EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015003649 (Gene tree)
Gene ID: 108933055
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 15912 bases
Position: chrKV411016.1:4062358-4078269
Accession: 108933055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015005759	ResIII	PF04851.15	1e-09	1	1
ENSSFOP00015005710	ResIII	PF04851.15	1.1e-09	1	1
ENSSFOP00015005736	ResIII	PF04851.15	1.3e-09	1	1
ENSSFOP00015005759	DEAD	PF00270.29	7.9e-06	1	1
ENSSFOP00015005710	DEAD	PF00270.29	9.4e-06	1	1
ENSSFOP00015005736	DEAD	PF00270.29	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015005855	-	2577	-	ENSSFOP00015005759	858 (aa)	-	-
ENSSFOT00015005805	-	3232	XM_018749864	ENSSFOP00015005710	973 (aa)	XP_018605380	-
ENSSFOT00015005831	-	3181	-	ENSSFOP00015005736	1046 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015003649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015003649	chd1l	53	37.965	ENSSFOG00015020909	smarcad1a	69	37.665
ENSSFOG00015003649	chd1l	59	43.130	ENSSFOG00015017895	hells	71	38.246
ENSSFOG00015003649	chd1l	53	33.932	ENSSFOG00015008483	rad54b	77	33.932
ENSSFOG00015003649	chd1l	63	44.765	ENSSFOG00015009043	smarca1	54	44.765
ENSSFOG00015003649	chd1l	63	44.465	ENSSFOG00015016794	smarca5	56	44.607
ENSSFOG00015003649	chd1l	53	38.012	ENSSFOG00015016814	smarcad1b	51	37.476
ENSSFOG00015003649	chd1l	63	44.928	ENSSFOG00015013252	SMARCA5	53	44.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003649	chd1l	96	65.684	ENSG00000131778	CHD1L	97	67.828	Homo_sapiens
ENSSFOG00015003649	chd1l	98	71.165	ENSAPOG00000001539	chd1l	99	72.654	Acanthochromis_polyacanthus
ENSSFOG00015003649	chd1l	99	64.351	ENSAMEG00000017063	CHD1L	95	67.249	Ailuropoda_melanoleuca
ENSSFOG00015003649	chd1l	96	72.216	ENSACIG00000001164	chd1l	99	72.831	Amphilophus_citrinellus
ENSSFOG00015003649	chd1l	98	71.231	ENSAOCG00000014510	chd1l	93	69.958	Amphiprion_ocellaris
ENSSFOG00015003649	chd1l	98	68.585	ENSAPEG00000017573	chd1l	96	69.600	Amphiprion_percula
ENSSFOG00015003649	chd1l	98	67.972	ENSAPEG00000017450	chd1l	95	70.046	Amphiprion_percula
ENSSFOG00015003649	chd1l	98	71.149	ENSATEG00000013058	chd1l	94	71.982	Anabas_testudineus
ENSSFOG00015003649	chd1l	95	63.496	ENSAPLG00000009976	CHD1L	94	65.684	Anas_platyrhynchos
ENSSFOG00015003649	chd1l	96	61.060	ENSACAG00000017686	CHD1L	96	62.500	Anolis_carolinensis
ENSSFOG00015003649	chd1l	99	63.968	ENSANAG00000024347	CHD1L	94	67.213	Aotus_nancymaae
ENSSFOG00015003649	chd1l	98	71.264	ENSACLG00000019304	chd1l	97	71.348	Astatotilapia_calliptera
