EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015003468 (Gene tree)
Gene ID: 108929781
Gene Symbol: pde12
Alias: fc58c05|fi42f03|wu:fc58c05|wu:fi42f03|zgc:136374
Full Name: phosphodiesterase 12
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 3065 bases
Position: chrKV410904.1:1327168-1330232
Accession: 108929781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015005293	Exo_endo_phos	PF03372.23	5.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015005380	-	1596	XM_018744550	ENSSFOP00015005293	531 (aa)	XP_018600066	-

Gene Model

Click here to download ENSSFOG00015003468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015003468	pde12	58	30.199	ENSSFOG00015015133	CNOT6	63	30.141

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003468	pde12	93	64.776	ENSG00000174840	PDE12	84	64.776	Homo_sapiens
ENSSFOG00015003468	pde12	96	60.000	ENSAPOG00000018806	pde12	94	60.000	Acanthochromis_polyacanthus
ENSSFOG00015003468	pde12	88	62.687	ENSAMEG00000011802	PDE12	85	62.874	Ailuropoda_melanoleuca
ENSSFOG00015003468	pde12	89	65.385	ENSACIG00000014918	pde12	81	65.385	Amphilophus_citrinellus
ENSSFOG00015003468	pde12	96	60.048	ENSAOCG00000016376	pde12	96	60.048	Amphiprion_ocellaris
ENSSFOG00015003468	pde12	94	67.857	ENSAPEG00000000756	pde12	97	60.048	Amphiprion_percula
ENSSFOG00015003468	pde12	91	67.857	ENSATEG00000003072	pde12	85	67.857	Anabas_testudineus
ENSSFOG00015003468	pde12	87	65.680	ENSACAG00000003067	PDE12	82	65.680	Anolis_carolinensis
ENSSFOG00015003468	pde12	93	63.881	ENSANAG00000011815	PDE12	84	63.881	Aotus_nancymaae
ENSSFOG00015003468	pde12	87	66.369	ENSACLG00000010127	pde12	80	66.369	Astatotilapia_calliptera
ENSSFOG00015003468	pde12	89	73.810	ENSAMXG00000020765	pde12	80	73.810	Astyanax_mexicanus
ENSSFOG00015003468	pde12	88	63.284	ENSBTAG00000015563	PDE12	79	63.284	Bos_taurus
ENSSFOG00015003468	pde12	93	64.776	ENSCJAG00000019905	PDE12	84	64.776	Callithrix_jacchus
ENSSFOG00015003468	pde12	87	63.284	ENSCAFG00000007792	PDE12	79	63.284	Canis_familiaris
ENSSFOG00015003468	pde12	87	63.284	ENSCAFG00020006692	PDE12	79	63.284	Canis_lupus_dingo
ENSSFOG00015003468	pde12	88	63.284	ENSCHIG00000014202	PDE12	80	63.284	Capra_hircus
ENSSFOG00015003468	pde12	87	63.284	ENSTSYG00000025750	PDE12	81	63.284	Carlito_syrichta
ENSSFOG00015003468	pde12	88	65.373	ENSCPOG00000001620	PDE12	80	65.373	Cavia_porcellus
ENSSFOG00015003468	pde12	93	51.045	ENSCCAG00000031290	PDE12	83	51.045	Cebus_capucinus
ENSSFOG00015003468	pde12	88	64.776	ENSCATG00000044539	PDE12	79	64.776	Cercocebus_atys
ENSSFOG00015003468	pde12	91	63.690	ENSCLAG00000004864	PDE12	84	63.690	Chinchilla_lanigera
