EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015003449 (Gene tree)
Gene ID: 108918708
Gene Symbol: cwc25
Alias: ccdc49|fc11a02|flj20291l|im:7140273|pate|pte|wu:fc11a02|zgc:55552
Full Name: CWC25 spliceosome associated protein homolog
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 8670 bases
Position: chrKV411256.1:1578582-1587251
Accession: 108918708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015005247	CWC25	PF12542.8	5.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015005334	-	2821	XM_018726190	ENSSFOP00015005247	381 (aa)	XP_018581706	A0A1W4Y0I4

Gene Model

Click here to download ENSSFOG00015003449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003449's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003449	cwc25	62	64.754	ENSAMEG00000004292	CWC25	100	52.804	Ailuropoda_melanoleuca
ENSSFOG00015003449	cwc25	100	61.097	ENSATEG00000000799	cwc25	100	60.911	Anabas_testudineus
ENSSFOG00015003449	cwc25	98	47.031	ENSAPLG00000003710	CWC25	99	47.857	Anas_platyrhynchos
ENSSFOG00015003449	cwc25	100	51.942	ENSACAG00000013140	CWC25	100	51.456	Anolis_carolinensis
ENSSFOG00015003449	cwc25	100	50.919	ENSANAG00000033550	CWC25	100	47.781	Aotus_nancymaae
ENSSFOG00015003449	cwc25	100	60.988	ENSACLG00000009352	cwc25	100	60.526	Astatotilapia_calliptera
ENSSFOG00015003449	cwc25	98	59.951	ENSAMXG00000035125	cwc25	100	63.990	Astyanax_mexicanus
ENSSFOG00015003449	cwc25	60	66.524	ENSBTAG00000030591	CWC25	86	74.825	Bos_taurus
ENSSFOG00015003449	cwc25	100	50.234	ENSCJAG00000008289	CWC25	100	51.402	Callithrix_jacchus
ENSSFOG00015003449	cwc25	100	53.991	ENSCAFG00000016561	CWC25	100	53.286	Canis_familiaris
ENSSFOG00015003449	cwc25	100	54.225	ENSCAFG00020023017	CWC25	100	53.286	Canis_lupus_dingo
ENSSFOG00015003449	cwc25	60	66.383	ENSCHIG00000015063	CWC25	100	53.023	Capra_hircus
ENSSFOG00015003449	cwc25	61	63.404	ENSCAPG00000014542	CWC25	99	51.529	Cavia_aperea
ENSSFOG00015003449	cwc25	100	53.623	ENSCPOG00000015127	CWC25	100	55.637	Cavia_porcellus
ENSSFOG00015003449	cwc25	100	51.628	ENSCSAG00000002654	CWC25	100	51.529	Chlorocebus_sabaeus
ENSSFOG00015003449	cwc25	98	51.537	ENSCPBG00000027490	CWC25	88	51.781	Chrysemys_picta_bellii
ENSSFOG00015003449	cwc25	100	56.311	ENSCSEG00000016305	cwc25	100	59.360	Cynoglossus_semilaevis
ENSSFOG00015003449	cwc25	100	58.738	ENSCVAG00000007828	cwc25	100	61.179	Cyprinodon_variegatus
ENSSFOG00015003449	cwc25	100	62.255	ENSDARG00000003382	cwc25	100	64.411	Danio_rerio
ENSSFOG00015003449	cwc25	100	47.118	ENSEBUG00000002947	cwc25	100	47.118	Eptatretus_burgeri
ENSSFOG00015003449	cwc25	100	60.048	ENSELUG00000009127	cwc25	100	61.779	Esox_lucius
ENSSFOG00015003449	cwc25	100	51.951	ENSFDAG00000007745	CWC25	100	54.988	Fukomys_damarensis
ENSSFOG00015003449	cwc25	100	58.293	ENSFHEG00000004754	cwc25	100	61.071	Fundulus_heteroclitus
ENSSFOG00015003449	cwc25	66	83.544	ENSGMOG00000013001	cwc25	67	83.133	Gadus_morhua
ENSSFOG00015003449	cwc25	100	51.306	ENSGALG00000001624	CWC25	100	50.597	Gallus_gallus
ENSSFOG00015003449	cwc25	100	58.234	ENSGAFG00000007492	cwc25	100	60.934	Gambusia_affinis
ENSSFOG00015003449	cwc25	100	52.719	ENSGAGG00000022972	CWC25	100	51.887	Gopherus_agassizii
ENSSFOG00015003449	cwc25	100	59.662	ENSHBUG00000001392	cwc25	100	60.432	Haplochromis_burtoni
ENSSFOG00015003449	cwc25	100	53.012	ENSHGLG00000014785	CWC25	100	53.012	Heterocephalus_glaber_female
ENSSFOG00015003449	cwc25	100	52.123	ENSHGLG00100017354	CWC25	100	52.471	Heterocephalus_glaber_male
ENSSFOG00015003449	cwc25	100	57.767	ENSHCOG00000002434	cwc25	100	59.466	Hippocampus_comes
ENSSFOG00015003449	cwc25	100	61.084	ENSIPUG00000012581	CWC25	100	62.785	Ictalurus_punctatus
ENSSFOG00015003449	cwc25	100	51.843	ENSSTOG00000014268	CWC25	100	52.887	Ictidomys_tridecemlineatus
