EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015003371 (Gene tree)
Gene ID: -
Gene Symbol: polr2j
Alias: rpb11|zgc:110005
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 1604 bases
Position: chrKV410884.1:2028848-2030451
Accession: 108928135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015005130	RNA_pol_L_2	PF13656.6	5.1e-29	1	1
ENSSFOP00015005130	RNA_pol_L	PF01193.24	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015005215	-	1192	XM_018741915	ENSSFOP00015005130	132 (aa)	XP_018597431	-

Gene Model

Click here to download ENSSFOG00015003371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015003371	polr2j	72	35.714	ENSSFOG00015011375	polr1d	86	35.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003371	polr2j	83	94.495	ENSG00000005075	POLR2J	93	94.495	Homo_sapiens
ENSSFOG00015003371	polr2j	81	94.393	ENSG00000228049	POLR2J2	97	89.381	Homo_sapiens
ENSSFOG00015003371	polr2j	83	95.413	ENSAPOG00000019538	polr2j	93	95.413	Acanthochromis_polyacanthus
ENSSFOG00015003371	polr2j	86	92.920	ENSAMEG00000015480	-	89	92.920	Ailuropoda_melanoleuca
ENSSFOG00015003371	polr2j	86	70.435	ENSACIG00000014549	POLR2J2	96	70.435	Amphilophus_citrinellus
ENSSFOG00015003371	polr2j	83	94.495	ENSAOCG00000006937	polr2j	93	94.495	Amphiprion_ocellaris
ENSSFOG00015003371	polr2j	83	95.413	ENSAPEG00000021761	polr2j	93	95.413	Amphiprion_percula
ENSSFOG00015003371	polr2j	83	95.413	ENSATEG00000013312	-	93	95.413	Anabas_testudineus
ENSSFOG00015003371	polr2j	83	95.413	ENSATEG00000009731	polr2j	93	95.413	Anabas_testudineus
ENSSFOG00015003371	polr2j	70	91.398	ENSAPLG00000003744	-	92	91.398	Anas_platyrhynchos
ENSSFOG00015003371	polr2j	83	84.404	ENSACAG00000000251	POLR2J	93	84.404	Anolis_carolinensis
ENSSFOG00015003371	polr2j	83	95.413	ENSACLG00000014564	polr2j	93	95.413	Astatotilapia_calliptera
ENSSFOG00015003371	polr2j	83	97.248	ENSAMXG00000007517	polr2j	93	97.248	Astyanax_mexicanus
ENSSFOG00015003371	polr2j	55	65.753	ENSBTAG00000048046	-	61	65.753	Bos_taurus
ENSSFOG00015003371	polr2j	83	66.055	WBGene00012187	rpb-11	89	66.055	Caenorhabditis_elegans
ENSSFOG00015003371	polr2j	83	94.495	ENSCJAG00000016203	-	93	94.495	Callithrix_jacchus
ENSSFOG00015003371	polr2j	83	94.495	ENSCAFG00000013683	-	93	94.495	Canis_familiaris
ENSSFOG00015003371	polr2j	69	93.407	ENSTSYG00000029243	-	78	93.407	Carlito_syrichta
ENSSFOG00015003371	polr2j	83	94.495	ENSCPOG00000001401	-	93	94.495	Cavia_porcellus
ENSSFOG00015003371	polr2j	83	69.725	ENSCATG00000016595	-	87	80.723	Cercocebus_atys
ENSSFOG00015003371	polr2j	83	94.495	ENSCLAG00000005238	-	93	94.495	Chinchilla_lanigera
ENSSFOG00015003371	polr2j	83	94.495	ENSCSAG00000018092	-	93	94.495	Chlorocebus_sabaeus
ENSSFOG00015003371	polr2j	83	83.486	ENSCING00000020531	-	93	83.486	Ciona_intestinalis
