EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015003476 (Gene tree)
Gene ID: 108921833
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 14922 bases
Position: chrKV410778.1:1220398-1235319
Accession: 108921833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015005373	PUF	PF00806.19	3e-72	1	8
ENSSFOP00015005373	PUF	PF00806.19	3e-72	2	8
ENSSFOP00015005373	PUF	PF00806.19	3e-72	3	8
ENSSFOP00015005373	PUF	PF00806.19	3e-72	4	8
ENSSFOP00015005373	PUF	PF00806.19	3e-72	5	8
ENSSFOP00015005373	PUF	PF00806.19	3e-72	6	8
ENSSFOP00015005373	PUF	PF00806.19	3e-72	7	8
ENSSFOP00015005373	PUF	PF00806.19	3e-72	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015005463	-	3324	XM_018731551	ENSSFOP00015005373	1107 (aa)	XP_018587067	-

Gene Model

Click here to download ENSSFOG00015003476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003476	pum2	84	87.636	ENSG00000055917	PUM2	98	86.768	Homo_sapiens
ENSSFOG00015003476	pum2	86	80.475	ENSAMEG00000002823	PUM2	88	80.376	Ailuropoda_melanoleuca
ENSSFOG00015003476	pum2	89	86.279	ENSACIG00000010646	pum2	87	89.506	Amphilophus_citrinellus
ENSSFOG00015003476	pum2	98	75.231	ENSAOCG00000016619	pum2	88	76.601	Amphiprion_ocellaris
ENSSFOG00015003476	pum2	99	76.725	ENSAPEG00000019924	pum2	91	77.950	Amphiprion_percula
ENSSFOG00015003476	pum2	99	76.543	ENSATEG00000015030	pum2	91	77.559	Anabas_testudineus
ENSSFOG00015003476	pum2	100	77.766	ENSAPLG00000010496	PUM2	90	79.916	Anas_platyrhynchos
ENSSFOG00015003476	pum2	88	77.048	ENSACAG00000010491	PUM2	88	79.375	Anolis_carolinensis
ENSSFOG00015003476	pum2	84	87.636	ENSANAG00000021807	PUM2	87	86.768	Aotus_nancymaae
ENSSFOG00015003476	pum2	100	76.327	ENSACLG00000022532	pum2	91	77.766	Astatotilapia_calliptera
ENSSFOG00015003476	pum2	80	91.569	ENSBTAG00000011155	PUM2	87	86.768	Bos_taurus
ENSSFOG00015003476	pum2	84	87.636	ENSCJAG00000007450	PUM2	87	86.768	Callithrix_jacchus
ENSSFOG00015003476	pum2	86	79.855	ENSCAFG00000003839	PUM2	88	79.854	Canis_familiaris
ENSSFOG00015003476	pum2	80	91.803	ENSCAFG00020025689	PUM2	88	86.985	Canis_lupus_dingo
ENSSFOG00015003476	pum2	80	91.803	ENSCHIG00000022180	PUM2	87	86.985	Capra_hircus
ENSSFOG00015003476	pum2	86	87.419	ENSTSYG00000014463	PUM2	88	86.551	Carlito_syrichta
ENSSFOG00015003476	pum2	79	87.405	ENSCAPG00000016888	PUM2	87	93.333	Cavia_aperea
ENSSFOG00015003476	pum2	84	87.852	ENSCPOG00000031996	PUM2	87	86.985	Cavia_porcellus
ENSSFOG00015003476	pum2	84	87.636	ENSCCAG00000037035	PUM2	92	86.768	Cebus_capucinus
