EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015003516 (Gene tree)
Gene ID: 108940481
Gene Symbol: -
Alias: -
Full Name: non-canonical poly(A) RNA polymerase PAPD7-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 12538 bases
Position: chrKV411212.1:1959113-1971650
Accession: 108940481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015005346	PAP_assoc	PF03828.19	5.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015005433	-	3994	XM_018762699	ENSSFOP00015005346	527 (aa)	XP_018618215	A0A1W5AY77

Gene Model

Click here to download ENSSFOG00015003516's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015003516	-	73	56.589	ENSSFOG00015001704	tent4b	64	55.890
ENSSFOG00015003516	-	59	74.110	ENSSFOG00015019677	TENT4B	65	62.899
ENSSFOG00015003516	-	83	80.447	ENSSFOG00015001756	tent4a	85	80.780

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003516	-	100	66.055	ENSG00000112941	TENT4A	100	74.074	Homo_sapiens
ENSSFOG00015003516	-	100	64.534	ENSAPOG00000002178	tent4a	63	65.082	Acanthochromis_polyacanthus
ENSSFOG00015003516	-	99	55.908	ENSAPOG00000018106	-	70	55.732	Acanthochromis_polyacanthus
ENSSFOG00015003516	-	100	68.739	ENSAMEG00000002806	TENT4A	100	68.739	Ailuropoda_melanoleuca
ENSSFOG00015003516	-	100	59.738	ENSACIG00000013326	tent4a	82	74.157	Amphilophus_citrinellus
ENSSFOG00015003516	-	67	63.456	ENSACIG00000014234	-	56	63.456	Amphilophus_citrinellus
ENSSFOG00015003516	-	86	62.256	ENSAOCG00000013501	-	56	64.783	Amphiprion_ocellaris
ENSSFOG00015003516	-	100	66.300	ENSAOCG00000019251	tent4a	65	67.523	Amphiprion_ocellaris
ENSSFOG00015003516	-	89	60.164	ENSAPEG00000015522	-	56	63.871	Amphiprion_percula
ENSSFOG00015003516	-	100	66.484	ENSAPEG00000002703	tent4a	97	80.337	Amphiprion_percula
ENSSFOG00015003516	-	99	68.140	ENSATEG00000006898	tent4a	94	81.180	Anabas_testudineus
ENSSFOG00015003516	-	91	61.723	ENSATEG00000024197	-	53	64.574	Anabas_testudineus
ENSSFOG00015003516	-	83	77.261	ENSAPLG00000011309	TENT4A	96	78.992	Anas_platyrhynchos
ENSSFOG00015003516	-	100	64.103	ENSACAG00000000497	TENT4A	100	63.486	Anolis_carolinensis
ENSSFOG00015003516	-	100	64.899	ENSANAG00000037806	TENT4A	73	63.620	Aotus_nancymaae
ENSSFOG00015003516	-	100	60.556	ENSACLG00000014408	tent4a	88	59.777	Astatotilapia_calliptera
ENSSFOG00015003516	-	100	64.607	ENSAMXG00000017691	tent4a	59	64.981	Astyanax_mexicanus
ENSSFOG00015003516	-	100	62.011	ENSAMXG00000039964	TENT4A	69	61.639	Astyanax_mexicanus
ENSSFOG00015003516	-	96	66.667	ENSBTAG00000003381	TENT4A	92	70.217	Bos_taurus
ENSSFOG00015003516	-	100	66.117	ENSCJAG00000008742	TENT4A	68	66.300	Callithrix_jacchus
ENSSFOG00015003516	-	100	68.921	ENSCAFG00000010319	TENT4A	100	68.921	Canis_familiaris
ENSSFOG00015003516	-	100	68.921	ENSCAFG00020022835	TENT4A	100	68.921	Canis_lupus_dingo
ENSSFOG00015003516	-	100	67.523	ENSCHIG00000017328	TENT4A	100	67.523	Capra_hircus
ENSSFOG00015003516	-	100	66.545	ENSTSYG00000000631	TENT4A	100	66.728	Carlito_syrichta
ENSSFOG00015003516	-	100	67.339	ENSCAPG00000007792	TENT4A	100	67.339	Cavia_aperea