ENSSFOG00015003371	polr2j	86	82.301	ENSCSAVG00000006948	-	96	82.301	Ciona_savignyi
ENSSFOG00015003371	polr2j	83	94.495	ENSCGRG00001012814	Polr2j	93	94.495	Cricetulus_griseus_chok1gshd
ENSSFOG00015003371	polr2j	83	78.899	ENSCGRG00000008433	Polr2j	93	78.899	Cricetulus_griseus_crigri
ENSSFOG00015003371	polr2j	83	92.661	ENSCSEG00000020352	polr2j	93	92.661	Cynoglossus_semilaevis
ENSSFOG00015003371	polr2j	83	95.413	ENSCVAG00000014267	polr2j	93	95.413	Cyprinodon_variegatus
ENSSFOG00015003371	polr2j	83	96.330	ENSDARG00000035146	polr2j	93	96.330	Danio_rerio
ENSSFOG00015003371	polr2j	83	94.495	ENSDORG00000005934	Polr2j	93	94.495	Dipodomys_ordii
ENSSFOG00015003371	polr2j	83	77.982	FBgn0032634	Rpb11	93	77.982	Drosophila_melanogaster
ENSSFOG00015003371	polr2j	83	61.468	ENSEBUG00000016100	polr2j	91	61.468	Eptatretus_burgeri
ENSSFOG00015003371	polr2j	83	94.495	ENSEASG00005016864	-	93	94.495	Equus_asinus_asinus
ENSSFOG00015003371	polr2j	83	97.248	ENSELUG00000012822	polr2j	93	97.248	Esox_lucius
ENSSFOG00015003371	polr2j	83	94.495	ENSFCAG00000000377	-	93	94.495	Felis_catus
ENSSFOG00015003371	polr2j	83	94.495	ENSFALG00000009523	POLR2J	93	94.495	Ficedula_albicollis
ENSSFOG00015003371	polr2j	83	94.495	ENSFDAG00000010507	-	93	94.495	Fukomys_damarensis
ENSSFOG00015003371	polr2j	83	95.413	ENSFHEG00000006625	polr2j	93	95.413	Fundulus_heteroclitus
ENSSFOG00015003371	polr2j	83	97.248	ENSGMOG00000018207	polr2j	93	97.248	Gadus_morhua
ENSSFOG00015003371	polr2j	83	94.495	ENSGALG00000030808	-	93	94.495	Gallus_gallus
ENSSFOG00015003371	polr2j	83	95.413	ENSGAFG00000019555	polr2j	93	95.413	Gambusia_affinis
ENSSFOG00015003371	polr2j	83	95.413	ENSGACG00000003310	polr2j	93	95.413	Gasterosteus_aculeatus
ENSSFOG00015003371	polr2j	80	83.810	ENSGAGG00000018304	-	89	83.810	Gopherus_agassizii
ENSSFOG00015003371	polr2j	70	89.130	ENSGGOG00000004519	-	74	89.130	Gorilla_gorilla
ENSSFOG00015003371	polr2j	83	95.413	ENSHBUG00000008467	polr2j	93	95.413	Haplochromis_burtoni
ENSSFOG00015003371	polr2j	83	94.495	ENSHGLG00000013598	POLR2J	97	96.262	Heterocephalus_glaber_female
ENSSFOG00015003371	polr2j	83	94.495	ENSHGLG00100011242	POLR2J	97	96.262	Heterocephalus_glaber_male
ENSSFOG00015003371	polr2j	83	95.413	ENSHCOG00000014827	polr2j	63	95.413	Hippocampus_comes
ENSSFOG00015003371	polr2j	83	97.248	ENSIPUG00000023960	polr2j	93	97.248	Ictalurus_punctatus
ENSSFOG00015003371	polr2j	83	94.495	ENSSTOG00000006377	POLR2J	96	96.262	Ictidomys_tridecemlineatus
ENSSFOG00015003371	polr2j	83	91.743	ENSJJAG00000018834	-	93	91.743	Jaculus_jaculus
ENSSFOG00015003371	polr2j	83	94.495	ENSJJAG00000013854	-	93	94.495	Jaculus_jaculus
ENSSFOG00015003371	polr2j	83	95.413	ENSKMAG00000014581	polr2j	73	95.413	Kryptolebias_marmoratus
ENSSFOG00015003371	polr2j	83	95.413	ENSLBEG00000005885	polr2j	93	95.413	Labrus_bergylta
