00015003256	LARP4B	93	56.454	MGP_SPRETEiJ_G0019074	Larp4b	91	59.684	Mus_spretus
ENSSFOG00015003256	LARP4B	86	59.691	ENSMPUG00000016220	LARP4B	91	58.946	Mustela_putorius_furo
ENSSFOG00015003256	LARP4B	78	60.514	ENSMLUG00000005880	LARP4B	92	58.036	Myotis_lucifugus
ENSSFOG00015003256	LARP4B	90	57.810	ENSNGAG00000001750	Larp4b	91	60.174	Nannospalax_galili
ENSSFOG00015003256	LARP4B	79	92.593	ENSNBRG00000020018	LARP4B	82	92.593	Neolamprologus_brichardi
ENSSFOG00015003256	LARP4B	90	57.600	ENSNLEG00000013442	LARP4B	91	59.195	Nomascus_leucogenys
ENSSFOG00015003256	LARP4B	75	47.268	ENSMEUG00000013114	-	75	49.521	Notamacropus_eugenii
ENSSFOG00015003256	LARP4B	90	54.993	ENSOPRG00000003300	LARP4B	91	57.082	Ochotona_princeps
ENSSFOG00015003256	LARP4B	90	54.631	ENSODEG00000001109	LARP4B	91	56.484	Octodon_degus
ENSSFOG00015003256	LARP4B	93	60.579	ENSONIG00000017705	LARP4B	92	63.448	Oreochromis_niloticus
ENSSFOG00015003256	LARP4B	93	56.499	ENSOANG00000006100	LARP4B	96	57.085	Ornithorhynchus_anatinus
ENSSFOG00015003256	LARP4B	90	56.380	ENSOCUG00000004950	LARP4B	94	55.685	Oryctolagus_cuniculus
ENSSFOG00015003256	LARP4B	93	58.981	ENSORLG00000006080	LARP4B	93	60.385	Oryzias_latipes
ENSSFOG00015003256	LARP4B	93	58.577	ENSORLG00020020940	LARP4B	93	59.945	Oryzias_latipes_hni
ENSSFOG00015003256	LARP4B	93	58.142	ENSORLG00015020608	LARP4B	93	59.808	Oryzias_latipes_hsok
ENSSFOG00015003256	LARP4B	93	57.888	ENSOMEG00000019619	LARP4B	93	59.671	Oryzias_melastigma
ENSSFOG00015003256	LARP4B	86	58.405	ENSOGAG00000011540	LARP4B	90	60.123	Otolemur_garnettii
ENSSFOG00015003256	LARP4B	94	56.505	ENSOARG00000015320	LARP4B	99	56.031	Ovis_aries
ENSSFOG00015003256	LARP4B	90	57.333	ENSPPAG00000039232	LARP4B	91	59.052	Pan_paniscus
ENSSFOG00015003256	LARP4B	82	60.206	ENSPPRG00000009489	LARP4B	92	59.943	Panthera_pardus
ENSSFOG00015003256	LARP4B	82	60.206	ENSPTIG00000008543	LARP4B	92	59.943	Panthera_tigris_altaica
ENSSFOG00015003256	LARP4B	90	57.333	ENSPTRG00000002235	LARP4B	91	59.052	Pan_troglodytes
ENSSFOG00015003256	LARP4B	90	58.133	ENSPANG00000023546	LARP4B	91	57.615	Papio_anubis
ENSSFOG00015003256	LARP4B	92	68.708	ENSPKIG00000012368	LARP4B	99	67.776	Paramormyrops_kingsleyae
ENSSFOG00015003256	LARP4B	70	71.069	ENSPSIG00000005600	LARP4B	99	70.755	Pelodiscus_sinensis
ENSSFOG00015003256	LARP4B	86	53.922	ENSPMGG00000008261	LARP4B	87	53.641	Periophthalmus_magnuspinnatus
ENSSFOG00015003256	LARP4B	90	57.769	ENSPEMG00000014052	Larp4b	91	59.828	Peromyscus_maniculatus_bairdii
ENSSFOG00015003256	LARP4B	93	59.623	ENSPFOG00000000029	LARP4B	92	61.370	Poecilia_formosa
ENSSFOG00015003256	LARP4B	93	59.824	ENSPLAG00000002871	LARP4B	92	61.866	Poecilia_latipinna
