EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015003463 (Gene tree)
Gene ID: 108921876
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5662 bases
Position: chrKV410808.1:2077157-2082818
Accession: 108921876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015005273	PseudoU_synth_1	PF01416.20	5.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015005360	-	2029	XM_018731594	ENSSFOP00015005273	438 (aa)	XP_018587110	A0A1W4YF98

Gene Model

Click here to download ENSSFOG00015003463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003463's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003463	pus1	84	72.826	ENSG00000177192	PUS1	95	72.826	Homo_sapiens
ENSSFOG00015003463	pus1	88	69.767	ENSAPOG00000007254	pus1	89	70.933	Acanthochromis_polyacanthus
ENSSFOG00015003463	pus1	82	72.145	ENSAMEG00000013715	PUS1	85	74.212	Ailuropoda_melanoleuca
ENSSFOG00015003463	pus1	97	63.615	ENSACIG00000009169	pus1	96	64.964	Amphilophus_citrinellus
ENSSFOG00015003463	pus1	88	70.801	ENSAOCG00000022207	pus1	89	72.000	Amphiprion_ocellaris
ENSSFOG00015003463	pus1	88	70.801	ENSAPEG00000006039	pus1	95	72.000	Amphiprion_percula
ENSSFOG00015003463	pus1	87	68.848	ENSATEG00000020688	pus1	94	70.000	Anabas_testudineus
ENSSFOG00015003463	pus1	85	70.588	ENSACAG00000007367	PUS1	99	70.588	Anolis_carolinensis
ENSSFOG00015003463	pus1	70	77.377	ENSANAG00000036192	PUS1	94	77.377	Aotus_nancymaae
ENSSFOG00015003463	pus1	87	68.848	ENSACLG00000020868	pus1	95	69.811	Astatotilapia_calliptera
ENSSFOG00015003463	pus1	87	73.560	ENSAMXG00000008710	pus1	84	74.659	Astyanax_mexicanus
ENSSFOG00015003463	pus1	82	71.038	ENSBTAG00000012990	PUS1	86	73.333	Bos_taurus
ENSSFOG00015003463	pus1	73	40.361	WBGene00004248	pus-1	79	40.361	Caenorhabditis_elegans
ENSSFOG00015003463	pus1	58	74.308	ENSCJAG00000003720	PUS1	71	73.846	Callithrix_jacchus
ENSSFOG00015003463	pus1	83	71.507	ENSCAFG00000006429	PUS1	86	74.561	Canis_familiaris
ENSSFOG00015003463	pus1	78	74.561	ENSCAFG00020010737	PUS1	79	74.561	Canis_lupus_dingo
ENSSFOG00015003463	pus1	82	71.038	ENSCHIG00000000487	PUS1	86	73.333	Capra_hircus
ENSSFOG00015003463	pus1	77	76.190	ENSTSYG00000032605	PUS1	92	75.802	Carlito_syrichta
ENSSFOG00015003463	pus1	68	77.517	ENSCAPG00000006421	PUS1	96	76.129	Cavia_aperea
ENSSFOG00015003463	pus1	87	70.789	ENSCPOG00000001027	PUS1	95	65.574	Cavia_porcellus
ENSSFOG00015003463	pus1	85	71.809	ENSCCAG00000015879	PUS1	85	77.524	Cebus_capucinus
ENSSFOG00015003463	pus1	85	72.751	ENSCATG00000032870	PUS1	84	77.524	Cercocebus_atys
ENSSFOG00015003463	pus1	100	64.465	ENSCLAG00000011689	PUS1	82	73.926	Chinchilla_lanigera