ENSSFOG00015003371	polr2j	83	97.248	ENSLOCG00000001885	polr2j	83	97.248	Lepisosteus_oculatus
ENSSFOG00015003371	polr2j	83	94.495	ENSLAFG00000021507	-	93	94.495	Loxodonta_africana
ENSSFOG00015003371	polr2j	87	91.304	ENSMMUG00000012019	POLR2J	88	91.304	Macaca_mulatta
ENSSFOG00015003371	polr2j	83	95.413	ENSMAMG00000009374	polr2j	93	95.413	Mastacembelus_armatus
ENSSFOG00015003371	polr2j	83	95.413	ENSMZEG00005011932	polr2j	93	95.413	Maylandia_zebra
ENSSFOG00015003371	polr2j	83	94.495	ENSMGAG00000003534	POLR2J	93	94.495	Meleagris_gallopavo
ENSSFOG00015003371	polr2j	83	94.495	ENSMAUG00000013049	Polr2j	93	94.495	Mesocricetus_auratus
ENSSFOG00015003371	polr2j	74	86.735	ENSMICG00000026811	-	99	86.735	Microcebus_murinus
ENSSFOG00015003371	polr2j	83	94.495	ENSMOCG00000001294	Polr2j	93	94.495	Microtus_ochrogaster
ENSSFOG00015003371	polr2j	83	94.495	ENSMMOG00000013265	polr2j	93	94.495	Mola_mola
ENSSFOG00015003371	polr2j	86	92.035	ENSMODG00000013617	-	88	92.035	Monodelphis_domestica
ENSSFOG00015003371	polr2j	83	95.413	ENSMALG00000020749	polr2j	93	95.413	Monopterus_albus
ENSSFOG00015003371	polr2j	83	94.495	MGP_CAROLIEiJ_G0027851	Polr2j	96	96.262	Mus_caroli
ENSSFOG00015003371	polr2j	83	94.495	ENSMUSG00000039771	Polr2j	96	96.262	Mus_musculus
ENSSFOG00015003371	polr2j	83	94.495	MGP_PahariEiJ_G0024434	Polr2j	93	94.495	Mus_pahari
ENSSFOG00015003371	polr2j	83	94.495	MGP_SPRETEiJ_G0028853	Polr2j	96	96.262	Mus_spretus
ENSSFOG00015003371	polr2j	83	94.495	ENSMLUG00000010467	POLR2J	93	94.495	Myotis_lucifugus
ENSSFOG00015003371	polr2j	83	94.495	ENSNGAG00000023412	Polr2j	96	96.262	Nannospalax_galili
ENSSFOG00015003371	polr2j	58	94.805	ENSNBRG00000006580	polr2j	59	94.805	Neolamprologus_brichardi
ENSSFOG00015003371	polr2j	83	73.394	ENSODEG00000008559	-	93	73.394	Octodon_degus
ENSSFOG00015003371	polr2j	83	94.495	ENSODEG00000015648	-	96	96.262	Octodon_degus
ENSSFOG00015003371	polr2j	83	95.413	ENSONIG00000000259	polr2j	93	95.413	Oreochromis_niloticus
ENSSFOG00015003371	polr2j	83	91.743	ENSOANG00000020912	POLR2J	93	91.743	Ornithorhynchus_anatinus
ENSSFOG00015003371	polr2j	81	96.262	ENSOCUG00000023609	POLR2J	84	96.262	Oryctolagus_cuniculus
ENSSFOG00015003371	polr2j	83	95.413	ENSORLG00000029046	polr2j	77	95.413	Oryzias_latipes
ENSSFOG00015003371	polr2j	83	95.413	ENSORLG00020007625	polr2j	77	95.413	Oryzias_latipes_hni
ENSSFOG00015003371	polr2j	83	95.413	ENSORLG00015003457	polr2j	77	95.413	Oryzias_latipes_hsok
ENSSFOG00015003371	polr2j	83	94.495	ENSOMEG00000002097	polr2j	93	94.495	Oryzias_melastigma
ENSSFOG00015003371	polr2j	81	75.926	ENSOGAG00000008250	-	84	75.926	Otolemur_garnettii
ENSSFOG00015003371	polr2j	83	94.495	ENSOARG00000014204	-	91	94.495	Ovis_aries
