EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015003298 (Gene tree)
Gene ID: 108923552
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 42859 bases
Position: chrKV410826.1:121823-164681
Accession: 108923552
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015005037	YTH	PF04146.15	4.1e-40	1	1
ENSSFOP00015005027	YTH	PF04146.15	4.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015005121	-	4077	XM_018734378	ENSSFOP00015005037	676 (aa)	XP_018589894	A0A1W4YE66
ENSSFOT00015005107	-	4167	XM_018734376	ENSSFOP00015005027	706 (aa)	XP_018589892	A0A1W4YEB4

Gene Model

Click here to download ENSSFOG00015003298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003298's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003298	ythdc1	60	86.019	ENSG00000083896	YTHDC1	85	83.750	Homo_sapiens
ENSSFOG00015003298	ythdc1	59	66.917	ENSAPOG00000013997	ythdc1	93	57.547	Acanthochromis_polyacanthus
ENSSFOG00015003298	ythdc1	60	86.493	ENSAMEG00000005688	YTHDC1	93	69.075	Ailuropoda_melanoleuca
ENSSFOG00015003298	ythdc1	59	70.631	ENSAOCG00000000239	ythdc1	94	60.606	Amphiprion_ocellaris
ENSSFOG00015003298	ythdc1	52	69.377	ENSAPEG00000000618	ythdc1	88	61.274	Amphiprion_percula
ENSSFOG00015003298	ythdc1	50	69.722	ENSATEG00000023007	ythdc1	91	63.149	Anabas_testudineus
ENSSFOG00015003298	ythdc1	91	70.776	ENSAPLG00000009921	YTHDC1	92	71.081	Anas_platyrhynchos
ENSSFOG00015003298	ythdc1	93	68.554	ENSACAG00000009697	YTHDC1	93	68.554	Anolis_carolinensis
ENSSFOG00015003298	ythdc1	60	86.019	ENSANAG00000001522	YTHDC1	93	68.406	Aotus_nancymaae
ENSSFOG00015003298	ythdc1	59	69.175	ENSACLG00000019371	ythdc1	94	60.790	Astatotilapia_calliptera
ENSSFOG00015003298	ythdc1	92	79.154	ENSAMXG00000006978	ythdc1	92	80.564	Astyanax_mexicanus
ENSSFOG00015003298	ythdc1	60	85.782	ENSBTAG00000015572	YTHDC1	93	68.307	Bos_taurus
ENSSFOG00015003298	ythdc1	60	86.019	ENSCJAG00000009934	YTHDC1	93	68.169	Callithrix_jacchus
ENSSFOG00015003298	ythdc1	60	86.493	ENSCAFG00000002821	YTHDC1	93	68.696	Canis_familiaris
ENSSFOG00015003298	ythdc1	60	86.493	ENSCAFG00020027112	YTHDC1	93	68.696	Canis_lupus_dingo
ENSSFOG00015003298	ythdc1	60	73.721	ENSCHIG00000004810	YTHDC1	95	67.362	Capra_hircus
ENSSFOG00015003298	ythdc1	60	86.019	ENSTSYG00000011668	YTHDC1	93	69.141	Carlito_syrichta
ENSSFOG00015003298	ythdc1	58	53.904	ENSCAPG00000008722	YTHDC1	90	47.840	Cavia_aperea
ENSSFOG00015003298	ythdc1	60	76.777	ENSCPOG00000010929	YTHDC1	92	62.845	Cavia_porcellus
ENSSFOG00015003298	ythdc1	60	86.019	ENSCCAG00000035754	YTHDC1	93	69.186	Cebus_capucinus
ENSSFOG00015003298	ythdc1	60	84.419	ENSCATG00000036320	YTHDC1	97	66.983	Cercocebus_atys
ENSSFOG00015003298	ythdc1	60	83.721	ENSCLAG00000005482	YTHDC1	92	68.275	Chinchilla_lanigera