ENSSFOG00015003256	LARP4B	93	59.548	ENSPMEG00000016361	LARP4B	92	61.286	Poecilia_mexicana
ENSSFOG00015003256	LARP4B	93	56.057	ENSPPYG00000002035	LARP4B	91	57.618	Pongo_abelii
ENSSFOG00015003256	LARP4B	90	58.658	ENSPCOG00000014688	LARP4B	96	58.288	Propithecus_coquereli
ENSSFOG00015003256	LARP4B	75	58.361	ENSPVAG00000009784	LARP4B	74	61.896	Pteropus_vampyrus
ENSSFOG00015003256	LARP4B	93	60.732	ENSPNYG00000024252	LARP4B	92	63.762	Pundamilia_nyererei
ENSSFOG00015003256	LARP4B	89	53.268	ENSPNAG00000028956	larp4b	98	52.083	Pygocentrus_nattereri
ENSSFOG00015003256	LARP4B	90	57.257	ENSRNOG00000015888	Larp4b	92	60.254	Rattus_norvegicus
ENSSFOG00015003256	LARP4B	90	58.121	ENSRBIG00000033294	LARP4B	96	57.724	Rhinopithecus_bieti
ENSSFOG00015003256	LARP4B	90	58.255	ENSRROG00000033879	LARP4B	96	57.995	Rhinopithecus_roxellana
ENSSFOG00015003256	LARP4B	90	52.483	ENSSBOG00000021109	LARP4B	96	51.887	Saimiri_boliviensis_boliviensis
ENSSFOG00015003256	LARP4B	90	59.290	ENSSHAG00000013392	LARP4B	92	61.618	Sarcophilus_harrisii
ENSSFOG00015003256	LARP4B	78	92.593	ENSSMAG00000005982	-	91	92.593	Scophthalmus_maximus
ENSSFOG00015003256	LARP4B	93	60.710	ENSSDUG00000006704	LARP4B	94	61.186	Seriola_dumerili
ENSSFOG00015003256	LARP4B	80	74.286	ENSSLDG00000020660	LARP4B	90	74.286	Seriola_lalandi_dorsalis
ENSSFOG00015003256	LARP4B	59	87.255	ENSSARG00000001243	-	66	87.255	Sorex_araneus
ENSSFOG00015003256	LARP4B	80	69.231	ENSSPUG00000013734	-	95	69.231	Sphenodon_punctatus
ENSSFOG00015003256	LARP4B	93	61.290	ENSSPUG00000002102	-	96	62.079	Sphenodon_punctatus
ENSSFOG00015003256	LARP4B	79	96.296	ENSSPAG00000014628	LARP4B	82	96.296	Stegastes_partitus
ENSSFOG00015003256	LARP4B	93	57.441	ENSSSCG00000011162	LARP4B	97	61.093	Sus_scrofa
ENSSFOG00015003256	LARP4B	90	61.781	ENSTGUG00000000811	-	96	60.548	Taeniopygia_guttata
ENSSFOG00015003256	LARP4B	91	56.298	ENSTNIG00000004571	-	94	57.388	Tetraodon_nigroviridis
ENSSFOG00015003256	LARP4B	91	55.115	ENSTNIG00000007991	LARP4B	99	60.028	Tetraodon_nigroviridis
ENSSFOG00015003256	LARP4B	74	61.057	ENSTTRG00000011151	LARP4B	81	60.792	Tursiops_truncatus
ENSSFOG00015003256	LARP4B	80	60.000	ENSUAMG00000016461	LARP4B	95	59.427	Ursus_americanus
ENSSFOG00015003256	LARP4B	82	60.176	ENSUMAG00000016127	LARP4B	92	59.596	Ursus_maritimus
ENSSFOG00015003256	LARP4B	82	60.116	ENSVVUG00000008641	LARP4B	92	59.254	Vulpes_vulpes
ENSSFOG00015003256	LARP4B	90	63.674	ENSXETG00000016882	larp4b	96	63.445	Xenopus_tropicalis
ENSSFOG00015003256	LARP4B	93	53.631	ENSXCOG00000019952	LARP4B	68	86.614	Xiphophorus_couchianus
ENSSFOG00015003256	LARP4B	93	59.466	ENSXMAG00000021533	LARP4B	92	62.050	Xiphophorus_maculatus