ENSSFOG00015003476	pum2	84	87.636	ENSCATG00000043826	PUM2	92	86.768	Cercocebus_atys
ENSSFOG00015003476	pum2	84	87.852	ENSCLAG00000006048	PUM2	87	86.985	Chinchilla_lanigera
ENSSFOG00015003476	pum2	86	79.609	ENSCSAG00000008087	PUM2	88	79.501	Chlorocebus_sabaeus
ENSSFOG00015003476	pum2	60	78.313	ENSCHOG00000004575	PUM2	68	71.335	Choloepus_hoffmanni
ENSSFOG00015003476	pum2	90	93.431	ENSCPBG00000019966	PUM2	89	86.985	Chrysemys_picta_bellii
ENSSFOG00015003476	pum2	84	87.636	ENSCANG00000032797	PUM2	92	86.768	Colobus_angolensis_palliatus
ENSSFOG00015003476	pum2	84	87.636	ENSCGRG00001025023	Pum2	86	93.431	Cricetulus_griseus_chok1gshd
ENSSFOG00015003476	pum2	84	87.636	ENSCGRG00000001580	Pum2	86	93.431	Cricetulus_griseus_crigri
ENSSFOG00015003476	pum2	100	84.922	ENSCSEG00000020899	pum2	91	77.075	Cynoglossus_semilaevis
ENSSFOG00015003476	pum2	99	76.181	ENSCVAG00000002426	pum2	91	75.378	Cyprinodon_variegatus
ENSSFOG00015003476	pum2	100	77.687	ENSDARG00000061040	pum2	91	77.443	Danio_rerio
ENSSFOG00015003476	pum2	80	90.336	ENSDNOG00000006733	PUM2	84	82.353	Dasypus_novemcinctus
ENSSFOG00015003476	pum2	88	78.398	ENSDORG00000011453	Pum2	92	79.501	Dipodomys_ordii
ENSSFOG00015003476	pum2	79	93.594	ENSETEG00000017683	PUM2	78	93.594	Echinops_telfairi
ENSSFOG00015003476	pum2	86	64.301	ENSEBUG00000004435	pum2	89	63.636	Eptatretus_burgeri
ENSSFOG00015003476	pum2	68	62.116	ENSEBUG00000014828	pum2	92	62.657	Eptatretus_burgeri
ENSSFOG00015003476	pum2	80	91.803	ENSEASG00005009429	PUM2	87	86.985	Equus_asinus_asinus
ENSSFOG00015003476	pum2	80	91.803	ENSECAG00000021930	PUM2	87	86.985	Equus_caballus
ENSSFOG00015003476	pum2	70	69.668	ENSEEUG00000003224	-	68	70.792	Erinaceus_europaeus
ENSSFOG00015003476	pum2	99	74.051	ENSELUG00000014997	pum2	91	76.210	Esox_lucius
ENSSFOG00015003476	pum2	80	91.569	ENSFCAG00000027520	PUM2	92	86.768	Felis_catus
ENSSFOG00015003476	pum2	88	77.677	ENSFALG00000001759	PUM2	88	79.813	Ficedula_albicollis
ENSSFOG00015003476	pum2	84	87.202	ENSFDAG00000019685	PUM2	87	86.334	Fukomys_damarensis
ENSSFOG00015003476	pum2	99	74.602	ENSFHEG00000021596	pum2	91	74.900	Fundulus_heteroclitus
ENSSFOG00015003476	pum2	78	93.431	ENSGALG00000016481	PUM2	82	86.985	Gallus_gallus
ENSSFOG00015003476	pum2	86	91.262	ENSGAFG00000013691	pum2	87	84.199	Gambusia_affinis
ENSSFOG00015003476	pum2	86	76.078	ENSGACG00000009670	pum2	88	75.205	Gasterosteus_aculeatus
ENSSFOG00015003476	pum2	100	78.182	ENSGAGG00000020698	PUM2	89	79.501	Gopherus_agassizii
ENSSFOG00015003476	pum2	84	87.636	ENSGGOG00000011374	PUM2	92	86.768	Gorilla_gorilla