ENSSFOG00015003298	ythdc1	60	86.019	ENSCSAG00000005252	YTHDC1	93	68.551	Chlorocebus_sabaeus
ENSSFOG00015003298	ythdc1	92	70.952	ENSCPBG00000021965	YTHDC1	94	69.531	Chrysemys_picta_bellii
ENSSFOG00015003298	ythdc1	60	86.019	ENSCANG00000004769	YTHDC1	96	66.793	Colobus_angolensis_palliatus
ENSSFOG00015003298	ythdc1	60	84.186	ENSCGRG00001000816	Ythdc1	93	67.626	Cricetulus_griseus_chok1gshd
ENSSFOG00015003298	ythdc1	60	85.782	ENSCGRG00000009807	Ythdc1	92	68.584	Cricetulus_griseus_crigri
ENSSFOG00015003298	ythdc1	59	68.618	ENSCSEG00000020404	ythdc1	94	62.100	Cynoglossus_semilaevis
ENSSFOG00015003298	ythdc1	59	68.235	ENSCVAG00000022349	ythdc1	94	61.231	Cyprinodon_variegatus
ENSSFOG00015003298	ythdc1	92	76.094	ENSDARG00000051953	ythdc1	92	75.943	Danio_rerio
ENSSFOG00015003298	ythdc1	93	68.768	ENSDNOG00000004949	YTHDC1	93	68.676	Dasypus_novemcinctus
ENSSFOG00015003298	ythdc1	60	86.019	ENSDORG00000013045	Ythdc1	92	68.960	Dipodomys_ordii
ENSSFOG00015003298	ythdc1	74	90.141	ENSETEG00000001878	YTHDC1	65	93.750	Echinops_telfairi
ENSSFOG00015003298	ythdc1	60	86.493	ENSEASG00005018383	YTHDC1	93	68.986	Equus_asinus_asinus
ENSSFOG00015003298	ythdc1	85	78.495	ENSECAG00000018303	YTHDC1	80	88.202	Equus_caballus
ENSSFOG00015003298	ythdc1	60	85.545	ENSEEUG00000015466	YTHDC1	93	68.841	Erinaceus_europaeus
ENSSFOG00015003298	ythdc1	92	73.182	ENSELUG00000014029	ythdc1	96	73.125	Esox_lucius
ENSSFOG00015003298	ythdc1	60	86.493	ENSFCAG00000026791	YTHDC1	93	68.886	Felis_catus
ENSSFOG00015003298	ythdc1	66	82.353	ENSFALG00000006581	YTHDC1	87	82.353	Ficedula_albicollis
ENSSFOG00015003298	ythdc1	60	85.545	ENSFDAG00000018560	YTHDC1	92	68.593	Fukomys_damarensis
ENSSFOG00015003298	ythdc1	74	49.302	ENSFHEG00000001286	ythdc1	81	48.201	Fundulus_heteroclitus
ENSSFOG00015003298	ythdc1	62	76.889	ENSGMOG00000018815	ythdc1	73	76.444	Gadus_morhua
ENSSFOG00015003298	ythdc1	91	70.928	ENSGALG00000035906	YTHDC1	88	68.566	Gallus_gallus
ENSSFOG00015003298	ythdc1	78	66.522	ENSGACG00000015486	ythdc1	94	54.779	Gasterosteus_aculeatus
ENSSFOG00015003298	ythdc1	92	70.616	ENSGAGG00000007108	YTHDC1	92	70.505	Gopherus_agassizii
ENSSFOG00015003298	ythdc1	60	84.419	ENSGGOG00000021958	YTHDC1	97	66.856	Gorilla_gorilla
ENSSFOG00015003298	ythdc1	59	69.175	ENSHBUG00000019288	ythdc1	93	60.790	Haplochromis_burtoni
ENSSFOG00015003298	ythdc1	60	83.953	ENSHGLG00000006319	-	93	68.307	Heterocephalus_glaber_female
ENSSFOG00015003298	ythdc1	94	56.994	ENSHGLG00000003239	-	86	57.034	Heterocephalus_glaber_female
ENSSFOG00015003298	ythdc1	94	55.407	ENSHGLG00100008060	-	86	55.403	Heterocephalus_glaber_male
ENSSFOG00015003298	ythdc1	60	84.038	ENSHGLG00100001556	-	93	68.268	Heterocephalus_glaber_male