ENSSFOG00015003516	-	100	67.339	ENSCPOG00000009006	TENT4A	100	67.339	Cavia_porcellus
ENSSFOG00015003516	-	100	65.996	ENSCCAG00000006730	TENT4A	100	66.179	Cebus_capucinus
ENSSFOG00015003516	-	100	63.486	ENSCATG00000034531	TENT4A	73	64.037	Cercocebus_atys
ENSSFOG00015003516	-	100	68.073	ENSCLAG00000003733	TENT4A	100	68.257	Chinchilla_lanigera
ENSSFOG00015003516	-	100	66.055	ENSCSAG00000017336	TENT4A	100	66.239	Chlorocebus_sabaeus
ENSSFOG00015003516	-	100	68.934	ENSCPBG00000006514	TENT4A	70	68.934	Chrysemys_picta_bellii
ENSSFOG00015003516	-	100	65.505	ENSCANG00000022871	TENT4A	100	66.055	Colobus_angolensis_palliatus
ENSSFOG00015003516	-	100	66.788	ENSCGRG00001014344	Tent4a	69	66.971	Cricetulus_griseus_chok1gshd
ENSSFOG00015003516	-	100	66.788	ENSCGRG00000006274	Tent4a	100	66.971	Cricetulus_griseus_crigri
ENSSFOG00015003516	-	98	56.272	ENSCSEG00000003887	-	56	63.539	Cynoglossus_semilaevis
ENSSFOG00015003516	-	100	67.093	ENSCSEG00000011470	tent4a	65	66.788	Cynoglossus_semilaevis
ENSSFOG00015003516	-	100	61.651	ENSCVAG00000021741	tent4a	67	61.468	Cyprinodon_variegatus
ENSSFOG00015003516	-	59	76.282	ENSCVAG00000008463	-	67	76.282	Cyprinodon_variegatus
ENSSFOG00015003516	-	100	70.544	ENSDARG00000062114	tent4a	93	80.056	Danio_rerio
ENSSFOG00015003516	-	100	64.899	ENSDNOG00000015096	TENT4A	82	64.899	Dasypus_novemcinctus
ENSSFOG00015003516	-	100	65.814	ENSDORG00000023216	Tent4a	100	65.814	Dipodomys_ordii
ENSSFOG00015003516	-	80	71.831	ENSETEG00000020403	TENT4A	98	72.837	Echinops_telfairi
ENSSFOG00015003516	-	100	68.007	ENSEASG00005018583	TENT4A	100	68.007	Equus_asinus_asinus
ENSSFOG00015003516	-	100	68.007	ENSECAG00000010134	TENT4A	69	68.007	Equus_caballus
ENSSFOG00015003516	-	56	82.143	ENSEEUG00000004179	-	83	82.143	Erinaceus_europaeus
ENSSFOG00015003516	-	89	66.046	ENSELUG00000024141	tent4a	71	79.808	Esox_lucius
ENSSFOG00015003516	-	100	68.073	ENSFCAG00000003474	TENT4A	68	68.073	Felis_catus
ENSSFOG00015003516	-	83	76.804	ENSFALG00000007179	TENT4A	100	76.804	Ficedula_albicollis
ENSSFOG00015003516	-	100	66.972	ENSFDAG00000005946	TENT4A	100	67.156	Fukomys_damarensis
ENSSFOG00015003516	-	100	62.837	ENSFHEG00000017843	tent4a	65	62.837	Fundulus_heteroclitus
ENSSFOG00015003516	-	59	75.962	ENSFHEG00000006086	-	52	63.170	Fundulus_heteroclitus
ENSSFOG00015003516	-	100	64.564	ENSGALG00000013061	PAPD7	96	79.272	Gallus_gallus
ENSSFOG00015003516	-	59	77.987	ENSGAFG00000000179	-	54	65.924	Gambusia_affinis
ENSSFOG00015003516	-	100	65.818	ENSGAFG00000018741	tent4a	65	65.027	Gambusia_affinis
ENSSFOG00015003516	-	68	72.067	ENSGACG00000006531	-	82	72.346	Gasterosteus_aculeatus
ENSSFOG00015003516	-	100	66.542	ENSGACG00000008953	tent4a	100	67.041	Gasterosteus_aculeatus
ENSSFOG00015003516	-	77	78.933	ENSGAGG00000017192	TENT4A	84	78.933	Gopherus_agassizii
ENSSFOG00015003516	-	100	66.055	ENSGGOG00000013866	-	77	66.239	Gorilla_gorilla
ENSSFOG00015003516	-	100	60.708	ENSHBUG00000022127	tent4a	100	62.948	Haplochromis_burtoni