ENSSFOG00015003371	polr2j	83	94.495	ENSPPRG00000012439	-	93	94.495	Panthera_pardus
ENSSFOG00015003371	polr2j	80	84.906	ENSPTIG00000018714	-	92	90.526	Panthera_tigris_altaica
ENSSFOG00015003371	polr2j	70	92.391	ENSPSIG00000010173	-	92	92.391	Pelodiscus_sinensis
ENSSFOG00015003371	polr2j	83	95.413	ENSPMGG00000021256	polr2j	93	95.413	Periophthalmus_magnuspinnatus
ENSSFOG00015003371	polr2j	83	94.495	ENSPEMG00000015733	Polr2j	93	94.495	Peromyscus_maniculatus_bairdii
ENSSFOG00015003371	polr2j	83	94.495	ENSPCIG00000009026	-	93	94.495	Phascolarctos_cinereus
ENSSFOG00015003371	polr2j	83	95.413	ENSPFOG00000012001	polr2j	92	95.413	Poecilia_formosa
ENSSFOG00015003371	polr2j	83	95.413	ENSPLAG00000014075	polr2j	93	95.413	Poecilia_latipinna
ENSSFOG00015003371	polr2j	83	95.413	ENSPMEG00000020585	polr2j	93	95.413	Poecilia_mexicana
ENSSFOG00015003371	polr2j	83	95.413	ENSPREG00000015255	polr2j	93	95.413	Poecilia_reticulata
ENSSFOG00015003371	polr2j	86	92.035	ENSPCOG00000024573	-	93	94.495	Propithecus_coquereli
ENSSFOG00015003371	polr2j	81	96.262	ENSPVAG00000017770	-	61	96.262	Pteropus_vampyrus
ENSSFOG00015003371	polr2j	83	95.413	ENSPNYG00000014832	polr2j	93	95.413	Pundamilia_nyererei
ENSSFOG00015003371	polr2j	86	93.805	ENSPNAG00000016595	polr2j	96	93.805	Pygocentrus_nattereri
ENSSFOG00015003371	polr2j	83	94.495	ENSRNOG00000001430	Polr2j	93	94.495	Rattus_norvegicus
ENSSFOG00015003371	polr2j	83	94.495	ENSSBOG00000025579	-	93	94.495	Saimiri_boliviensis_boliviensis
ENSSFOG00015003371	polr2j	83	95.413	ENSSMAG00000006729	polr2j	93	95.413	Scophthalmus_maximus
ENSSFOG00015003371	polr2j	83	95.413	ENSSDUG00000018490	polr2j	93	95.413	Seriola_dumerili
ENSSFOG00015003371	polr2j	83	95.413	ENSSLDG00000022354	polr2j	93	95.413	Seriola_lalandi_dorsalis
ENSSFOG00015003371	polr2j	83	94.495	ENSSPUG00000010802	-	93	94.495	Sphenodon_punctatus
ENSSFOG00015003371	polr2j	83	95.413	ENSSPAG00000021953	polr2j	93	95.413	Stegastes_partitus
ENSSFOG00015003371	polr2j	83	94.495	ENSSSCG00000007688	-	93	94.495	Sus_scrofa
ENSSFOG00015003371	polr2j	83	77.064	ENSSSCG00000003703	-	77	77.064	Sus_scrofa
ENSSFOG00015003371	polr2j	70	92.391	ENSTGUG00000004501	-	92	92.391	Taeniopygia_guttata
ENSSFOG00015003371	polr2j	83	95.413	ENSTRUG00000020842	polr2j	93	95.413	Takifugu_rubripes
ENSSFOG00015003371	polr2j	83	94.495	ENSTNIG00000002994	polr2j	93	94.495	Tetraodon_nigroviridis
ENSSFOG00015003371	polr2j	81	80.374	ENSTBEG00000005797	-	70	80.374	Tupaia_belangeri
ENSSFOG00015003371	polr2j	83	94.495	ENSUAMG00000011310	-	93	94.495	Ursus_americanus
ENSSFOG00015003371	polr2j	83	94.495	ENSUMAG00000012594	-	93	94.495	Ursus_maritimus
ENSSFOG00015003371	polr2j	83	93.578	ENSXETG00000001108	polr2j	93	93.578	Xenopus_tropicalis
ENSSFOG00015003371	polr2j	83	95.413	ENSXMAG00000012422	polr2j	93	95.413	Xiphophorus_maculatus