ENSSFOG00015003468	pde12	88	64.478	ENSCSAG00000012275	PDE12	80	64.478	Chlorocebus_sabaeus
ENSSFOG00015003468	pde12	63	64.179	ENSCHOG00000012173	-	81	64.179	Choloepus_hoffmanni
ENSSFOG00015003468	pde12	86	64.179	ENSCHOG00000002188	-	78	64.179	Choloepus_hoffmanni
ENSSFOG00015003468	pde12	91	64.286	ENSCPBG00000012353	PDE12	81	64.286	Chrysemys_picta_bellii
ENSSFOG00015003468	pde12	85	40.950	ENSCING00000006903	-	82	40.950	Ciona_intestinalis
ENSSFOG00015003468	pde12	88	64.776	ENSCANG00000038723	PDE12	79	64.776	Colobus_angolensis_palliatus
ENSSFOG00015003468	pde12	87	64.478	ENSCGRG00001021836	Pde12	79	64.478	Cricetulus_griseus_chok1gshd
ENSSFOG00015003468	pde12	87	64.478	ENSCGRG00000012319	Pde12	79	64.478	Cricetulus_griseus_crigri
ENSSFOG00015003468	pde12	87	65.373	ENSCSEG00000018538	pde12	84	65.373	Cynoglossus_semilaevis
ENSSFOG00015003468	pde12	68	81.013	ENSCVAG00000003624	pde12	72	81.013	Cyprinodon_variegatus
ENSSFOG00015003468	pde12	90	70.060	ENSDARG00000030964	pde12	84	70.060	Danio_rerio
ENSSFOG00015003468	pde12	88	63.582	ENSDNOG00000048413	PDE12	78	63.582	Dasypus_novemcinctus
ENSSFOG00015003468	pde12	87	64.478	ENSDORG00000004313	Pde12	79	64.478	Dipodomys_ordii
ENSSFOG00015003468	pde12	63	36.416	FBgn0051759	CG31759	61	36.416	Drosophila_melanogaster
ENSSFOG00015003468	pde12	62	61.458	ENSEBUG00000004803	pde12	61	61.458	Eptatretus_burgeri
ENSSFOG00015003468	pde12	87	63.881	ENSEASG00005000644	PDE12	79	63.881	Equus_asinus_asinus
ENSSFOG00015003468	pde12	88	63.881	ENSECAG00000005326	PDE12	79	63.881	Equus_caballus
ENSSFOG00015003468	pde12	57	64.740	ENSEEUG00000010406	-	53	64.740	Erinaceus_europaeus
ENSSFOG00015003468	pde12	93	70.746	ENSELUG00000014391	pde12	84	70.746	Esox_lucius
ENSSFOG00015003468	pde12	87	63.582	ENSFCAG00000031696	PDE12	79	63.582	Felis_catus
ENSSFOG00015003468	pde12	74	66.071	ENSFALG00000008401	PDE12	82	66.071	Ficedula_albicollis
ENSSFOG00015003468	pde12	88	63.881	ENSFDAG00000021278	PDE12	80	63.881	Fukomys_damarensis
ENSSFOG00015003468	pde12	84	66.221	ENSFHEG00000018967	pde12	86	55.013	Fundulus_heteroclitus
ENSSFOG00015003468	pde12	88	63.363	ENSGMOG00000018041	pde12	84	63.363	Gadus_morhua
ENSSFOG00015003468	pde12	87	66.866	ENSGALG00000052355	PDE12	81	66.866	Gallus_gallus
ENSSFOG00015003468	pde12	85	69.279	ENSGAFG00000002045	pde12	80	69.279	Gambusia_affinis
ENSSFOG00015003468	pde12	91	66.667	ENSGACG00000003914	pde12	84	66.667	Gasterosteus_aculeatus
ENSSFOG00015003468	pde12	91	63.988	ENSGAGG00000010266	PDE12	80	63.988	Gopherus_agassizii
ENSSFOG00015003468	pde12	93	65.075	ENSGGOG00000003312	PDE12	84	65.075	Gorilla_gorilla
ENSSFOG00015003468	pde12	87	66.369	ENSHBUG00000023370	pde12	80	66.369	Haplochromis_burtoni
