EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015003609 (Gene tree)
Gene ID: 108922474
Gene Symbol: nmd3
Alias: nmd3l|zgc:113103
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 13753 bases
Position: chrKV410815.1:1411584-1425336
Accession: 108922474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015005536	NMD3	PF04981.13	6.1e-81	1	1
ENSSFOP00015005517	NMD3	PF04981.13	6.9e-81	1	1
ENSSFOP00015005500	NMD3	PF04981.13	7e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015005607	-	1648	-	ENSSFOP00015005517	535 (aa)	-	-
ENSSFOT00015005590	-	1683	XM_018732630	ENSSFOP00015005500	537 (aa)	XP_018588146	-
ENSSFOT00015005626	-	6202	-	ENSSFOP00015005536	504 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015003609's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03008	Ribosome biogenesis in eukaryotes	KEGG
sfm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003609's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003609	nmd3	99	76.984	ENSG00000169251	NMD3	100	78.440	Homo_sapiens
ENSSFOG00015003609	nmd3	100	90.079	ENSAPOG00000022912	nmd3	100	90.079	Acanthochromis_polyacanthus
ENSSFOG00015003609	nmd3	99	76.832	ENSAMEG00000001584	NMD3	99	76.832	Ailuropoda_melanoleuca
ENSSFOG00015003609	nmd3	100	85.516	ENSACIG00000015196	nmd3	100	85.516	Amphilophus_citrinellus
ENSSFOG00015003609	nmd3	100	90.675	ENSAOCG00000009086	nmd3	100	90.675	Amphiprion_ocellaris
ENSSFOG00015003609	nmd3	100	90.675	ENSAPEG00000000329	nmd3	100	90.675	Amphiprion_percula
ENSSFOG00015003609	nmd3	100	90.873	ENSATEG00000014351	nmd3	100	90.873	Anabas_testudineus
ENSSFOG00015003609	nmd3	100	78.020	ENSAPLG00000014786	NMD3	100	78.020	Anas_platyrhynchos
ENSSFOG00015003609	nmd3	100	80.990	ENSACAG00000007349	NMD3	100	80.990	Anolis_carolinensis
ENSSFOG00015003609	nmd3	99	77.355	ENSANAG00000026434	NMD3	99	77.419	Aotus_nancymaae
ENSSFOG00015003609	nmd3	100	90.476	ENSACLG00000015520	nmd3	100	90.476	Astatotilapia_calliptera
ENSSFOG00015003609	nmd3	100	90.278	ENSAMXG00000014415	nmd3	100	90.278	Astyanax_mexicanus
ENSSFOG00015003609	nmd3	99	76.786	ENSBTAG00000016228	NMD3	100	76.786	Bos_taurus
ENSSFOG00015003609	nmd3	96	48.988	WBGene00012030	T25G3.3	96	48.988	Caenorhabditis_elegans
ENSSFOG00015003609	nmd3	99	77.309	ENSCJAG00000002900	NMD3	97	77.309	Callithrix_jacchus
ENSSFOG00015003609	nmd3	99	77.309	ENSCAFG00000014352	NMD3	97	77.309	Canis_familiaris
ENSSFOG00015003609	nmd3	99	76.984	ENSCAFG00020021145	NMD3	99	76.984	Canis_lupus_dingo
ENSSFOG00015003609	nmd3	99	76.389	ENSCHIG00000016015	NMD3	100	76.389	Capra_hircus
ENSSFOG00015003609	nmd3	99	76.984	ENSTSYG00000002155	NMD3	99	76.984	Carlito_syrichta
ENSSFOG00015003609	nmd3	79	76.942	ENSCAPG00000017861	NMD3	93	76.942	Cavia_aperea
ENSSFOG00015003609	nmd3	87	77.117	ENSCPOG00000005953	NMD3	94	77.117	Cavia_porcellus