ENSSFOG00015003463	pus1	85	71.958	ENSCSAG00000001879	PUS1	83	74.510	Chlorocebus_sabaeus
ENSSFOG00015003463	pus1	71	76.038	ENSCPBG00000024715	PUS1	89	76.038	Chrysemys_picta_bellii
ENSSFOG00015003463	pus1	77	45.058	ENSCING00000009426	-	87	46.012	Ciona_intestinalis
ENSSFOG00015003463	pus1	74	44.479	ENSCSAVG00000003751	-	67	44.479	Ciona_savignyi
ENSSFOG00015003463	pus1	82	66.106	ENSCANG00000035561	PUS1	84	69.677	Colobus_angolensis_palliatus
ENSSFOG00015003463	pus1	82	73.370	ENSCGRG00001019592	Pus1	81	76.301	Cricetulus_griseus_chok1gshd
ENSSFOG00015003463	pus1	82	73.370	ENSCGRG00000004048	Pus1	87	76.301	Cricetulus_griseus_crigri
ENSSFOG00015003463	pus1	83	70.685	ENSCSEG00000003629	pus1	82	72.334	Cynoglossus_semilaevis
ENSSFOG00015003463	pus1	83	72.404	ENSCVAG00000001265	pus1	85	74.011	Cyprinodon_variegatus
ENSSFOG00015003463	pus1	87	68.750	ENSDARG00000045562	pus1	98	72.527	Danio_rerio
ENSSFOG00015003463	pus1	76	75.529	ENSDNOG00000045576	PUS1	95	74.434	Dasypus_novemcinctus
ENSSFOG00015003463	pus1	74	74.303	ENSDORG00000011455	Pus1	93	78.477	Dipodomys_ordii
ENSSFOG00015003463	pus1	99	40.980	FBgn0038811	PUS1	95	40.835	Drosophila_melanogaster
ENSSFOG00015003463	pus1	77	74.405	ENSETEG00000019160	PUS1	83	73.761	Echinops_telfairi
ENSSFOG00015003463	pus1	77	43.213	ENSEBUG00000000368	-	67	43.213	Eptatretus_burgeri
ENSSFOG00015003463	pus1	82	73.407	ENSEASG00005016535	PUS1	79	75.802	Equus_asinus_asinus
ENSSFOG00015003463	pus1	81	74.221	ENSECAG00000006965	PUS1	86	75.802	Equus_caballus
ENSSFOG00015003463	pus1	87	74.869	ENSELUG00000010424	pus1	92	76.309	Esox_lucius
ENSSFOG00015003463	pus1	82	71.667	ENSFCAG00000010780	PUS1	82	73.913	Felis_catus
ENSSFOG00015003463	pus1	84	73.118	ENSFALG00000008273	PUS1	82	75.783	Ficedula_albicollis
ENSSFOG00015003463	pus1	85	71.316	ENSFDAG00000012518	PUS1	89	70.789	Fukomys_damarensis
ENSSFOG00015003463	pus1	94	66.908	ENSFHEG00000010504	pus1	94	68.238	Fundulus_heteroclitus
ENSSFOG00015003463	pus1	79	71.839	ENSGMOG00000008143	pus1	88	72.174	Gadus_morhua
ENSSFOG00015003463	pus1	86	69.474	ENSGALG00000002354	PUS1	87	72.269	Gallus_gallus
ENSSFOG00015003463	pus1	93	67.482	ENSGAFG00000006578	pus1	93	68.766	Gambusia_affinis
ENSSFOG00015003463	pus1	90	66.176	ENSGACG00000017566	pus1	95	67.989	Gasterosteus_aculeatus
ENSSFOG00015003463	pus1	74	74.233	ENSGAGG00000016730	-	90	76.038	Gopherus_agassizii
ENSSFOG00015003463	pus1	82	75.350	ENSGGOG00000009178	PUS1	82	78.176	Gorilla_gorilla
ENSSFOG00015003463	pus1	87	69.372	ENSHBUG00000001316	pus1	94	70.270	Haplochromis_burtoni
ENSSFOG00015003463	pus1	81	71.067	ENSHGLG00000016086	PUS1	91	71.067	Heterocephalus_glaber_female
ENSSFOG00015003463	pus1	81	70.787	ENSHGLG00100019362	PUS1	91	70.787	Heterocephalus_glaber_male