ENSSFOG00015003468	pde12	88	64.776	ENSHGLG00000005661	PDE12	80	64.776	Heterocephalus_glaber_female
ENSSFOG00015003468	pde12	88	64.776	ENSHGLG00100001136	PDE12	80	64.776	Heterocephalus_glaber_male
ENSSFOG00015003468	pde12	93	64.809	ENSHCOG00000013749	pde12	84	64.809	Hippocampus_comes
ENSSFOG00015003468	pde12	90	69.345	ENSIPUG00000007123	Pde12	83	69.345	Ictalurus_punctatus
ENSSFOG00015003468	pde12	88	64.478	ENSSTOG00000007861	PDE12	79	64.478	Ictidomys_tridecemlineatus
ENSSFOG00015003468	pde12	87	64.179	ENSJJAG00000006038	Pde12	79	64.179	Jaculus_jaculus
ENSSFOG00015003468	pde12	93	69.048	ENSKMAG00000018523	pde12	84	69.048	Kryptolebias_marmoratus
ENSSFOG00015003468	pde12	89	67.262	ENSLBEG00000009762	PDE12	83	67.262	Labrus_bergylta
ENSSFOG00015003468	pde12	89	66.369	ENSLBEG00000026775	pde12	82	66.369	Labrus_bergylta
ENSSFOG00015003468	pde12	87	66.667	ENSLACG00000015492	PDE12	80	66.667	Latimeria_chalumnae
ENSSFOG00015003468	pde12	90	75.000	ENSLOCG00000013277	pde12	82	75.000	Lepisosteus_oculatus
ENSSFOG00015003468	pde12	85	64.179	ENSLAFG00000002821	PDE12	83	64.179	Loxodonta_africana
ENSSFOG00015003468	pde12	88	64.776	ENSMFAG00000030966	PDE12	79	64.776	Macaca_fascicularis
ENSSFOG00015003468	pde12	88	64.776	ENSMMUG00000004052	PDE12	79	64.776	Macaca_mulatta
ENSSFOG00015003468	pde12	88	64.776	ENSMNEG00000030068	PDE12	79	64.776	Macaca_nemestrina
ENSSFOG00015003468	pde12	88	64.776	ENSMLEG00000036137	PDE12	79	64.776	Mandrillus_leucophaeus
ENSSFOG00015003468	pde12	88	66.667	ENSMAMG00000014415	pde12	80	66.667	Mastacembelus_armatus
ENSSFOG00015003468	pde12	90	62.202	ENSMZEG00005028202	-	86	62.202	Maylandia_zebra
ENSSFOG00015003468	pde12	87	66.369	ENSMZEG00005016132	pde12	80	66.369	Maylandia_zebra
ENSSFOG00015003468	pde12	60	65.944	ENSMGAG00000006449	PDE12	100	65.944	Meleagris_gallopavo
ENSSFOG00015003468	pde12	87	65.075	ENSMAUG00000000442	Pde12	78	65.075	Mesocricetus_auratus
ENSSFOG00015003468	pde12	87	63.582	ENSMICG00000005723	PDE12	79	63.582	Microcebus_murinus
ENSSFOG00015003468	pde12	87	63.284	ENSMOCG00000020734	Pde12	80	63.284	Microtus_ochrogaster
ENSSFOG00015003468	pde12	88	66.071	ENSMMOG00000013636	pde12	80	66.071	Mola_mola
ENSSFOG00015003468	pde12	87	63.690	ENSMODG00000000155	PDE12	80	63.690	Monodelphis_domestica
ENSSFOG00015003468	pde12	93	66.766	ENSMALG00000022647	pde12	88	66.766	Monopterus_albus
ENSSFOG00015003468	pde12	87	64.478	MGP_CAROLIEiJ_G0019032	Pde12	79	64.478	Mus_caroli
ENSSFOG00015003468	pde12	87	63.582	ENSMUSG00000043702	Pde12	79	63.582	Mus_musculus
ENSSFOG00015003468	pde12	87	64.776	MGP_PahariEiJ_G0030049	Pde12	79	64.776	Mus_pahari
ENSSFOG00015003468	pde12	87	63.881	MGP_SPRETEiJ_G0019916	Pde12	79	63.881	Mus_spretus