ENSSFOG00015003609	nmd3	99	77.381	ENSCCAG00000037460	NMD3	100	77.381	Cebus_capucinus
ENSSFOG00015003609	nmd3	99	77.381	ENSCATG00000030022	NMD3	100	77.381	Cercocebus_atys
ENSSFOG00015003609	nmd3	99	77.381	ENSCLAG00000003155	NMD3	100	77.381	Chinchilla_lanigera
ENSSFOG00015003609	nmd3	99	77.579	ENSCSAG00000012333	NMD3	100	77.579	Chlorocebus_sabaeus
ENSSFOG00015003609	nmd3	80	76.761	ENSCHOG00000001240	NMD3	80	76.761	Choloepus_hoffmanni
ENSSFOG00015003609	nmd3	99	81.746	ENSCPBG00000018318	NMD3	99	82.489	Chrysemys_picta_bellii
ENSSFOG00015003609	nmd3	97	54.675	ENSCING00000002129	-	97	54.675	Ciona_intestinalis
ENSSFOG00015003609	nmd3	87	53.864	ENSCSAVG00000001120	-	97	53.864	Ciona_savignyi
ENSSFOG00015003609	nmd3	99	71.571	ENSCANG00000042939	NMD3	95	71.173	Colobus_angolensis_palliatus
ENSSFOG00015003609	nmd3	91	68.113	ENSCGRG00001001792	Nmd3	97	68.113	Cricetulus_griseus_chok1gshd
ENSSFOG00015003609	nmd3	97	76.986	ENSCGRG00000007947	Nmd3	98	76.986	Cricetulus_griseus_crigri
ENSSFOG00015003609	nmd3	100	89.484	ENSCSEG00000017954	nmd3	100	89.484	Cynoglossus_semilaevis
ENSSFOG00015003609	nmd3	100	80.952	ENSCVAG00000004672	nmd3	100	80.952	Cyprinodon_variegatus
ENSSFOG00015003609	nmd3	100	87.525	ENSDARG00000015676	nmd3	100	87.525	Danio_rerio
ENSSFOG00015003609	nmd3	99	76.190	ENSDNOG00000045222	NMD3	100	76.190	Dasypus_novemcinctus
ENSSFOG00015003609	nmd3	91	79.104	ENSDORG00000005716	Nmd3	100	79.104	Dipodomys_ordii
ENSSFOG00015003609	nmd3	98	53.908	FBgn0023542	Nmd3	95	53.106	Drosophila_melanogaster
ENSSFOG00015003609	nmd3	99	66.270	ENSETEG00000003168	NMD3	99	66.270	Echinops_telfairi
ENSSFOG00015003609	nmd3	89	57.906	ENSEBUG00000014316	nmd3	97	57.906	Eptatretus_burgeri
ENSSFOG00015003609	nmd3	99	77.381	ENSEASG00005018672	NMD3	100	77.381	Equus_asinus_asinus
ENSSFOG00015003609	nmd3	99	77.711	ENSECAG00000000188	NMD3	97	77.823	Equus_caballus
ENSSFOG00015003609	nmd3	94	56.356	ENSEEUG00000010642	-	100	56.356	Erinaceus_europaeus
ENSSFOG00015003609	nmd3	100	87.897	ENSELUG00000024123	nmd3	100	87.897	Esox_lucius
ENSSFOG00015003609	nmd3	99	77.711	ENSFCAG00000022867	NMD3	99	77.579	Felis_catus
ENSSFOG00015003609	nmd3	94	80.421	ENSFALG00000008711	NMD3	100	80.421	Ficedula_albicollis
ENSSFOG00015003609	nmd3	97	64.097	ENSFDAG00000012197	-	98	64.476	Fukomys_damarensis
ENSSFOG00015003609	nmd3	99	76.436	ENSFDAG00000013724	-	100	76.436	Fukomys_damarensis
ENSSFOG00015003609	nmd3	100	87.698	ENSFHEG00000000415	nmd3	100	87.698	Fundulus_heteroclitus
ENSSFOG00015003609	nmd3	97	84.254	ENSGMOG00000009675	nmd3	100	84.254	Gadus_morhua
ENSSFOG00015003609	nmd3	100	79.604	ENSGALG00000009533	NMD3	100	79.604	Gallus_gallus
ENSSFOG00015003609	nmd3	99	88.732	ENSGAFG00000012798	nmd3	94	88.732	Gambusia_affinis