ENSSFOG00015003463	pus1	94	64.439	ENSHCOG00000014288	pus1	92	64.439	Hippocampus_comes
ENSSFOG00015003463	pus1	83	76.584	ENSIPUG00000010387	pus1	86	78.098	Ictalurus_punctatus
ENSSFOG00015003463	pus1	82	74.860	ENSSTOG00000011245	PUS1	83	74.860	Ictidomys_tridecemlineatus
ENSSFOG00015003463	pus1	82	73.641	ENSJJAG00000000088	Pus1	81	76.590	Jaculus_jaculus
ENSSFOG00015003463	pus1	87	70.419	ENSKMAG00000012702	pus1	88	71.351	Kryptolebias_marmoratus
ENSSFOG00015003463	pus1	86	69.129	ENSLBEG00000002845	pus1	90	70.572	Labrus_bergylta
ENSSFOG00015003463	pus1	83	71.858	ENSLACG00000018598	PUS1	91	71.858	Latimeria_chalumnae
ENSSFOG00015003463	pus1	73	59.434	ENSLACG00000016044	-	97	58.879	Latimeria_chalumnae
ENSSFOG00015003463	pus1	91	75.879	ENSLOCG00000006127	pus1	97	77.083	Lepisosteus_oculatus
ENSSFOG00015003463	pus1	82	69.041	ENSLAFG00000028731	PUS1	91	72.353	Loxodonta_africana
ENSSFOG00015003463	pus1	85	72.222	ENSMFAG00000041194	PUS1	88	74.230	Macaca_fascicularis
ENSSFOG00015003463	pus1	84	73.297	ENSMMUG00000031463	PUS1	91	74.510	Macaca_mulatta
ENSSFOG00015003463	pus1	85	72.487	ENSMNEG00000002814	PUS1	84	77.199	Macaca_nemestrina
ENSSFOG00015003463	pus1	74	74.695	ENSMLEG00000043560	PUS1	94	77.377	Mandrillus_leucophaeus
ENSSFOG00015003463	pus1	87	69.372	ENSMAMG00000007371	pus1	87	70.541	Mastacembelus_armatus
ENSSFOG00015003463	pus1	87	69.110	ENSMZEG00005017746	pus1	87	70.000	Maylandia_zebra
ENSSFOG00015003463	pus1	74	73.994	ENSMGAG00000001958	PUS1	92	76.974	Meleagris_gallopavo
ENSSFOG00015003463	pus1	82	73.641	ENSMAUG00000001482	Pus1	81	76.590	Mesocricetus_auratus
ENSSFOG00015003463	pus1	79	76.000	ENSMICG00000030980	PUS1	88	74.581	Microcebus_murinus
ENSSFOG00015003463	pus1	83	73.585	ENSMOCG00000022311	Pus1	82	76.504	Microtus_ochrogaster
ENSSFOG00015003463	pus1	84	67.363	ENSMMOG00000021022	pus1	97	67.810	Mola_mola
ENSSFOG00015003463	pus1	78	73.066	ENSMODG00000015551	PUS1	93	64.439	Monodelphis_domestica
ENSSFOG00015003463	pus1	88	69.091	ENSMALG00000013202	pus1	89	70.133	Monopterus_albus
ENSSFOG00015003463	pus1	82	73.626	MGP_CAROLIEiJ_G0027551	Pus1	92	73.626	Mus_caroli
ENSSFOG00015003463	pus1	82	73.626	ENSMUSG00000029507	Pus1	92	73.626	Mus_musculus
ENSSFOG00015003463	pus1	82	73.626	MGP_PahariEiJ_G0024133	Pus1	92	73.626	Mus_pahari
ENSSFOG00015003463	pus1	82	73.626	MGP_SPRETEiJ_G0028549	Pus1	92	73.626	Mus_spretus
ENSSFOG00015003463	pus1	78	74.636	ENSMPUG00000002314	PUS1	83	77.134	Mustela_putorius_furo
ENSSFOG00015003463	pus1	79	73.256	ENSMLUG00000015790	PUS1	90	75.305	Myotis_lucifugus
ENSSFOG00015003463	pus1	79	77.168	ENSNGAG00000012976	Pus1	81	77.168	Nannospalax_galili