ENSSFOG00015003649	chd1l	98	63.815	ENSAMXG00000012367	chd1l	94	63.080	Astyanax_mexicanus
ENSSFOG00015003649	chd1l	99	64.188	ENSBTAG00000020831	CHD1L	97	65.943	Bos_taurus
ENSSFOG00015003649	chd1l	99	64.505	ENSCJAG00000002406	CHD1L	95	67.483	Callithrix_jacchus
ENSSFOG00015003649	chd1l	99	61.231	ENSCAFG00000010944	CHD1L	97	63.272	Canis_familiaris
ENSSFOG00015003649	chd1l	98	63.647	ENSCAFG00020020121	CHD1L	97	65.525	Canis_lupus_dingo
ENSSFOG00015003649	chd1l	96	64.906	ENSCHIG00000013871	CHD1L	96	66.279	Capra_hircus
ENSSFOG00015003649	chd1l	94	65.066	ENSTSYG00000003005	CHD1L	98	66.706	Carlito_syrichta
ENSSFOG00015003649	chd1l	97	62.558	ENSCPOG00000009000	CHD1L	97	64.171	Cavia_porcellus
ENSSFOG00015003649	chd1l	99	61.486	ENSCCAG00000036079	CHD1L	96	63.867	Cebus_capucinus
ENSSFOG00015003649	chd1l	99	64.000	ENSCATG00000031044	CHD1L	97	65.831	Cercocebus_atys
ENSSFOG00015003649	chd1l	97	64.988	ENSCLAG00000000880	CHD1L	98	65.411	Chinchilla_lanigera
ENSSFOG00015003649	chd1l	99	64.114	ENSCSAG00000018386	CHD1L	97	66.059	Chlorocebus_sabaeus
ENSSFOG00015003649	chd1l	96	65.371	ENSCPBG00000002600	CHD1L	96	67.133	Chrysemys_picta_bellii
ENSSFOG00015003649	chd1l	99	63.056	ENSCANG00000020239	CHD1L	97	64.692	Colobus_angolensis_palliatus
ENSSFOG00015003649	chd1l	97	64.385	ENSCGRG00001021624	Chd1l	99	64.399	Cricetulus_griseus_chok1gshd
ENSSFOG00015003649	chd1l	94	65.114	ENSCGRG00000007554	Chd1l	99	66.231	Cricetulus_griseus_crigri
ENSSFOG00015003649	chd1l	99	68.109	ENSCVAG00000002595	chd1l	97	67.469	Cyprinodon_variegatus
ENSSFOG00015003649	chd1l	98	72.203	ENSDARG00000015471	chd1l	94	70.239	Danio_rerio
ENSSFOG00015003649	chd1l	99	63.481	ENSDNOG00000019504	CHD1L	95	66.086	Dasypus_novemcinctus
ENSSFOG00015003649	chd1l	96	62.266	ENSDORG00000013555	Chd1l	96	63.751	Dipodomys_ordii
ENSSFOG00015003649	chd1l	88	62.271	ENSETEG00000008445	CHD1L	87	63.489	Echinops_telfairi
ENSSFOG00015003649	chd1l	65	69.767	ENSEBUG00000005791	chd1l	74	69.767	Eptatretus_burgeri
ENSSFOG00015003649	chd1l	99	63.730	ENSEASG00005007364	CHD1L	99	67.036	Equus_asinus_asinus
ENSSFOG00015003649	chd1l	99	63.730	ENSECAG00000008915	CHD1L	99	67.036	Equus_caballus
ENSSFOG00015003649	chd1l	98	63.091	ENSELUG00000016844	chd1l	93	60.412	Esox_lucius
ENSSFOG00015003649	chd1l	99	63.128	ENSFCAG00000007777	CHD1L	97	65.411	Felis_catus
ENSSFOG00015003649	chd1l	98	61.839	ENSFALG00000006087	CHD1L	97	63.636	Ficedula_albicollis
ENSSFOG00015003649	chd1l	94	65.030	ENSFDAG00000012431	CHD1L	98	66.982	Fukomys_damarensis