ENSSFOG00015003609	nmd3	100	86.508	ENSGACG00000010028	nmd3	100	86.508	Gasterosteus_aculeatus
ENSSFOG00015003609	nmd3	99	81.349	ENSGAGG00000006556	NMD3	99	81.349	Gopherus_agassizii
ENSSFOG00015003609	nmd3	99	63.221	ENSGGOG00000028590	-	99	63.221	Gorilla_gorilla
ENSSFOG00015003609	nmd3	99	77.381	ENSGGOG00000007157	NMD3	100	77.381	Gorilla_gorilla
ENSSFOG00015003609	nmd3	100	90.476	ENSHBUG00000001781	nmd3	100	90.476	Haplochromis_burtoni
ENSSFOG00015003609	nmd3	99	77.183	ENSHGLG00000014451	-	100	77.183	Heterocephalus_glaber_female
ENSSFOG00015003609	nmd3	99	63.690	ENSHGLG00000010477	-	100	63.690	Heterocephalus_glaber_female
ENSSFOG00015003609	nmd3	99	63.690	ENSHGLG00100001042	-	100	63.294	Heterocephalus_glaber_male
ENSSFOG00015003609	nmd3	99	77.183	ENSHGLG00100006613	-	100	77.183	Heterocephalus_glaber_male
ENSSFOG00015003609	nmd3	99	87.052	ENSHCOG00000004292	nmd3	92	87.052	Hippocampus_comes
ENSSFOG00015003609	nmd3	100	87.103	ENSIPUG00000005073	nmd3	100	87.103	Ictalurus_punctatus
ENSSFOG00015003609	nmd3	99	77.778	ENSSTOG00000001899	NMD3	100	77.778	Ictidomys_tridecemlineatus
ENSSFOG00015003609	nmd3	97	78.732	ENSJJAG00000019759	Nmd3	99	78.732	Jaculus_jaculus
ENSSFOG00015003609	nmd3	100	88.095	ENSKMAG00000020427	nmd3	100	88.095	Kryptolebias_marmoratus
ENSSFOG00015003609	nmd3	100	87.945	ENSLBEG00000022216	nmd3	100	87.945	Labrus_bergylta
ENSSFOG00015003609	nmd3	99	77.555	ENSLACG00000005731	NMD3	99	81.465	Latimeria_chalumnae
ENSSFOG00015003609	nmd3	100	88.119	ENSLOCG00000003561	nmd3	100	88.119	Lepisosteus_oculatus
ENSSFOG00015003609	nmd3	99	75.842	ENSLAFG00000007231	NMD3	100	75.842	Loxodonta_africana
ENSSFOG00015003609	nmd3	99	77.183	ENSMFAG00000040934	NMD3	100	77.183	Macaca_fascicularis
ENSSFOG00015003609	nmd3	99	76.342	ENSMMUG00000009564	NMD3	99	76.603	Macaca_mulatta
ENSSFOG00015003609	nmd3	99	77.183	ENSMNEG00000034626	NMD3	100	77.183	Macaca_nemestrina
ENSSFOG00015003609	nmd3	88	78.378	ENSMLEG00000002741	NMD3	100	78.378	Mandrillus_leucophaeus
ENSSFOG00015003609	nmd3	100	89.484	ENSMAMG00000012427	nmd3	100	89.484	Mastacembelus_armatus
ENSSFOG00015003609	nmd3	100	90.476	ENSMZEG00005016888	nmd3	100	90.476	Maylandia_zebra
ENSSFOG00015003609	nmd3	100	79.604	ENSMGAG00000010498	NMD3	100	79.604	Meleagris_gallopavo
ENSSFOG00015003609	nmd3	99	76.190	ENSMAUG00000000633	Nmd3	100	76.190	Mesocricetus_auratus
ENSSFOG00015003609	nmd3	99	76.984	ENSMICG00000049196	NMD3	100	76.984	Microcebus_murinus
ENSSFOG00015003609	nmd3	99	75.746	ENSMOCG00000005180	Nmd3	100	75.746	Microtus_ochrogaster
ENSSFOG00015003609	nmd3	100	87.723	ENSMMOG00000012765	nmd3	100	87.723	Mola_mola
ENSSFOG00015003609	nmd3	99	61.850	ENSMODG00000016296	NMD3	100	62.741	Monodelphis_domestica
ENSSFOG00015003609	nmd3	100	90.873	ENSMALG00000009256	nmd3	100	90.873	Monopterus_albus