ENSSFOG00015003516	-	100	65.872	ENSHGLG00000005593	TENT4A	100	66.422	Heterocephalus_glaber_female
ENSSFOG00015003516	-	100	65.872	ENSHGLG00100016621	TENT4A	100	66.422	Heterocephalus_glaber_male
ENSSFOG00015003516	-	100	65.746	ENSHCOG00000018008	tent4a	67	65.746	Hippocampus_comes
ENSSFOG00015003516	-	61	74.534	ENSHCOG00000000915	-	65	74.534	Hippocampus_comes
ENSSFOG00015003516	-	100	65.854	ENSIPUG00000014941	tent4a	60	78.552	Ictalurus_punctatus
ENSSFOG00015003516	-	100	61.394	ENSIPUG00000000878	-	57	68.233	Ictalurus_punctatus
ENSSFOG00015003516	-	100	66.545	ENSSTOG00000004554	TENT4A	100	66.545	Ictidomys_tridecemlineatus
ENSSFOG00015003516	-	100	66.362	ENSJJAG00000007205	Tent4a	100	66.362	Jaculus_jaculus
ENSSFOG00015003516	-	84	68.640	ENSKMAG00000000725	tent4a	84	77.528	Kryptolebias_marmoratus
ENSSFOG00015003516	-	100	68.750	ENSLBEG00000025657	tent4a	66	68.566	Labrus_bergylta
ENSSFOG00015003516	-	100	76.438	ENSLOCG00000008727	tent4a	70	76.438	Lepisosteus_oculatus
ENSSFOG00015003516	-	100	65.818	ENSLAFG00000004787	TENT4A	100	66.000	Loxodonta_africana
ENSSFOG00015003516	-	100	66.239	ENSMFAG00000038658	TENT4A	72	66.422	Macaca_fascicularis
ENSSFOG00015003516	-	100	66.239	ENSMMUG00000013189	TENT4A	68	66.422	Macaca_mulatta
ENSSFOG00015003516	-	100	66.055	ENSMNEG00000029090	TENT4A	69	66.239	Macaca_nemestrina
ENSSFOG00015003516	-	100	66.055	ENSMLEG00000030994	TENT4A	100	66.239	Mandrillus_leucophaeus
ENSSFOG00015003516	-	100	66.851	ENSMAMG00000004931	tent4a	66	67.772	Mastacembelus_armatus
ENSSFOG00015003516	-	100	64.286	ENSMZEG00005000080	tent4a	65	65.314	Maylandia_zebra
ENSSFOG00015003516	-	100	65.448	ENSMGAG00000006315	TENT4A	96	78.992	Meleagris_gallopavo
ENSSFOG00015003516	-	100	66.241	ENSMAUG00000008017	Tent4a	100	66.241	Mesocricetus_auratus
ENSSFOG00015003516	-	100	65.448	ENSMICG00000016562	TENT4A	100	65.814	Microcebus_murinus
ENSSFOG00015003516	-	100	66.728	ENSMOCG00000008477	Tent4a	100	66.910	Microtus_ochrogaster
ENSSFOG00015003516	-	100	60.000	ENSMMOG00000021181	tent4a	88	59.074	Mola_mola
ENSSFOG00015003516	-	59	72.990	ENSMMOG00000008539	-	65	72.990	Mola_mola
ENSSFOG00015003516	-	100	67.824	ENSMODG00000002052	TENT4A	62	68.373	Monodelphis_domestica
ENSSFOG00015003516	-	87	69.481	ENSMALG00000002692	tent4a	57	73.333	Monopterus_albus
ENSSFOG00015003516	-	67	71.866	ENSMALG00000018694	-	56	71.018	Monopterus_albus
ENSSFOG00015003516	-	100	62.107	MGP_CAROLIEiJ_G0018689	-	67	62.107	Mus_caroli
ENSSFOG00015003516	-	100	66.179	ENSMUSG00000034575	Tent4a	100	66.362	Mus_musculus
ENSSFOG00015003516	-	100	66.362	MGP_PahariEiJ_G0015770	-	69	66.545	Mus_pahari
ENSSFOG00015003516	-	100	59.598	MGP_SPRETEiJ_G0019573	-	68	59.781	Mus_spretus
ENSSFOG00015003516	-	100	68.373	ENSMPUG00000007530	TENT4A	100	68.373	Mustela_putorius_furo
ENSSFOG00015003516	-	100	67.093	ENSMLUG00000004424	TENT4A	100	66.910	Myotis_lucifugus
ENSSFOG00015003516	-	100	66.910	ENSNGAG00000006352	Tent4a	100	66.910	Nannospalax_galili
ENSSFOG00015003516	-	59	75.806	ENSNBRG00000009218	TENT4A	62	75.806	Neolamprologus_brichardi