ENSSFOG00015003449	cwc25	100	61.845	ENSKMAG00000015418	cwc25	99	61.905	Kryptolebias_marmoratus
ENSSFOG00015003449	cwc25	83	42.547	ENSLACG00000001743	CWC25	100	42.424	Latimeria_chalumnae
ENSSFOG00015003449	cwc25	100	59.653	ENSMAMG00000005194	cwc25	100	60.660	Mastacembelus_armatus
ENSSFOG00015003449	cwc25	100	60.988	ENSMZEG00005012421	cwc25	100	60.526	Maylandia_zebra
ENSSFOG00015003449	cwc25	99	49.880	ENSMGAG00000005158	CWC25	99	50.238	Meleagris_gallopavo
ENSSFOG00015003449	cwc25	100	50.355	ENSMODG00000012627	CWC25	100	52.153	Monodelphis_domestica
ENSSFOG00015003449	cwc25	100	58.780	ENSMALG00000005638	cwc25	100	60.247	Monopterus_albus
ENSSFOG00015003449	cwc25	100	53.207	MGP_CAROLIEiJ_G0017064	Cwc25	100	53.222	Mus_caroli
ENSSFOG00015003449	cwc25	62	64.854	ENSMPUG00000015077	CWC25	100	53.052	Mustela_putorius_furo
ENSSFOG00015003449	cwc25	100	52.668	ENSNGAG00000007394	Cwc25	100	53.412	Nannospalax_galili
ENSSFOG00015003449	cwc25	100	53.960	ENSODEG00000017487	CWC25	100	55.693	Octodon_degus
ENSSFOG00015003449	cwc25	100	57.921	ENSONIG00000003251	cwc25	100	61.369	Oreochromis_niloticus
ENSSFOG00015003449	cwc25	100	59.898	ENSORLG00000018569	cwc25	100	61.125	Oryzias_latipes
ENSSFOG00015003449	cwc25	100	59.744	ENSORLG00020012087	cwc25	100	61.125	Oryzias_latipes_hni
ENSSFOG00015003449	cwc25	100	59.645	ENSORLG00015011062	cwc25	100	60.870	Oryzias_latipes_hsok
ENSSFOG00015003449	cwc25	100	61.480	ENSOMEG00000019365	cwc25	100	61.381	Oryzias_melastigma
ENSSFOG00015003449	cwc25	100	52.020	ENSOGAG00000008785	CWC25	100	52.130	Otolemur_garnettii
ENSSFOG00015003449	cwc25	60	65.546	ENSPTRG00000009077	CWC25	100	52.326	Pan_troglodytes
ENSSFOG00015003449	cwc25	100	65.491	ENSPKIG00000007116	cwc25	100	65.909	Paramormyrops_kingsleyae
ENSSFOG00015003449	cwc25	100	53.207	ENSPCIG00000002943	CWC25	100	51.765	Phascolarctos_cinereus
ENSSFOG00015003449	cwc25	100	59.512	ENSPFOG00000017152	cwc25	100	61.916	Poecilia_formosa
ENSSFOG00015003449	cwc25	96	58.838	ENSPLAG00000004535	cwc25	100	60.358	Poecilia_latipinna
ENSSFOG00015003449	cwc25	100	59.268	ENSPMEG00000023752	cwc25	100	61.671	Poecilia_mexicana
ENSSFOG00015003449	cwc25	100	60.097	ENSPNAG00000028668	cwc25	100	60.341	Pygocentrus_nattereri
ENSSFOG00015003449	cwc25	100	53.318	ENSRNOG00000004091	Cwc25	100	54.436	Rattus_norvegicus
ENSSFOG00015003449	cwc25	100	52.632	ENSSHAG00000017267	CWC25	100	52.844	Sarcophilus_harrisii
ENSSFOG00015003449	cwc25	100	58.128	ENSSMAG00000010953	cwc25	100	60.546	Scophthalmus_maximus
ENSSFOG00015003449	cwc25	100	58.554	ENSSDUG00000004302	cwc25	100	61.125	Seriola_dumerili
ENSSFOG00015003449	cwc25	100	58.072	ENSSLDG00000005761	cwc25	100	60.636	Seriola_lalandi_dorsalis
ENSSFOG00015003449	cwc25	100	53.428	ENSSPUG00000018024	CWC25	100	53.555	Sphenodon_punctatus
ENSSFOG00015003449	cwc25	100	54.660	ENSSSCG00000021478	CWC25	100	55.000	Sus_scrofa
ENSSFOG00015003449	cwc25	98	49.176	ENSTGUG00000003011	CWC25	100	49.169	Taeniopygia_guttata
ENSSFOG00015003449	cwc25	100	60.250	ENSTRUG00000004650	cwc25	100	60.294	Takifugu_rubripes
ENSSFOG00015003449	cwc25	100	60.567	ENSTNIG00000014143	cwc25	100	61.598	Tetraodon_nigroviridis
ENSSFOG00015003449	cwc25	67	74.375	ENSTBEG00000013187	CWC25	61	74.375	Tupaia_belangeri
ENSSFOG00015003449	cwc25	98	51.282	ENSTTRG00000006662	CWC25	100	51.515	Tursiops_truncatus
ENSSFOG00015003449	cwc25	62	64.754	ENSUAMG00000005592	CWC25	100	52.093	Ursus_americanus
ENSSFOG00015003449	cwc25	62	64.754	ENSUMAG00000017097	CWC25	100	52.093	Ursus_maritimus
ENSSFOG00015003449	cwc25	66	74.843	ENSVPAG00000005680	CWC25	61	74.843	Vicugna_pacos
ENSSFOG00015003449	cwc25	100	53.991	ENSVVUG00000002182	CWC25	100	53.664	Vulpes_vulpes
ENSSFOG00015003449	cwc25	98	58.182	ENSXETG00000023722	cwc25	100	60.000	Xenopus_tropicalis
ENSSFOG00015003449	cwc25	100	59.950	ENSXMAG00000018113	cwc25	100	61.463	Xiphophorus_maculatus