EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015003678 (Gene tree)
Gene ID: -
Gene Symbol: alyref (1 of many)
Alias: -
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 1588 bases
Position: chrKV410796.1:444611-446198
Accession: ZDB-GENE-070928-29
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015005641	RRM_1	PF00076.22	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015005734	-	657	-	ENSSFOP00015005641	218 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015003678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003678's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015003678	alyref	86	79.365	ENSSFOG00015003923	alyref	72	80.423

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003678	alyref	92	55.122	ENSAPOG00000000183	-	81	53.738	Acanthochromis_polyacanthus
ENSSFOG00015003678	alyref	85	69.744	ENSACIG00000006351	alyref	70	75.385	Amphilophus_citrinellus
ENSSFOG00015003678	alyref	88	51.163	ENSACIG00000020351	-	81	52.968	Amphilophus_citrinellus
ENSSFOG00015003678	alyref	83	69.110	ENSAOCG00000014012	alyref	70	76.963	Amphiprion_ocellaris
ENSSFOG00015003678	alyref	92	57.426	ENSAOCG00000019305	-	81	53.953	Amphiprion_ocellaris
ENSSFOG00015003678	alyref	83	69.634	ENSAPEG00000014603	alyref	70	76.963	Amphiprion_percula
ENSSFOG00015003678	alyref	83	61.538	ENSAPEG00000013527	-	81	53.953	Amphiprion_percula
ENSSFOG00015003678	alyref	83	60.541	ENSATEG00000000382	-	71	60.541	Anabas_testudineus
ENSSFOG00015003678	alyref	83	67.692	ENSATEG00000004307	alyref	70	73.846	Anabas_testudineus
ENSSFOG00015003678	alyref	61	78.676	ENSAPLG00000014745	-	99	80.147	Anas_platyrhynchos
ENSSFOG00015003678	alyref	83	59.067	ENSACLG00000010184	-	73	58.376	Astatotilapia_calliptera
ENSSFOG00015003678	alyref	83	68.750	ENSACLG00000008432	alyref	70	76.042	Astatotilapia_calliptera
ENSSFOG00015003678	alyref	83	73.958	ENSAMXG00000007359	alyref	69	78.646	Astyanax_mexicanus
ENSSFOG00015003678	alyref	82	47.668	ENSCING00000013568	-	72	48.020	Ciona_intestinalis
ENSSFOG00015003678	alyref	84	48.148	ENSCSAVG00000003324	-	71	50.259	Ciona_savignyi
ENSSFOG00015003678	alyref	83	74.211	ENSCSEG00000017800	alyref	70	76.963	Cynoglossus_semilaevis
ENSSFOG00015003678	alyref	83	73.936	ENSCVAG00000014869	alyref	70	76.596	Cyprinodon_variegatus
ENSSFOG00015003678	alyref	83	53.333	ENSCVAG00000007789	-	70	53.552	Cyprinodon_variegatus
ENSSFOG00015003678	alyref	83	78.125	ENSDARG00000077732	alyref	68	79.167	Danio_rerio
ENSSFOG00015003678	alyref	89	48.077	FBgn0010774	Ref1	75	46.377	Drosophila_melanogaster
ENSSFOG00015003678	alyref	84	55.135	ENSEBUG00000008253	alyref	66	58.378	Eptatretus_burgeri
ENSSFOG00015003678	alyref	83	44.792	ENSEBUG00000006305	alyref	79	46.114	Eptatretus_burgeri
ENSSFOG00015003678	alyref	83	64.615	ENSELUG00000008849	-	76	68.205	Esox_lucius
ENSSFOG00015003678	alyref	83	76.757	ENSELUG00000017178	alyref	69	81.183	Esox_lucius
ENSSFOG00015003678	alyref	71	81.132	ENSFALG00000011923	-	99	83.019	Ficedula_albicollis
ENSSFOG00015003678	alyref	83	75.676	ENSFHEG00000019426	alyref	69	77.419	Fundulus_heteroclitus