ENSSFOG00015003516	-	80	76.966	ENSNBRG00000001414	tent4a	95	76.966	Neolamprologus_brichardi
ENSSFOG00015003516	-	100	59.083	ENSNLEG00000011434	-	77	59.083	Nomascus_leucogenys
ENSSFOG00015003516	-	90	53.830	ENSMEUG00000004007	TENT4A	96	53.247	Notamacropus_eugenii
ENSSFOG00015003516	-	100	67.339	ENSODEG00000018357	TENT4A	100	67.339	Octodon_degus
ENSSFOG00015003516	-	84	69.316	ENSONIG00000007768	tent4a	84	69.247	Oreochromis_niloticus
ENSSFOG00015003516	-	67	54.223	ENSOANG00000001347	-	95	52.722	Ornithorhynchus_anatinus
ENSSFOG00015003516	-	100	68.315	ENSOANG00000011579	-	100	68.315	Ornithorhynchus_anatinus
ENSSFOG00015003516	-	100	66.910	ENSOCUG00000017025	TENT4A	100	66.971	Oryctolagus_cuniculus
ENSSFOG00015003516	-	100	68.657	ENSORLG00000025175	tent4a	68	69.216	Oryzias_latipes
ENSSFOG00015003516	-	100	68.411	ENSORLG00020019731	tent4a	68	68.972	Oryzias_latipes_hni
ENSSFOG00015003516	-	77	80.056	ENSORLG00015007889	tent4a	90	80.056	Oryzias_latipes_hsok
ENSSFOG00015003516	-	69	62.308	ENSOMEG00000014052	-	81	63.636	Oryzias_melastigma
ENSSFOG00015003516	-	99	64.850	ENSOMEG00000013540	tent4a	55	64.662	Oryzias_melastigma
ENSSFOG00015003516	-	100	66.179	ENSOGAG00000015032	TENT4A	100	66.179	Otolemur_garnettii
ENSSFOG00015003516	-	99	67.283	ENSOARG00000014904	TENT4A	99	67.283	Ovis_aries
ENSSFOG00015003516	-	100	66.055	ENSPPAG00000034356	TENT4A	100	66.239	Pan_paniscus
ENSSFOG00015003516	-	100	67.890	ENSPPRG00000002409	TENT4A	100	67.890	Panthera_pardus
ENSSFOG00015003516	-	90	63.158	ENSPTIG00000013200	-	67	86.230	Panthera_tigris_altaica
ENSSFOG00015003516	-	100	66.055	ENSPTRG00000016717	TENT4A	75	64.037	Pan_troglodytes
ENSSFOG00015003516	-	100	63.486	ENSPANG00000004005	TENT4A	72	64.037	Papio_anubis
ENSSFOG00015003516	-	99	68.008	ENSPKIG00000024130	tent4a	71	67.433	Paramormyrops_kingsleyae
ENSSFOG00015003516	-	100	79.924	ENSPKIG00000020499	-	67	79.924	Paramormyrops_kingsleyae
ENSSFOG00015003516	-	100	67.890	ENSPSIG00000015964	TENT4A	100	67.890	Pelodiscus_sinensis
ENSSFOG00015003516	-	100	65.926	ENSPMGG00000004132	tent4a	89	65.926	Periophthalmus_magnuspinnatus
ENSSFOG00015003516	-	69	69.126	ENSPMGG00000007999	TENT4A	71	74.096	Periophthalmus_magnuspinnatus
ENSSFOG00015003516	-	100	66.362	ENSPEMG00000024121	Tent4a	100	66.545	Peromyscus_maniculatus_bairdii
ENSSFOG00015003516	-	100	67.459	ENSPCIG00000017056	TENT4A	62	68.007	Phascolarctos_cinereus
ENSSFOG00015003516	-	100	62.569	ENSPFOG00000003961	tent4a	63	63.119	Poecilia_formosa
ENSSFOG00015003516	-	59	78.302	ENSPLAG00000004468	TENT4A	62	80.935	Poecilia_latipinna
ENSSFOG00015003516	-	100	64.845	ENSPLAG00000007134	tent4a	65	64.663	Poecilia_latipinna
ENSSFOG00015003516	-	100	65.209	ENSPMEG00000006428	tent4a	65	65.027	Poecilia_mexicana
ENSSFOG00015003516	-	59	75.080	ENSPREG00000011257	TENT4A	74	64.589	Poecilia_reticulata
ENSSFOG00015003516	-	100	62.894	ENSPREG00000017547	tent4a	88	60.853	Poecilia_reticulata
ENSSFOG00015003516	-	100	65.872	ENSPPYG00000015334	-	100	66.422	Pongo_abelii