ENSSFOG00015003476	pum2	99	87.342	ENSHBUG00000016453	pum2	89	87.342	Haplochromis_burtoni
ENSSFOG00015003476	pum2	84	86.117	ENSHGLG00000007892	PUM2	87	85.249	Heterocephalus_glaber_female
ENSSFOG00015003476	pum2	86	77.881	ENSHGLG00100015510	PUM2	88	77.443	Heterocephalus_glaber_male
ENSSFOG00015003476	pum2	99	75.207	ENSHCOG00000010119	pum2	91	76.349	Hippocampus_comes
ENSSFOG00015003476	pum2	84	87.636	ENSSTOG00000006262	PUM2	87	86.768	Ictidomys_tridecemlineatus
ENSSFOG00015003476	pum2	84	87.419	ENSJJAG00000020969	Pum2	87	86.551	Jaculus_jaculus
ENSSFOG00015003476	pum2	100	76.687	ENSKMAG00000017216	pum2	91	78.320	Kryptolebias_marmoratus
ENSSFOG00015003476	pum2	99	76.166	ENSLBEG00000020488	pum2	91	77.386	Labrus_bergylta
ENSSFOG00015003476	pum2	100	79.753	ENSLACG00000008723	PUM2	91	80.083	Latimeria_chalumnae
ENSSFOG00015003476	pum2	100	83.230	ENSLOCG00000017196	pum2	91	84.310	Lepisosteus_oculatus
ENSSFOG00015003476	pum2	86	79.321	ENSLAFG00000009278	PUM2	88	79.106	Loxodonta_africana
ENSSFOG00015003476	pum2	84	87.636	ENSMFAG00000000492	PUM2	92	86.768	Macaca_fascicularis
ENSSFOG00015003476	pum2	84	87.636	ENSMMUG00000023181	PUM2	87	86.768	Macaca_mulatta
ENSSFOG00015003476	pum2	84	87.636	ENSMNEG00000039659	PUM2	87	86.768	Macaca_nemestrina
ENSSFOG00015003476	pum2	84	87.636	ENSMLEG00000039243	PUM2	92	86.768	Mandrillus_leucophaeus
ENSSFOG00015003476	pum2	99	76.780	ENSMAMG00000006121	pum2	91	77.801	Mastacembelus_armatus
ENSSFOG00015003476	pum2	100	76.122	ENSMZEG00005000791	pum2	91	77.559	Maylandia_zebra
ENSSFOG00015003476	pum2	89	91.667	ENSMGAG00000014040	PUM2	88	79.771	Meleagris_gallopavo
ENSSFOG00015003476	pum2	86	79.506	ENSMAUG00000000311	Pum2	88	79.501	Mesocricetus_auratus
ENSSFOG00015003476	pum2	84	87.636	ENSMICG00000011647	PUM2	92	86.768	Microcebus_murinus
ENSSFOG00015003476	pum2	86	79.567	ENSMOCG00000013663	Pum2	88	79.562	Microtus_ochrogaster
ENSSFOG00015003476	pum2	86	75.485	ENSMMOG00000002975	pum2	88	76.622	Mola_mola
ENSSFOG00015003476	pum2	86	77.081	ENSMODG00000009811	PUM2	88	77.985	Monodelphis_domestica
ENSSFOG00015003476	pum2	86	90.754	ENSMALG00000022313	pum2	87	83.878	Monopterus_albus
ENSSFOG00015003476	pum2	84	87.636	MGP_CAROLIEiJ_G0017603	Pum2	86	93.431	Mus_caroli
ENSSFOG00015003476	pum2	84	87.419	ENSMUSG00000020594	Pum2	86	93.187	Mus_musculus
ENSSFOG00015003476	pum2	84	87.636	MGP_PahariEiJ_G0029361	Pum2	86	93.431	Mus_pahari
ENSSFOG00015003476	pum2	84	87.419	MGP_SPRETEiJ_G0018447	Pum2	86	93.187	Mus_spretus