ENSSFOG00015003609	nmd3	99	75.595	MGP_CAROLIEiJ_G0025069	Nmd3	100	75.595	Mus_caroli
ENSSFOG00015003609	nmd3	99	75.595	ENSMUSG00000027787	Nmd3	100	75.595	Mus_musculus
ENSSFOG00015003609	nmd3	99	75.595	MGP_PahariEiJ_G0026512	Nmd3	100	75.595	Mus_pahari
ENSSFOG00015003609	nmd3	99	75.794	MGP_SPRETEiJ_G0026011	Nmd3	100	75.794	Mus_spretus
ENSSFOG00015003609	nmd3	99	77.381	ENSMPUG00000002955	NMD3	99	77.381	Mustela_putorius_furo
ENSSFOG00015003609	nmd3	97	74.390	ENSMLUG00000000701	NMD3	97	74.390	Myotis_lucifugus
ENSSFOG00015003609	nmd3	99	76.342	ENSNGAG00000012307	Nmd3	99	76.342	Nannospalax_galili
ENSSFOG00015003609	nmd3	100	89.881	ENSNBRG00000003324	nmd3	100	89.881	Neolamprologus_brichardi
ENSSFOG00015003609	nmd3	99	77.183	ENSNLEG00000004655	NMD3	100	77.183	Nomascus_leucogenys
ENSSFOG00015003609	nmd3	73	70.175	ENSOPRG00000007690	-	73	70.175	Ochotona_princeps
ENSSFOG00015003609	nmd3	99	77.183	ENSODEG00000006270	NMD3	100	77.183	Octodon_degus
ENSSFOG00015003609	nmd3	100	91.071	ENSONIG00000003643	nmd3	100	91.071	Oreochromis_niloticus
ENSSFOG00015003609	nmd3	99	76.447	ENSOCUG00000017454	NMD3	100	76.447	Oryctolagus_cuniculus
ENSSFOG00015003609	nmd3	100	89.087	ENSORLG00000006279	nmd3	100	89.087	Oryzias_latipes
ENSSFOG00015003609	nmd3	100	88.889	ENSORLG00020003843	nmd3	100	88.889	Oryzias_latipes_hni
ENSSFOG00015003609	nmd3	100	88.492	ENSORLG00015006379	nmd3	100	88.492	Oryzias_latipes_hsok
ENSSFOG00015003609	nmd3	100	89.683	ENSOMEG00000012144	nmd3	100	89.683	Oryzias_melastigma
ENSSFOG00015003609	nmd3	99	76.786	ENSOGAG00000014910	NMD3	100	76.786	Otolemur_garnettii
ENSSFOG00015003609	nmd3	99	76.800	ENSOARG00000001883	NMD3	97	76.800	Ovis_aries
ENSSFOG00015003609	nmd3	99	76.984	ENSPPAG00000043829	NMD3	100	76.984	Pan_paniscus
ENSSFOG00015003609	nmd3	99	77.756	ENSPPRG00000000724	NMD3	97	78.024	Panthera_pardus
ENSSFOG00015003609	nmd3	99	77.381	ENSPTIG00000016761	NMD3	99	77.381	Panthera_tigris_altaica
ENSSFOG00015003609	nmd3	99	76.984	ENSPTRG00000015586	NMD3	100	76.984	Pan_troglodytes
ENSSFOG00015003609	nmd3	99	76.541	ENSPANG00000006665	NMD3	95	76.541	Papio_anubis
ENSSFOG00015003609	nmd3	100	89.484	ENSPKIG00000009928	nmd3	100	89.484	Paramormyrops_kingsleyae
ENSSFOG00015003609	nmd3	100	81.386	ENSPSIG00000007591	NMD3	100	81.386	Pelodiscus_sinensis
ENSSFOG00015003609	nmd3	100	84.325	ENSPMGG00000014015	nmd3	100	84.325	Periophthalmus_magnuspinnatus
ENSSFOG00015003609	nmd3	99	76.389	ENSPEMG00000021880	Nmd3	100	76.389	Peromyscus_maniculatus_bairdii
ENSSFOG00015003609	nmd3	99	79.762	ENSPCIG00000020869	NMD3	100	79.762	Phascolarctos_cinereus
ENSSFOG00015003609	nmd3	100	89.087	ENSPFOG00000012103	nmd3	100	89.087	Poecilia_formosa
ENSSFOG00015003609	nmd3	100	89.286	ENSPLAG00000008087	nmd3	100	89.286	Poecilia_latipinna
ENSSFOG00015003609	nmd3	100	89.087	ENSPMEG00000008506	nmd3	100	89.087	Poecilia_mexicana