ENSSFOG00015003463	pus1	86	69.681	ENSNBRG00000020502	pus1	96	72.067	Neolamprologus_brichardi
ENSSFOG00015003463	pus1	82	71.989	ENSNLEG00000008505	PUS1	93	76.689	Nomascus_leucogenys
ENSSFOG00015003463	pus1	77	67.160	ENSMEUG00000002825	PUS1	90	67.160	Notamacropus_eugenii
ENSSFOG00015003463	pus1	83	64.865	ENSOPRG00000002701	-	97	64.865	Ochotona_princeps
ENSSFOG00015003463	pus1	82	73.204	ENSODEG00000008248	PUS1	90	75.219	Octodon_degus
ENSSFOG00015003463	pus1	87	67.700	ENSONIG00000003803	pus1	94	68.533	Oreochromis_niloticus
ENSSFOG00015003463	pus1	84	71.081	ENSOANG00000010619	PUS1	85	70.811	Ornithorhynchus_anatinus
ENSSFOG00015003463	pus1	75	77.982	ENSOCUG00000007310	PUS1	73	77.246	Oryctolagus_cuniculus
ENSSFOG00015003463	pus1	84	71.237	ENSORLG00000010787	pus1	86	72.299	Oryzias_latipes
ENSSFOG00015003463	pus1	84	71.698	ENSORLG00020011483	pus1	86	73.056	Oryzias_latipes_hni
ENSSFOG00015003463	pus1	84	72.312	ENSORLG00015023012	pus1	92	73.407	Oryzias_latipes_hsok
ENSSFOG00015003463	pus1	90	69.444	ENSOMEG00000022655	pus1	89	69.720	Oryzias_melastigma
ENSSFOG00015003463	pus1	79	75.862	ENSOGAG00000008720	PUS1	91	75.493	Otolemur_garnettii
ENSSFOG00015003463	pus1	82	71.038	ENSOARG00000013316	PUS1	80	73.333	Ovis_aries
ENSSFOG00015003463	pus1	94	66.746	ENSPPAG00000040971	PUS1	93	66.746	Pan_paniscus
ENSSFOG00015003463	pus1	79	73.913	ENSPPRG00000015456	PUS1	88	73.913	Panthera_pardus
ENSSFOG00015003463	pus1	77	74.041	ENSPTIG00000004201	PUS1	90	73.913	Panthera_tigris_altaica
ENSSFOG00015003463	pus1	84	72.283	ENSPTRG00000005643	PUS1	82	76.873	Pan_troglodytes
ENSSFOG00015003463	pus1	85	72.222	ENSPANG00000000376	PUS1	84	76.873	Papio_anubis
ENSSFOG00015003463	pus1	100	74.324	ENSPKIG00000019369	pus1	96	75.352	Paramormyrops_kingsleyae
ENSSFOG00015003463	pus1	83	72.099	ENSPSIG00000016432	PUS1	84	72.099	Pelodiscus_sinensis
ENSSFOG00015003463	pus1	86	67.989	ENSPMGG00000004522	pus1	97	67.989	Periophthalmus_magnuspinnatus
ENSSFOG00015003463	pus1	82	73.699	ENSPEMG00000013448	Pus1	81	76.676	Peromyscus_maniculatus_bairdii
ENSSFOG00015003463	pus1	74	60.185	ENSPMAG00000004636	pus1	98	60.185	Petromyzon_marinus
ENSSFOG00015003463	pus1	68	65.000	ENSPCIG00000022609	-	71	65.000	Phascolarctos_cinereus
ENSSFOG00015003463	pus1	93	67.237	ENSPFOG00000019669	pus1	93	68.262	Poecilia_formosa
ENSSFOG00015003463	pus1	93	66.993	ENSPLAG00000007185	pus1	93	68.010	Poecilia_latipinna
ENSSFOG00015003463	pus1	93	66.993	ENSPLAG00000002692	-	93	68.010	Poecilia_latipinna
ENSSFOG00015003463	pus1	93	67.237	ENSPMEG00000011115	PUS1	94	68.342	Poecilia_mexicana
ENSSFOG00015003463	pus1	95	66.346	ENSPMEG00000006038	pus1	98	67.327	Poecilia_mexicana