ENSSFOG00015003476	pum2	86	80.062	ENSMPUG00000013734	PUM2	88	80.063	Mustela_putorius_furo
ENSSFOG00015003476	pum2	86	79.175	ENSMLUG00000007362	PUM2	88	79.167	Myotis_lucifugus
ENSSFOG00015003476	pum2	86	80.289	ENSNGAG00000016665	-	88	79.749	Nannospalax_galili
ENSSFOG00015003476	pum2	83	53.061	ENSNGAG00000016239	-	67	61.836	Nannospalax_galili
ENSSFOG00015003476	pum2	84	87.419	ENSNLEG00000002509	PUM2	92	93.431	Nomascus_leucogenys
ENSSFOG00015003476	pum2	80	75.229	ENSMEUG00000016567	PUM2	81	75.229	Notamacropus_eugenii
ENSSFOG00015003476	pum2	64	71.274	ENSOPRG00000001963	PUM2	68	71.058	Ochotona_princeps
ENSSFOG00015003476	pum2	84	87.636	ENSODEG00000007823	PUM2	87	87.202	Octodon_degus
ENSSFOG00015003476	pum2	100	76.122	ENSONIG00000006119	pum2	91	77.559	Oreochromis_niloticus
ENSSFOG00015003476	pum2	86	79.424	ENSOCUG00000017908	PUM2	88	79.210	Oryctolagus_cuniculus
ENSSFOG00015003476	pum2	87	90.976	ENSORLG00000012611	pum2	90	76.819	Oryzias_latipes
ENSSFOG00015003476	pum2	100	76.483	ENSORLG00020014452	pum2	90	76.507	Oryzias_latipes_hni
ENSSFOG00015003476	pum2	100	76.742	ENSORLG00015009427	pum2	90	76.771	Oryzias_latipes_hsok
ENSSFOG00015003476	pum2	82	87.589	ENSOGAG00000002187	PUM2	87	86.635	Otolemur_garnettii
ENSSFOG00015003476	pum2	86	79.588	ENSOARG00000017236	PUM2	88	79.688	Ovis_aries
ENSSFOG00015003476	pum2	84	87.636	ENSPPAG00000023095	PUM2	92	86.768	Pan_paniscus
ENSSFOG00015003476	pum2	80	91.569	ENSPPRG00000021443	PUM2	92	86.768	Panthera_pardus
ENSSFOG00015003476	pum2	80	91.569	ENSPTIG00000018982	PUM2	92	86.768	Panthera_tigris_altaica
ENSSFOG00015003476	pum2	84	87.636	ENSPTRG00000011692	PUM2	92	86.768	Pan_troglodytes
ENSSFOG00015003476	pum2	86	68.343	ENSPANG00000009393	PUM2	100	90.141	Papio_anubis
ENSSFOG00015003476	pum2	100	77.273	ENSPSIG00000011626	PUM2	90	79.396	Pelodiscus_sinensis
ENSSFOG00015003476	pum2	86	79.278	ENSPEMG00000008357	Pum2	88	79.583	Peromyscus_maniculatus_bairdii
ENSSFOG00015003476	pum2	86	64.706	ENSPMAG00000007038	pum2	88	64.176	Petromyzon_marinus
ENSSFOG00015003476	pum2	74	88.993	ENSPCIG00000022139	PUM2	87	84.599	Phascolarctos_cinereus
ENSSFOG00015003476	pum2	99	73.996	ENSPFOG00000019208	pum2	91	75.076	Poecilia_formosa
ENSSFOG00015003476	pum2	86	91.262	ENSPLAG00000001826	pum2	87	84.199	Poecilia_latipinna
ENSSFOG00015003476	pum2	99	76.029	ENSPMEG00000015766	pum2	100	75.355	Poecilia_mexicana
ENSSFOG00015003476	pum2	77	91.262	ENSPREG00000006905	pum2	87	84.199	Poecilia_reticulata
ENSSFOG00015003476	pum2	86	79.815	ENSPPYG00000012617	PUM2	88	79.605	Pongo_abelii