ENSSFOG00015003298	ythdc1	57	74.468	ENSHCOG00000001520	ythdc1	75	74.468	Hippocampus_comes
ENSSFOG00015003298	ythdc1	93	76.418	ENSIPUG00000018136	ythdc1	92	77.361	Ictalurus_punctatus
ENSSFOG00015003298	ythdc1	60	84.419	ENSSTOG00000013652	YTHDC1	93	67.622	Ictidomys_tridecemlineatus
ENSSFOG00015003298	ythdc1	60	83.721	ENSJJAG00000010268	Ythdc1	93	67.941	Jaculus_jaculus
ENSSFOG00015003298	ythdc1	59	68.116	ENSKMAG00000006483	ythdc1	86	72.464	Kryptolebias_marmoratus
ENSSFOG00015003298	ythdc1	66	79.545	ENSLBEG00000020831	ythdc1	93	54.560	Labrus_bergylta
ENSSFOG00015003298	ythdc1	78	67.462	ENSLACG00000004893	YTHDC1	92	67.445	Latimeria_chalumnae
ENSSFOG00015003298	ythdc1	93	76.289	ENSLOCG00000003045	ythdc1	92	76.054	Lepisosteus_oculatus
ENSSFOG00015003298	ythdc1	93	66.667	ENSLAFG00000021592	YTHDC1	100	65.604	Loxodonta_africana
ENSSFOG00015003298	ythdc1	60	84.419	ENSMFAG00000031927	YTHDC1	96	66.793	Macaca_fascicularis
ENSSFOG00015003298	ythdc1	60	86.019	ENSMMUG00000002265	YTHDC1	93	68.169	Macaca_mulatta
ENSSFOG00015003298	ythdc1	60	86.019	ENSMNEG00000033751	YTHDC1	96	66.793	Macaca_nemestrina
ENSSFOG00015003298	ythdc1	60	86.019	ENSMLEG00000042147	YTHDC1	96	66.793	Mandrillus_leucophaeus
ENSSFOG00015003298	ythdc1	58	71.007	ENSMAMG00000013122	ythdc1	92	60.395	Mastacembelus_armatus
ENSSFOG00015003298	ythdc1	59	69.175	ENSMZEG00005023173	ythdc1	93	60.790	Maylandia_zebra
ENSSFOG00015003298	ythdc1	93	70.615	ENSMGAG00000010391	YTHDC1	92	70.615	Meleagris_gallopavo
ENSSFOG00015003298	ythdc1	60	84.186	ENSMAUG00000001286	Ythdc1	93	67.770	Mesocricetus_auratus
ENSSFOG00015003298	ythdc1	93	67.914	ENSMICG00000034640	YTHDC1	93	68.338	Microcebus_murinus
ENSSFOG00015003298	ythdc1	60	84.186	ENSMOCG00000020201	Ythdc1	93	66.955	Microtus_ochrogaster
ENSSFOG00015003298	ythdc1	75	52.941	ENSMODG00000010076	-	75	52.038	Monodelphis_domestica
ENSSFOG00015003298	ythdc1	51	57.593	ENSMODG00000004117	-	92	57.453	Monodelphis_domestica
ENSSFOG00015003298	ythdc1	66	54.915	ENSMODG00000009173	-	87	55.981	Monodelphis_domestica
ENSSFOG00015003298	ythdc1	97	49.394	ENSMODG00000014337	-	95	60.798	Monodelphis_domestica
ENSSFOG00015003298	ythdc1	93	70.544	ENSMODG00000020754	-	92	71.450	Monodelphis_domestica
ENSSFOG00015003298	ythdc1	50	77.843	ENSMALG00000013412	ythdc1	93	61.856	Monopterus_albus
ENSSFOG00015003298	ythdc1	60	85.545	MGP_CAROLIEiJ_G0027347	Ythdc1	93	68.261	Mus_caroli
ENSSFOG00015003298	ythdc1	93	67.391	ENSMUSG00000035851	Ythdc1	93	68.017	Mus_musculus
ENSSFOG00015003298	ythdc1	93	67.536	MGP_PahariEiJ_G0017126	Ythdc1	93	67.873	Mus_pahari
ENSSFOG00015003298	ythdc1	93	67.391	MGP_SPRETEiJ_G0028339	Ythdc1	93	68.017	Mus_spretus
ENSSFOG00015003298	ythdc1	66	86.889	ENSMPUG00000001743	YTHDC1	65	86.224	Mustela_putorius_furo