ENSSFOG00015003468	pde12	93	62.985	ENSMPUG00000016869	PDE12	84	62.985	Mustela_putorius_furo
ENSSFOG00015003468	pde12	87	64.179	ENSMLUG00000026487	PDE12	80	64.179	Myotis_lucifugus
ENSSFOG00015003468	pde12	88	63.284	ENSNGAG00000001228	Pde12	80	63.284	Nannospalax_galili
ENSSFOG00015003468	pde12	91	55.916	ENSNBRG00000015769	pde12	64	55.916	Neolamprologus_brichardi
ENSSFOG00015003468	pde12	93	64.776	ENSNLEG00000007269	-	84	64.776	Nomascus_leucogenys
ENSSFOG00015003468	pde12	88	62.832	ENSNLEG00000034833	-	79	62.832	Nomascus_leucogenys
ENSSFOG00015003468	pde12	87	64.881	ENSMEUG00000006786	PDE12	82	64.881	Notamacropus_eugenii
ENSSFOG00015003468	pde12	88	64.776	ENSOPRG00000015273	PDE12	79	64.776	Ochotona_princeps
ENSSFOG00015003468	pde12	87	65.075	ENSODEG00000006268	PDE12	79	65.075	Octodon_degus
ENSSFOG00015003468	pde12	87	66.369	ENSONIG00000004293	pde12	84	66.369	Oreochromis_niloticus
ENSSFOG00015003468	pde12	81	63.333	ENSOANG00000012885	PDE12	82	63.333	Ornithorhynchus_anatinus
ENSSFOG00015003468	pde12	87	64.478	ENSOCUG00000000823	PDE12	79	64.478	Oryctolagus_cuniculus
ENSSFOG00015003468	pde12	90	66.866	ENSORLG00000017444	pde12	82	66.866	Oryzias_latipes
ENSSFOG00015003468	pde12	90	67.463	ENSORLG00020010469	pde12	82	67.463	Oryzias_latipes_hni
ENSSFOG00015003468	pde12	90	67.463	ENSORLG00015004093	pde12	82	67.463	Oryzias_latipes_hsok
ENSSFOG00015003468	pde12	88	67.463	ENSOMEG00000020900	pde12	81	67.463	Oryzias_melastigma
ENSSFOG00015003468	pde12	88	63.284	ENSOGAG00000024093	PDE12	79	63.284	Otolemur_garnettii
ENSSFOG00015003468	pde12	83	63.284	ENSOARG00000013642	PDE12	83	63.284	Ovis_aries
ENSSFOG00015003468	pde12	93	64.179	ENSPPAG00000034712	PDE12	84	64.179	Pan_paniscus
ENSSFOG00015003468	pde12	87	63.582	ENSPPRG00000011738	PDE12	79	63.582	Panthera_pardus
ENSSFOG00015003468	pde12	80	63.582	ENSPTIG00000019166	PDE12	80	63.582	Panthera_tigris_altaica
ENSSFOG00015003468	pde12	93	64.478	ENSPTRG00000030221	PDE12	84	64.478	Pan_troglodytes
ENSSFOG00015003468	pde12	88	64.776	ENSPANG00000007324	PDE12	79	64.776	Papio_anubis
ENSSFOG00015003468	pde12	93	74.107	ENSPKIG00000025354	pde12	87	74.107	Paramormyrops_kingsleyae
ENSSFOG00015003468	pde12	88	64.881	ENSPSIG00000004926	PDE12	78	64.881	Pelodiscus_sinensis
ENSSFOG00015003468	pde12	88	64.286	ENSPMGG00000006742	pde12	84	64.286	Periophthalmus_magnuspinnatus
ENSSFOG00015003468	pde12	92	53.550	ENSPEMG00000007259	Pde12	94	52.148	Peromyscus_maniculatus_bairdii
ENSSFOG00015003468	pde12	88	67.656	ENSPFOG00000011864	pde12	80	67.656	Poecilia_formosa
ENSSFOG00015003468	pde12	63	67.857	ENSPLAG00000023871	pde12	63	67.857	Poecilia_latipinna