ENSSFOG00015003649	chd1l	98	70.208	ENSFHEG00000012420	chd1l	94	68.980	Fundulus_heteroclitus
ENSSFOG00015003649	chd1l	96	62.191	ENSGALG00000015038	CHD1L	95	63.827	Gallus_gallus
ENSSFOG00015003649	chd1l	98	71.527	ENSGAFG00000018198	chd1l	99	69.266	Gambusia_affinis
ENSSFOG00015003649	chd1l	60	75.634	ENSGACG00000014042	chd1l	98	75.634	Gasterosteus_aculeatus
ENSSFOG00015003649	chd1l	96	65.647	ENSGAGG00000014432	CHD1L	96	67.060	Gopherus_agassizii
ENSSFOG00015003649	chd1l	99	63.688	ENSGGOG00000001067	CHD1L	97	65.486	Gorilla_gorilla
ENSSFOG00015003649	chd1l	98	71.264	ENSHBUG00000007464	chd1l	98	71.804	Haplochromis_burtoni
ENSSFOG00015003649	chd1l	97	63.041	ENSHGLG00000008933	CHD1L	96	64.971	Heterocephalus_glaber_female
ENSSFOG00015003649	chd1l	94	62.081	ENSHGLG00100007155	CHD1L	98	64.294	Heterocephalus_glaber_male
ENSSFOG00015003649	chd1l	98	65.632	ENSHCOG00000012787	chd1l	94	66.935	Hippocampus_comes
ENSSFOG00015003649	chd1l	98	65.780	ENSIPUG00000022617	chd1l	95	63.440	Ictalurus_punctatus
ENSSFOG00015003649	chd1l	97	59.371	ENSSTOG00000007032	CHD1L	98	60.068	Ictidomys_tridecemlineatus
ENSSFOG00015003649	chd1l	98	70.575	ENSKMAG00000014358	chd1l	93	69.675	Kryptolebias_marmoratus
ENSSFOG00015003649	chd1l	98	70.575	ENSLBEG00000023845	chd1l	96	72.242	Labrus_bergylta
ENSSFOG00015003649	chd1l	98	59.729	ENSLACG00000006262	CHD1L	94	59.607	Latimeria_chalumnae
ENSSFOG00015003649	chd1l	98	73.618	ENSLOCG00000010574	chd1l	93	73.228	Lepisosteus_oculatus
ENSSFOG00015003649	chd1l	94	64.531	ENSLAFG00000018136	CHD1L	99	66.157	Loxodonta_africana
ENSSFOG00015003649	chd1l	95	64.558	ENSMFAG00000043562	CHD1L	98	67.568	Macaca_fascicularis
ENSSFOG00015003649	chd1l	99	63.771	ENSMMUG00000009024	CHD1L	97	65.718	Macaca_mulatta
ENSSFOG00015003649	chd1l	99	63.771	ENSMNEG00000039905	CHD1L	97	65.718	Macaca_nemestrina
ENSSFOG00015003649	chd1l	99	64.000	ENSMLEG00000030900	CHD1L	97	65.945	Mandrillus_leucophaeus
ENSSFOG00015003649	chd1l	98	71.692	ENSMAMG00000012822	chd1l	99	71.183	Mastacembelus_armatus
ENSSFOG00015003649	chd1l	98	71.264	ENSMZEG00005020830	chd1l	95	70.359	Maylandia_zebra
ENSSFOG00015003649	chd1l	94	62.799	ENSMGAG00000014304	CHD1L	98	64.573	Meleagris_gallopavo
ENSSFOG00015003649	chd1l	98	64.286	ENSMICG00000002497	CHD1L	97	65.789	Microcebus_murinus
ENSSFOG00015003649	chd1l	97	64.302	ENSMOCG00000006305	Chd1l	98	65.045	Microtus_ochrogaster
ENSSFOG00015003649	chd1l	98	66.972	ENSMMOG00000005964	chd1l	92	68.942	Mola_mola
ENSSFOG00015003649	chd1l	98	63.636	ENSMODG00000018717	CHD1L	98	65.525	Monodelphis_domestica