ENSSFOG00015003678	alyref	83	53.333	ENSFHEG00000004698	-	70	53.552	Fundulus_heteroclitus
ENSSFOG00015003678	alyref	83	70.430	ENSGMOG00000009882	alyref	69	66.667	Gadus_morhua
ENSSFOG00015003678	alyref	83	60.938	ENSGMOG00000013122	-	100	61.979	Gadus_morhua
ENSSFOG00015003678	alyref	83	52.222	ENSGAFG00000007573	-	69	52.222	Gambusia_affinis
ENSSFOG00015003678	alyref	83	73.913	ENSGAFG00000006014	alyref	68	76.630	Gambusia_affinis
ENSSFOG00015003678	alyref	83	68.750	ENSHBUG00000020196	alyref	70	76.042	Haplochromis_burtoni
ENSSFOG00015003678	alyref	83	58.974	ENSHBUG00000001454	-	73	60.406	Haplochromis_burtoni
ENSSFOG00015003678	alyref	83	56.614	ENSHCOG00000012825	-	73	53.403	Hippocampus_comes
ENSSFOG00015003678	alyref	83	80.108	ENSIPUG00000009469	alyref	69	79.474	Ictalurus_punctatus
ENSSFOG00015003678	alyref	84	67.935	ENSSTOG00000016570	-	91	72.826	Ictidomys_tridecemlineatus
ENSSFOG00015003678	alyref	83	76.440	ENSKMAG00000008912	alyref	70	76.440	Kryptolebias_marmoratus
ENSSFOG00015003678	alyref	83	55.801	ENSKMAG00000006462	-	70	52.632	Kryptolebias_marmoratus
ENSSFOG00015003678	alyref	84	70.000	ENSLBEG00000023118	alyref	67	76.720	Labrus_bergylta
ENSSFOG00015003678	alyref	83	55.440	ENSLBEG00000012930	-	74	50.490	Labrus_bergylta
ENSSFOG00015003678	alyref	83	52.174	ENSLBEG00000005387	-	76	50.935	Labrus_bergylta
ENSSFOG00015003678	alyref	67	82.468	ENSLOCG00000013879	alyref	67	84.568	Lepisosteus_oculatus
ENSSFOG00015003678	alyref	83	71.875	ENSMAMG00000003034	alyref	70	77.604	Mastacembelus_armatus
ENSSFOG00015003678	alyref	83	55.676	ENSMAMG00000005464	-	72	52.821	Mastacembelus_armatus
ENSSFOG00015003678	alyref	83	58.549	ENSMZEG00005012096	-	73	57.868	Maylandia_zebra
ENSSFOG00015003678	alyref	83	68.750	ENSMZEG00005008639	alyref	70	76.042	Maylandia_zebra
ENSSFOG00015003678	alyref	83	54.945	ENSMMOG00000007032	-	76	53.968	Mola_mola
ENSSFOG00015003678	alyref	83	73.936	ENSMMOG00000012458	alyref	68	79.787	Mola_mola
ENSSFOG00015003678	alyref	83	57.653	ENSMALG00000006054	-	74	57.292	Monopterus_albus
ENSSFOG00015003678	alyref	83	69.444	ENSMLUG00000006521	-	73	66.332	Myotis_lucifugus
ENSSFOG00015003678	alyref	83	72.222	ENSMLUG00000004098	-	67	72.222	Myotis_lucifugus
ENSSFOG00015003678	alyref	83	59.140	ENSMLUG00000028605	-	65	59.043	Myotis_lucifugus
ENSSFOG00015003678	alyref	83	58.115	ENSMLUG00000009247	-	69	58.115	Myotis_lucifugus
ENSSFOG00015003678	alyref	82	72.626	ENSMLUG00000014372	-	65	72.626	Myotis_lucifugus
ENSSFOG00015003678	alyref	83	61.111	ENSMLUG00000030671	-	65	61.111	Myotis_lucifugus
ENSSFOG00015003678	alyref	83	58.247	ENSMLUG00000022467	-	67	58.549	Myotis_lucifugus
ENSSFOG00015003678	alyref	83	58.919	ENSMLUG00000022178	-	67	58.919	Myotis_lucifugus
ENSSFOG00015003678	alyref	83	80.328	ENSNGAG00000022014	-	83	75.385	Nannospalax_galili
ENSSFOG00015003678	alyref	83	58.462	ENSNBRG00000017460	-	75	57.789	Neolamprologus_brichardi
ENSSFOG00015003678	alyref	83	68.750	ENSNBRG00000001747	alyref	69	76.042	Neolamprologus_brichardi
ENSSFOG00015003678	alyref	83	69.744	ENSONIG00000019434	alyref	70	74.359	Oreochromis_niloticus