ENSSFOG00015003476	pum2	57	95.652	ENSPCAG00000008001	PUM2	58	95.652	Procavia_capensis
ENSSFOG00015003476	pum2	84	87.636	ENSPCOG00000019636	PUM2	88	86.768	Propithecus_coquereli
ENSSFOG00015003476	pum2	86	74.174	ENSPVAG00000002920	PUM2	90	74.113	Pteropus_vampyrus
ENSSFOG00015003476	pum2	100	76.327	ENSPNYG00000022901	pum2	91	77.766	Pundamilia_nyererei
ENSSFOG00015003476	pum2	97	76.898	ENSPNAG00000008025	pum2	90	81.481	Pygocentrus_nattereri
ENSSFOG00015003476	pum2	84	87.202	ENSRNOG00000006180	Pum2	86	92.944	Rattus_norvegicus
ENSSFOG00015003476	pum2	84	87.636	ENSRBIG00000044880	PUM2	92	86.768	Rhinopithecus_bieti
ENSSFOG00015003476	pum2	84	87.636	ENSSBOG00000022007	PUM2	92	86.768	Saimiri_boliviensis_boliviensis
ENSSFOG00015003476	pum2	86	76.094	ENSSHAG00000002778	PUM2	88	75.951	Sarcophilus_harrisii
ENSSFOG00015003476	pum2	99	76.574	ENSSMAG00000018236	pum2	91	77.697	Scophthalmus_maximus
ENSSFOG00015003476	pum2	100	75.333	ENSSDUG00000001800	pum2	100	76.106	Seriola_dumerili
ENSSFOG00015003476	pum2	99	76.749	ENSSLDG00000000981	pum2	91	77.870	Seriola_lalandi_dorsalis
ENSSFOG00015003476	pum2	83	70.347	ENSSARG00000010992	PUM2	73	69.181	Sorex_araneus
ENSSFOG00015003476	pum2	86	79.072	ENSSPUG00000017012	PUM2	89	79.688	Sphenodon_punctatus
ENSSFOG00015003476	pum2	99	76.939	ENSSPAG00000022948	pum2	91	78.054	Stegastes_partitus
ENSSFOG00015003476	pum2	80	91.803	ENSSSCG00000008600	PUM2	92	86.985	Sus_scrofa
ENSSFOG00015003476	pum2	88	77.677	ENSTGUG00000013149	PUM2	88	79.813	Taeniopygia_guttata
ENSSFOG00015003476	pum2	100	73.203	ENSTRUG00000018167	pum2	90	72.765	Takifugu_rubripes
ENSSFOG00015003476	pum2	100	75.333	ENSTNIG00000003116	pum2	91	76.550	Tetraodon_nigroviridis
ENSSFOG00015003476	pum2	71	92.355	ENSTBEG00000008729	PUM2	74	92.371	Tupaia_belangeri
ENSSFOG00015003476	pum2	86	79.545	ENSTTRG00000004887	PUM2	88	79.645	Tursiops_truncatus
ENSSFOG00015003476	pum2	64	91.803	ENSUAMG00000008120	PUM2	97	86.985	Ursus_americanus
ENSSFOG00015003476	pum2	80	91.803	ENSUMAG00000023198	PUM2	87	86.985	Ursus_maritimus
ENSSFOG00015003476	pum2	86	79.752	ENSVPAG00000005056	PUM2	88	79.749	Vicugna_pacos
ENSSFOG00015003476	pum2	80	91.803	ENSVVUG00000014829	PUM2	87	86.985	Vulpes_vulpes
ENSSFOG00015003476	pum2	100	70.805	ENSXETG00000008903	pum2	90	74.089	Xenopus_tropicalis
ENSSFOG00015003476	pum2	100	74.512	ENSXCOG00000002556	pum2	100	75.355	Xiphophorus_couchianus
ENSSFOG00015003476	pum2	86	91.262	ENSXMAG00000017682	pum2	87	84.199	Xiphophorus_maculatus