ENSSFOG00015003649	chd1l	98	71.346	ENSMALG00000014675	chd1l	93	70.168	Monopterus_albus
ENSSFOG00015003649	chd1l	97	64.452	MGP_CAROLIEiJ_G0025401	Chd1l	98	64.571	Mus_caroli
ENSSFOG00015003649	chd1l	98	63.224	ENSMUSG00000028089	Chd1l	96	65.589	Mus_musculus
ENSSFOG00015003649	chd1l	97	64.836	MGP_PahariEiJ_G0026845	Chd1l	97	66.049	Mus_pahari
ENSSFOG00015003649	chd1l	98	63.688	MGP_SPRETEiJ_G0026347	Chd1l	96	65.734	Mus_spretus
ENSSFOG00015003649	chd1l	99	63.574	ENSMPUG00000000615	CHD1L	95	66.393	Mustela_putorius_furo
ENSSFOG00015003649	chd1l	96	63.306	ENSMLUG00000007573	CHD1L	95	64.658	Myotis_lucifugus
ENSSFOG00015003649	chd1l	94	62.188	ENSNGAG00000000908	Chd1l	97	62.907	Nannospalax_galili
ENSSFOG00015003649	chd1l	98	68.000	ENSNBRG00000006021	chd1l	95	69.829	Neolamprologus_brichardi
ENSSFOG00015003649	chd1l	99	63.001	ENSNLEG00000000179	CHD1L	97	64.726	Nomascus_leucogenys
ENSSFOG00015003649	chd1l	94	55.635	ENSOPRG00000006973	CHD1L	99	57.126	Ochotona_princeps
ENSSFOG00015003649	chd1l	98	60.529	ENSODEG00000002494	CHD1L	96	63.499	Octodon_degus
ENSSFOG00015003649	chd1l	98	71.609	ENSONIG00000003183	chd1l	96	70.992	Oreochromis_niloticus
ENSSFOG00015003649	chd1l	87	61.111	ENSOANG00000003068	CHD1L	93	63.049	Ornithorhynchus_anatinus
ENSSFOG00015003649	chd1l	96	62.659	ENSOCUG00000009336	CHD1L	95	62.942	Oryctolagus_cuniculus
ENSSFOG00015003649	chd1l	98	69.045	ENSORLG00000003673	chd1l	95	70.091	Oryzias_latipes
ENSSFOG00015003649	chd1l	98	70.161	ENSORLG00020005123	chd1l	99	68.661	Oryzias_latipes_hni
ENSSFOG00015003649	chd1l	98	70.520	ENSORLG00015001680	chd1l	98	70.541	Oryzias_latipes_hsok
ENSSFOG00015003649	chd1l	75	69.884	ENSOMEG00000006109	chd1l	88	68.280	Oryzias_melastigma
ENSSFOG00015003649	chd1l	99	64.351	ENSOGAG00000008775	CHD1L	97	66.021	Otolemur_garnettii
ENSSFOG00015003649	chd1l	99	63.688	ENSOARG00000020547	CHD1L	98	66.746	Ovis_aries
ENSSFOG00015003649	chd1l	96	64.817	ENSPPAG00000039193	CHD1L	98	67.488	Pan_paniscus
ENSSFOG00015003649	chd1l	99	63.512	ENSPPRG00000010258	CHD1L	97	65.940	Panthera_pardus
ENSSFOG00015003649	chd1l	96	65.802	ENSPTRG00000001220	CHD1L	95	67.173	Pan_troglodytes
ENSSFOG00015003649	chd1l	96	65.330	ENSPANG00000009170	CHD1L	97	65.795	Papio_anubis
ENSSFOG00015003649	chd1l	98	74.596	ENSPKIG00000022166	chd1l	97	75.783	Paramormyrops_kingsleyae
ENSSFOG00015003649	chd1l	98	63.770	ENSPSIG00000012595	CHD1L	95	67.135	Pelodiscus_sinensis
ENSSFOG00015003649	chd1l	98	62.543	ENSPEMG00000013528	Chd1l	98	64.813	Peromyscus_maniculatus_bairdii