ENSSFOG00015003298	ythdc1	60	86.256	ENSMLUG00000016300	YTHDC1	92	69.231	Myotis_lucifugus
ENSSFOG00015003298	ythdc1	58	55.481	ENSNGAG00000024000	Ythdc1	93	57.047	Nannospalax_galili
ENSSFOG00015003298	ythdc1	59	67.488	ENSNBRG00000007663	ythdc1	86	62.288	Neolamprologus_brichardi
ENSSFOG00015003298	ythdc1	60	83.488	ENSNLEG00000009202	YTHDC1	96	66.160	Nomascus_leucogenys
ENSSFOG00015003298	ythdc1	72	72.078	ENSMEUG00000007128	YTHDC1	68	72.078	Notamacropus_eugenii
ENSSFOG00015003298	ythdc1	71	86.495	ENSOPRG00000008986	YTHDC1	66	86.364	Ochotona_princeps
ENSSFOG00015003298	ythdc1	60	85.071	ENSODEG00000001715	YTHDC1	93	68.467	Octodon_degus
ENSSFOG00015003298	ythdc1	59	69.660	ENSONIG00000012651	ythdc1	94	61.094	Oreochromis_niloticus
ENSSFOG00015003298	ythdc1	87	62.048	ENSOANG00000014398	YTHDC1	72	85.714	Ornithorhynchus_anatinus
ENSSFOG00015003298	ythdc1	93	63.478	ENSOCUG00000015886	YTHDC1	55	85.176	Oryctolagus_cuniculus
ENSSFOG00015003298	ythdc1	92	58.154	ENSORLG00000030544	ythdc1	94	61.633	Oryzias_latipes
ENSSFOG00015003298	ythdc1	92	57.757	ENSORLG00020019316	ythdc1	94	61.538	Oryzias_latipes_hni
ENSSFOG00015003298	ythdc1	59	70.244	ENSOMEG00000000551	ythdc1	94	60.429	Oryzias_melastigma
ENSSFOG00015003298	ythdc1	60	86.493	ENSOGAG00000003362	YTHDC1	93	69.287	Otolemur_garnettii
ENSSFOG00015003298	ythdc1	60	85.782	ENSOARG00000008633	YTHDC1	93	68.307	Ovis_aries
ENSSFOG00015003298	ythdc1	60	84.419	ENSPPAG00000041315	YTHDC1	97	66.603	Pan_paniscus
ENSSFOG00015003298	ythdc1	60	84.884	ENSPPRG00000011979	YTHDC1	93	68.240	Panthera_pardus
ENSSFOG00015003298	ythdc1	60	84.419	ENSPTIG00000015527	YTHDC1	93	68.070	Panthera_tigris_altaica
ENSSFOG00015003298	ythdc1	60	84.419	ENSPTRG00000016105	YTHDC1	97	66.603	Pan_troglodytes
ENSSFOG00015003298	ythdc1	60	84.419	ENSPANG00000021590	YTHDC1	96	66.792	Papio_anubis
ENSSFOG00015003298	ythdc1	93	79.790	ENSPKIG00000018497	ythdc1	93	80.539	Paramormyrops_kingsleyae
ENSSFOG00015003298	ythdc1	92	71.081	ENSPSIG00000002782	YTHDC1	92	71.081	Pelodiscus_sinensis
ENSSFOG00015003298	ythdc1	55	63.950	ENSPMGG00000000970	-	74	66.144	Periophthalmus_magnuspinnatus
ENSSFOG00015003298	ythdc1	60	85.782	ENSPEMG00000013850	Ythdc1	92	68.538	Peromyscus_maniculatus_bairdii
ENSSFOG00015003298	ythdc1	93	70.393	ENSPCIG00000006870	YTHDC1	92	71.299	Phascolarctos_cinereus
ENSSFOG00015003298	ythdc1	58	67.299	ENSPFOG00000013404	ythdc1	94	61.085	Poecilia_formosa
ENSSFOG00015003298	ythdc1	58	67.299	ENSPLAG00000011079	ythdc1	85	73.219	Poecilia_latipinna
ENSSFOG00015003298	ythdc1	58	67.299	ENSPMEG00000009238	ythdc1	94	61.240	Poecilia_mexicana
ENSSFOG00015003298	ythdc1	58	66.919	ENSPREG00000016973	ythdc1	93	56.577	Poecilia_reticulata