ENSSFOG00015003463	pus1	95	66.268	ENSPREG00000007231	pus1	97	72.376	Poecilia_reticulata
ENSSFOG00015003463	pus1	82	74.790	ENSPPYG00000005132	PUS1	83	74.790	Pongo_abelii
ENSSFOG00015003463	pus1	58	69.412	ENSPCAG00000009110	-	62	69.412	Procavia_capensis
ENSSFOG00015003463	pus1	89	63.427	ENSPCOG00000015595	PUS1	96	63.591	Propithecus_coquereli
ENSSFOG00015003463	pus1	87	69.110	ENSPNYG00000013571	pus1	87	70.000	Pundamilia_nyererei
ENSSFOG00015003463	pus1	94	71.186	ENSPNAG00000003938	pus1	92	72.613	Pygocentrus_nattereri
ENSSFOG00015003463	pus1	82	73.077	ENSRNOG00000037500	Pus1	85	73.077	Rattus_norvegicus
ENSSFOG00015003463	pus1	82	74.230	ENSRBIG00000043177	PUS1	89	74.230	Rhinopithecus_bieti
ENSSFOG00015003463	pus1	82	73.669	ENSRROG00000039744	PUS1	83	75.618	Rhinopithecus_roxellana
ENSSFOG00015003463	pus1	79	42.763	YPL212C	-	67	38.462	Saccharomyces_cerevisiae
ENSSFOG00015003463	pus1	81	75.141	ENSSBOG00000023593	PUS1	86	77.741	Saimiri_boliviensis_boliviensis
ENSSFOG00015003463	pus1	85	70.370	ENSSHAG00000013193	PUS1	91	70.370	Sarcophilus_harrisii
ENSSFOG00015003463	pus1	82	70.360	ENSSMAG00000019075	pus1	88	66.753	Scophthalmus_maximus
ENSSFOG00015003463	pus1	87	69.110	ENSSDUG00000007102	pus1	87	70.000	Seriola_dumerili
ENSSFOG00015003463	pus1	87	69.110	ENSSLDG00000022850	pus1	87	70.000	Seriola_lalandi_dorsalis
ENSSFOG00015003463	pus1	69	66.887	ENSSARG00000008367	PUS1	98	66.887	Sorex_araneus
ENSSFOG00015003463	pus1	91	68.262	ENSSPUG00000010009	PUS1	93	69.737	Sphenodon_punctatus
ENSSFOG00015003463	pus1	87	68.063	ENSSPAG00000006272	pus1	94	69.003	Stegastes_partitus
ENSSFOG00015003463	pus1	82	72.404	ENSSSCG00000009741	PUS1	86	75.072	Sus_scrofa
ENSSFOG00015003463	pus1	75	77.370	ENSTGUG00000008068	PUS1	99	77.370	Taeniopygia_guttata
ENSSFOG00015003463	pus1	80	72.316	ENSTRUG00000002198	pus1	90	72.316	Takifugu_rubripes
ENSSFOG00015003463	pus1	84	69.129	ENSTNIG00000003942	pus1	90	71.389	Tetraodon_nigroviridis
ENSSFOG00015003463	pus1	78	73.761	ENSTTRG00000000632	PUS1	81	73.761	Tursiops_truncatus
ENSSFOG00015003463	pus1	84	71.582	ENSUAMG00000017197	PUS1	89	73.743	Ursus_americanus
ENSSFOG00015003463	pus1	83	72.283	ENSUMAG00000002831	PUS1	95	77.287	Ursus_maritimus
ENSSFOG00015003463	pus1	78	74.780	ENSVVUG00000004199	PUS1	78	74.780	Vulpes_vulpes
ENSSFOG00015003463	pus1	73	49.533	ENSXETG00000033640	-	100	49.533	Xenopus_tropicalis
ENSSFOG00015003463	pus1	83	69.399	ENSXETG00000002030	pus1	87	71.186	Xenopus_tropicalis
ENSSFOG00015003463	pus1	94	67.153	ENSXCOG00000004722	pus1	96	70.942	Xiphophorus_couchianus
ENSSFOG00015003463	pus1	93	67.237	ENSXMAG00000000988	pus1	93	68.514	Xiphophorus_maculatus