ENSSFOG00015003649	chd1l	91	64.552	ENSPCIG00000030409	CHD1L	98	66.213	Phascolarctos_cinereus
ENSSFOG00015003649	chd1l	98	70.853	ENSPFOG00000015948	chd1l	94	69.643	Poecilia_formosa
ENSSFOG00015003649	chd1l	98	70.872	ENSPLAG00000015145	chd1l	98	70.488	Poecilia_latipinna
ENSSFOG00015003649	chd1l	98	70.426	ENSPMEG00000008720	chd1l	100	69.271	Poecilia_mexicana
ENSSFOG00015003649	chd1l	98	69.444	ENSPREG00000017885	chd1l	98	70.434	Poecilia_reticulata
ENSSFOG00015003649	chd1l	99	64.229	ENSPPYG00000000946	CHD1L	96	66.859	Pongo_abelii
ENSSFOG00015003649	chd1l	91	58.148	ENSPCAG00000005959	CHD1L	96	57.474	Procavia_capensis
ENSSFOG00015003649	chd1l	94	61.511	ENSPVAG00000006084	CHD1L	99	62.782	Pteropus_vampyrus
ENSSFOG00015003649	chd1l	98	70.434	ENSPNYG00000013001	chd1l	97	71.918	Pundamilia_nyererei
ENSSFOG00015003649	chd1l	98	72.286	ENSPNAG00000011881	chd1l	95	70.010	Pygocentrus_nattereri
ENSSFOG00015003649	chd1l	98	64.147	ENSRNOG00000017669	Chd1l	98	65.607	Rattus_norvegicus
ENSSFOG00015003649	chd1l	99	63.056	ENSRBIG00000041272	CHD1L	95	65.970	Rhinopithecus_bieti
ENSSFOG00015003649	chd1l	99	63.212	ENSRROG00000041354	CHD1L	96	65.771	Rhinopithecus_roxellana
ENSSFOG00015003649	chd1l	98	62.903	ENSSHAG00000017395	CHD1L	97	64.686	Sarcophilus_harrisii
ENSSFOG00015003649	chd1l	99	67.308	ENSSMAG00000019377	chd1l	96	68.879	Scophthalmus_maximus
ENSSFOG00015003649	chd1l	96	71.513	ENSSDUG00000019831	chd1l	95	72.931	Seriola_dumerili
ENSSFOG00015003649	chd1l	96	70.975	ENSSLDG00000012714	chd1l	95	72.150	Seriola_lalandi_dorsalis
ENSSFOG00015003649	chd1l	96	63.102	ENSSPUG00000016865	CHD1L	97	64.774	Sphenodon_punctatus
ENSSFOG00015003649	chd1l	98	71.692	ENSSPAG00000017653	chd1l	99	70.231	Stegastes_partitus
ENSSFOG00015003649	chd1l	98	62.514	ENSSSCG00000006701	CHD1L	98	64.343	Sus_scrofa
ENSSFOG00015003649	chd1l	96	63.369	ENSTGUG00000013392	-	99	65.116	Taeniopygia_guttata
ENSSFOG00015003649	chd1l	96	62.884	ENSTNIG00000004902	chd1l	99	62.867	Tetraodon_nigroviridis
ENSSFOG00015003649	chd1l	94	61.271	ENSTTRG00000011711	CHD1L	98	62.945	Tursiops_truncatus
ENSSFOG00015003649	chd1l	99	64.123	ENSUAMG00000021991	CHD1L	96	66.782	Ursus_americanus
ENSSFOG00015003649	chd1l	99	64.009	ENSUMAG00000009733	CHD1L	96	66.986	Ursus_maritimus
ENSSFOG00015003649	chd1l	98	63.158	ENSVVUG00000007316	CHD1L	92	65.103	Vulpes_vulpes
ENSSFOG00015003649	chd1l	98	68.318	ENSXCOG00000008336	chd1l	93	67.194	Xiphophorus_couchianus
ENSSFOG00015003649	chd1l	98	71.857	ENSXMAG00000015898	chd1l	94	70.811	Xiphophorus_maculatus