ENSSFOG00015003298	ythdc1	60	86.019	ENSPPYG00000014726	YTHDC1	87	73.262	Pongo_abelii
ENSSFOG00015003298	ythdc1	77	74.672	ENSPCAG00000009607	YTHDC1	77	71.983	Procavia_capensis
ENSSFOG00015003298	ythdc1	93	63.597	ENSPCOG00000019105	YTHDC1	92	64.040	Propithecus_coquereli
ENSSFOG00015003298	ythdc1	60	83.175	ENSPVAG00000015551	YTHDC1	93	66.570	Pteropus_vampyrus
ENSSFOG00015003298	ythdc1	59	69.175	ENSPNYG00000011687	ythdc1	94	60.790	Pundamilia_nyererei
ENSSFOG00015003298	ythdc1	93	78.539	ENSPNAG00000028365	ythdc1	93	79.136	Pygocentrus_nattereri
ENSSFOG00015003298	ythdc1	60	83.953	ENSRNOG00000001996	Ythdc1	93	67.335	Rattus_norvegicus
ENSSFOG00015003298	ythdc1	60	84.419	ENSRBIG00000028279	YTHDC1	96	66.414	Rhinopithecus_bieti
ENSSFOG00015003298	ythdc1	60	86.019	ENSRROG00000035028	YTHDC1	96	66.793	Rhinopithecus_roxellana
ENSSFOG00015003298	ythdc1	60	84.419	ENSSBOG00000022353	YTHDC1	96	66.793	Saimiri_boliviensis_boliviensis
ENSSFOG00015003298	ythdc1	93	70.091	ENSSHAG00000002538	YTHDC1	91	72.681	Sarcophilus_harrisii
ENSSFOG00015003298	ythdc1	58	68.171	ENSSMAG00000009086	ythdc1	94	60.310	Scophthalmus_maximus
ENSSFOG00015003298	ythdc1	58	71.182	ENSSDUG00000022008	ythdc1	94	61.890	Seriola_dumerili
ENSSFOG00015003298	ythdc1	58	71.182	ENSSLDG00000007926	ythdc1	94	62.195	Seriola_lalandi_dorsalis
ENSSFOG00015003298	ythdc1	60	85.782	ENSSARG00000010960	YTHDC1	89	76.527	Sorex_araneus
ENSSFOG00015003298	ythdc1	93	70.359	ENSSPUG00000009357	YTHDC1	97	69.665	Sphenodon_punctatus
ENSSFOG00015003298	ythdc1	59	70.146	ENSSPAG00000011449	ythdc1	94	59.789	Stegastes_partitus
ENSSFOG00015003298	ythdc1	60	86.256	ENSSSCG00000035505	YTHDC1	93	67.806	Sus_scrofa
ENSSFOG00015003298	ythdc1	93	70.765	ENSTGUG00000004452	-	92	70.765	Taeniopygia_guttata
ENSSFOG00015003298	ythdc1	66	79.487	ENSTRUG00000010142	ythdc1	70	79.487	Takifugu_rubripes
ENSSFOG00015003298	ythdc1	68	74.372	ENSTNIG00000013243	ythdc1	74	70.892	Tetraodon_nigroviridis
ENSSFOG00015003298	ythdc1	93	65.096	ENSTBEG00000011546	YTHDC1	92	65.685	Tupaia_belangeri
ENSSFOG00015003298	ythdc1	60	85.308	ENSTTRG00000005083	YTHDC1	93	68.360	Tursiops_truncatus
ENSSFOG00015003298	ythdc1	60	86.493	ENSUAMG00000010388	YTHDC1	91	69.025	Ursus_americanus
ENSSFOG00015003298	ythdc1	92	64.363	ENSUMAG00000013668	YTHDC1	90	64.670	Ursus_maritimus
ENSSFOG00015003298	ythdc1	93	65.552	ENSVPAG00000009040	YTHDC1	92	66.277	Vicugna_pacos
ENSSFOG00015003298	ythdc1	60	86.493	ENSVVUG00000005387	YTHDC1	94	66.176	Vulpes_vulpes
ENSSFOG00015003298	ythdc1	92	65.496	ENSXETG00000017960	ythdc1	91	66.613	Xenopus_tropicalis
ENSSFOG00015003298	ythdc1	53	55.797	ENSXCOG00000000530	ythdc1	83	60.714	Xiphophorus_couchianus
ENSSFOG00015003298	ythdc1	58	67.299	ENSXMAG00000005196	ythdc1	94	60.991	Xiphophorus_maculatus