ENSSFOG00015003468	pde12	88	67.857	ENSPMEG00000005674	pde12	81	67.857	Poecilia_mexicana
ENSSFOG00015003468	pde12	89	67.262	ENSPREG00000022831	pde12	81	67.262	Poecilia_reticulata
ENSSFOG00015003468	pde12	93	64.478	ENSPPYG00000013769	PDE12	84	64.478	Pongo_abelii
ENSSFOG00015003468	pde12	87	64.179	ENSPCOG00000026004	PDE12	79	64.179	Propithecus_coquereli
ENSSFOG00015003468	pde12	88	62.985	ENSPVAG00000008885	PDE12	79	62.985	Pteropus_vampyrus
ENSSFOG00015003468	pde12	87	66.667	ENSPNYG00000013258	pde12	80	66.667	Pundamilia_nyererei
ENSSFOG00015003468	pde12	93	73.214	ENSPNAG00000029032	pde12	86	73.433	Pygocentrus_nattereri
ENSSFOG00015003468	pde12	87	64.179	ENSRNOG00000059442	Pde12	79	64.179	Rattus_norvegicus
ENSSFOG00015003468	pde12	88	64.776	ENSRBIG00000040704	PDE12	79	64.776	Rhinopithecus_bieti
ENSSFOG00015003468	pde12	88	64.776	ENSRROG00000031279	PDE12	79	64.776	Rhinopithecus_roxellana
ENSSFOG00015003468	pde12	87	64.478	ENSSBOG00000023974	PDE12	79	64.478	Saimiri_boliviensis_boliviensis
ENSSFOG00015003468	pde12	87	68.452	ENSSMAG00000003258	pde12	83	68.452	Scophthalmus_maximus
ENSSFOG00015003468	pde12	88	69.851	ENSSDUG00000020470	pde12	80	69.851	Seriola_dumerili
ENSSFOG00015003468	pde12	87	69.254	ENSSLDG00000019833	pde12	81	69.254	Seriola_lalandi_dorsalis
ENSSFOG00015003468	pde12	87	64.478	ENSSARG00000007201	PDE12	79	64.478	Sorex_araneus
ENSSFOG00015003468	pde12	91	69.048	ENSSPAG00000014980	pde12	80	69.048	Stegastes_partitus
ENSSFOG00015003468	pde12	59	56.688	ENSSSCG00000034476	-	73	56.688	Sus_scrofa
ENSSFOG00015003468	pde12	88	64.478	ENSSSCG00000011465	-	79	64.478	Sus_scrofa
ENSSFOG00015003468	pde12	63	64.881	ENSTGUG00000007290	PDE12	91	64.881	Taeniopygia_guttata
ENSSFOG00015003468	pde12	93	66.964	ENSTRUG00000005159	pde12	85	66.964	Takifugu_rubripes
ENSSFOG00015003468	pde12	92	67.761	ENSTNIG00000017497	pde12	85	67.761	Tetraodon_nigroviridis
ENSSFOG00015003468	pde12	76	63.072	ENSTBEG00000008202	PDE12	71	63.072	Tupaia_belangeri
ENSSFOG00015003468	pde12	88	63.284	ENSTTRG00000014707	PDE12	79	63.284	Tursiops_truncatus
ENSSFOG00015003468	pde12	56	61.376	ENSUAMG00000008368	-	67	61.376	Ursus_americanus
ENSSFOG00015003468	pde12	87	63.284	ENSUAMG00000020634	-	79	63.284	Ursus_americanus
ENSSFOG00015003468	pde12	63	63.284	ENSUMAG00000021906	PDE12	76	63.284	Ursus_maritimus
ENSSFOG00015003468	pde12	87	62.985	ENSVVUG00000020335	PDE12	78	62.985	Vulpes_vulpes
ENSSFOG00015003468	pde12	87	55.589	ENSXETG00000008653	pde12	84	55.589	Xenopus_tropicalis
ENSSFOG00015003468	pde12	89	68.452	ENSXCOG00000000407	pde12	84	68.452	Xiphophorus_couchianus
ENSSFOG00015003468	pde12	91	69.048	ENSXMAG00000013370	pde12	83	69.048	Xiphophorus_maculatus