ENSSFOG00015003609	nmd3	100	89.286	ENSPREG00000001848	nmd3	100	89.286	Poecilia_reticulata
ENSSFOG00015003609	nmd3	99	77.183	ENSPPYG00000014263	NMD3	100	77.183	Pongo_abelii
ENSSFOG00015003609	nmd3	91	63.913	ENSPCAG00000009851	NMD3	100	63.913	Procavia_capensis
ENSSFOG00015003609	nmd3	85	72.269	ENSPVAG00000003301	NMD3	85	72.269	Pteropus_vampyrus
ENSSFOG00015003609	nmd3	100	90.278	ENSPNYG00000006778	nmd3	100	90.278	Pundamilia_nyererei
ENSSFOG00015003609	nmd3	100	90.675	ENSPNAG00000009442	nmd3	100	90.675	Pygocentrus_nattereri
ENSSFOG00015003609	nmd3	99	75.595	ENSRNOG00000009310	Nmd3	100	75.595	Rattus_norvegicus
ENSSFOG00015003609	nmd3	99	73.214	ENSRBIG00000040379	NMD3	100	73.214	Rhinopithecus_bieti
ENSSFOG00015003609	nmd3	99	76.984	ENSRROG00000036181	NMD3	100	76.984	Rhinopithecus_roxellana
ENSSFOG00015003609	nmd3	94	43.058	YHR170W	NMD3	94	43.461	Saccharomyces_cerevisiae
ENSSFOG00015003609	nmd3	99	77.200	ENSSBOG00000024021	NMD3	99	77.200	Saimiri_boliviensis_boliviensis
ENSSFOG00015003609	nmd3	99	74.008	ENSSHAG00000016044	NMD3	100	74.008	Sarcophilus_harrisii
ENSSFOG00015003609	nmd3	100	87.698	ENSSMAG00000012887	nmd3	100	87.698	Scophthalmus_maximus
ENSSFOG00015003609	nmd3	100	90.675	ENSSDUG00000023721	nmd3	100	90.675	Seriola_dumerili
ENSSFOG00015003609	nmd3	100	90.476	ENSSLDG00000006565	nmd3	100	90.476	Seriola_lalandi_dorsalis
ENSSFOG00015003609	nmd3	97	77.914	ENSSARG00000010402	NMD3	99	77.914	Sorex_araneus
ENSSFOG00015003609	nmd3	99	79.600	ENSSPUG00000018791	NMD3	100	79.600	Sphenodon_punctatus
ENSSFOG00015003609	nmd3	100	89.881	ENSSPAG00000014328	nmd3	100	89.881	Stegastes_partitus
ENSSFOG00015003609	nmd3	99	76.506	ENSSSCG00000022952	NMD3	100	76.389	Sus_scrofa
ENSSFOG00015003609	nmd3	91	78.525	ENSTGUG00000015141	-	100	78.525	Taeniopygia_guttata
ENSSFOG00015003609	nmd3	99	79.563	ENSTGUG00000011140	-	100	79.563	Taeniopygia_guttata
ENSSFOG00015003609	nmd3	100	88.294	ENSTRUG00000005958	nmd3	100	88.294	Takifugu_rubripes
ENSSFOG00015003609	nmd3	99	56.151	ENSTBEG00000011783	-	100	56.151	Tupaia_belangeri
ENSSFOG00015003609	nmd3	99	73.016	ENSTTRG00000012938	NMD3	100	73.016	Tursiops_truncatus
ENSSFOG00015003609	nmd3	80	76.866	ENSUAMG00000009305	-	99	76.866	Ursus_americanus
ENSSFOG00015003609	nmd3	99	76.954	ENSUMAG00000011070	NMD3	99	77.016	Ursus_maritimus
ENSSFOG00015003609	nmd3	99	76.389	ENSVPAG00000008779	NMD3	100	76.389	Vicugna_pacos
ENSSFOG00015003609	nmd3	99	77.108	ENSVVUG00000023055	NMD3	99	77.218	Vulpes_vulpes
ENSSFOG00015003609	nmd3	100	81.782	ENSXETG00000027727	nmd3	100	81.782	Xenopus_tropicalis
ENSSFOG00015003609	nmd3	68	86.473	ENSXCOG00000012490	nmd3	84	86.341	Xiphophorus_couchianus
ENSSFOG00015003609	nmd3	100	89.484	ENSXMAG00000018406	nmd3	100	89.484	Xiphophorus_maculatus