ENSSFOG00015003516	-	100	66.179	ENSPCOG00000016295	TENT4A	100	66.179	Propithecus_coquereli
ENSSFOG00015003516	-	100	66.972	ENSPVAG00000000511	TENT4A	100	67.156	Pteropus_vampyrus
ENSSFOG00015003516	-	100	59.853	ENSPNYG00000010769	tent4a	100	62.749	Pundamilia_nyererei
ENSSFOG00015003516	-	59	71.613	ENSPNYG00000008164	TENT4A	63	71.613	Pundamilia_nyererei
ENSSFOG00015003516	-	100	65.977	ENSPNAG00000026563	tent4a	63	66.165	Pygocentrus_nattereri
ENSSFOG00015003516	-	100	61.453	ENSPNAG00000011603	TENT4A	69	61.266	Pygocentrus_nattereri
ENSSFOG00015003516	-	100	66.545	ENSRNOG00000017613	Tent4a	100	64.286	Rattus_norvegicus
ENSSFOG00015003516	-	100	65.872	ENSRBIG00000027491	TENT4A	100	66.422	Rhinopithecus_bieti
ENSSFOG00015003516	-	100	65.872	ENSRROG00000039864	TENT4A	100	66.422	Rhinopithecus_roxellana
ENSSFOG00015003516	-	100	65.631	ENSSBOG00000035549	TENT4A	100	66.179	Saimiri_boliviensis_boliviensis
ENSSFOG00015003516	-	100	67.824	ENSSHAG00000012100	TENT4A	100	68.373	Sarcophilus_harrisii
ENSSFOG00015003516	-	70	70.081	ENSSMAG00000003989	-	70	75.529	Scophthalmus_maximus
ENSSFOG00015003516	-	100	65.177	ENSSMAG00000020671	tent4a	89	65.299	Scophthalmus_maximus
ENSSFOG00015003516	-	98	57.218	ENSSDUG00000014825	-	56	64.935	Seriola_dumerili
ENSSFOG00015003516	-	100	67.701	ENSSDUG00000002157	tent4a	65	68.739	Seriola_dumerili
ENSSFOG00015003516	-	98	57.394	ENSSLDG00000019746	-	56	65.152	Seriola_lalandi_dorsalis
ENSSFOG00015003516	-	100	61.967	ENSSLDG00000004371	tent4a	89	62.202	Seriola_lalandi_dorsalis
ENSSFOG00015003516	-	72	73.779	ENSSPUG00000008830	TENT4A	88	73.779	Sphenodon_punctatus
ENSSFOG00015003516	-	98	55.714	ENSSPAG00000017401	-	55	64.410	Stegastes_partitus
ENSSFOG00015003516	-	100	62.778	ENSSPAG00000003618	tent4a	89	62.222	Stegastes_partitus
ENSSFOG00015003516	-	100	66.788	ENSSSCG00000017102	TENT4A	68	67.276	Sus_scrofa
ENSSFOG00015003516	-	100	64.404	ENSTGUG00000007771	TENT4A	100	64.945	Taeniopygia_guttata
ENSSFOG00015003516	-	90	61.777	ENSTRUG00000006698	-	59	62.664	Takifugu_rubripes
ENSSFOG00015003516	-	100	65.688	ENSTRUG00000012098	tent4a	98	72.606	Takifugu_rubripes
ENSSFOG00015003516	-	84	60.991	ENSTNIG00000000791	tent4a	100	61.978	Tetraodon_nigroviridis
ENSSFOG00015003516	-	90	57.588	ENSTBEG00000015071	TENT4A	96	56.739	Tupaia_belangeri
ENSSFOG00015003516	-	100	66.298	ENSTTRG00000012547	TENT4A	100	66.298	Tursiops_truncatus
ENSSFOG00015003516	-	100	68.739	ENSUAMG00000024711	TENT4A	93	68.373	Ursus_americanus
ENSSFOG00015003516	-	100	68.739	ENSUMAG00000021088	TENT4A	100	68.739	Ursus_maritimus
ENSSFOG00015003516	-	58	72.131	ENSVPAG00000006821	-	72	72.131	Vicugna_pacos
ENSSFOG00015003516	-	100	68.921	ENSVVUG00000017702	TENT4A	100	68.921	Vulpes_vulpes
ENSSFOG00015003516	-	100	62.852	ENSXCOG00000002570	tent4a	88	60.788	Xiphophorus_couchianus
ENSSFOG00015003516	-	100	64.954	ENSXMAG00000013580	tent4a	97	78.652	Xiphophorus_maculatus
ENSSFOG00015003516	-	59	75.080	ENSXMAG00000026228	TENT4A	66	75.080	Xiphophorus_maculatus