ENSSFOG00015003678	alyref	83	61.702	ENSONIG00000003296	-	72	57.500	Oreochromis_niloticus
ENSSFOG00015003678	alyref	83	71.658	ENSORLG00020011942	alyref	69	74.603	Oryzias_latipes_hni
ENSSFOG00015003678	alyref	83	51.323	ENSORLG00020015673	-	73	50.000	Oryzias_latipes_hni
ENSSFOG00015003678	alyref	83	71.658	ENSORLG00015022664	alyref	69	74.603	Oryzias_latipes_hsok
ENSSFOG00015003678	alyref	83	49.738	ENSORLG00015015143	-	73	50.510	Oryzias_latipes_hsok
ENSSFOG00015003678	alyref	83	53.804	ENSOMEG00000007158	-	72	52.551	Oryzias_melastigma
ENSSFOG00015003678	alyref	83	72.043	ENSOMEG00000019176	alyref	69	74.468	Oryzias_melastigma
ENSSFOG00015003678	alyref	86	78.836	ENSPPAG00000036403	-	70	82.105	Pan_paniscus
ENSSFOG00015003678	alyref	83	79.891	ENSPKIG00000007070	alyref	67	79.891	Paramormyrops_kingsleyae
ENSSFOG00015003678	alyref	83	76.882	ENSPKIG00000006233	-	58	77.957	Paramormyrops_kingsleyae
ENSSFOG00015003678	alyref	84	71.579	ENSPMGG00000016600	alyref	64	76.842	Periophthalmus_magnuspinnatus
ENSSFOG00015003678	alyref	84	80.435	ENSPEMG00000016628	-	79	80.328	Peromyscus_maniculatus_bairdii
ENSSFOG00015003678	alyref	83	52.486	ENSPFOG00000017094	-	70	52.717	Poecilia_formosa
ENSSFOG00015003678	alyref	83	72.432	ENSPFOG00000022825	alyref	67	73.404	Poecilia_formosa
ENSSFOG00015003678	alyref	83	72.432	ENSPLAG00000006948	alyref	68	73.404	Poecilia_latipinna
ENSSFOG00015003678	alyref	83	52.486	ENSPLAG00000014380	-	70	52.717	Poecilia_latipinna
ENSSFOG00015003678	alyref	83	52.486	ENSPMEG00000023039	-	70	52.717	Poecilia_mexicana
ENSSFOG00015003678	alyref	83	72.973	ENSPMEG00000003547	alyref	68	73.404	Poecilia_mexicana
ENSSFOG00015003678	alyref	83	53.846	ENSPREG00000003649	-	72	49.744	Poecilia_reticulata
ENSSFOG00015003678	alyref	83	72.432	ENSPREG00000015795	alyref	68	73.936	Poecilia_reticulata
ENSSFOG00015003678	alyref	83	68.750	ENSPNYG00000017498	alyref	70	76.042	Pundamilia_nyererei
ENSSFOG00015003678	alyref	83	56.410	ENSPNYG00000002879	-	74	52.174	Pundamilia_nyererei
ENSSFOG00015003678	alyref	83	79.365	ENSPNAG00000002531	alyref	69	79.894	Pygocentrus_nattereri
ENSSFOG00015003678	alyref	83	80.874	ENSSBOG00000030924	-	83	82.609	Saimiri_boliviensis_boliviensis
ENSSFOG00015003678	alyref	83	65.385	ENSSHAG00000012866	-	69	65.385	Sarcophilus_harrisii
ENSSFOG00015003678	alyref	83	63.536	ENSSHAG00000000609	-	77	67.403	Sarcophilus_harrisii
ENSSFOG00015003678	alyref	83	56.995	ENSSMAG00000011169	-	73	56.995	Scophthalmus_maximus
ENSSFOG00015003678	alyref	83	69.841	ENSSMAG00000009283	alyref	69	78.307	Scophthalmus_maximus
ENSSFOG00015003678	alyref	83	68.586	ENSSDUG00000016158	alyref	70	76.440	Seriola_dumerili
ENSSFOG00015003678	alyref	83	70.312	ENSSLDG00000017803	alyref	70	77.604	Seriola_lalandi_dorsalis
ENSSFOG00015003678	alyref	85	61.053	ENSSPAG00000017028	-	81	54.054	Stegastes_partitus
ENSSFOG00015003678	alyref	88	54.854	ENSTRUG00000003051	-	78	54.950	Takifugu_rubripes
ENSSFOG00015003678	alyref	83	73.575	ENSTNIG00000011595	alyref	79	73.711	Tetraodon_nigroviridis
ENSSFOG00015003678	alyref	83	59.459	ENSTNIG00000014136	-	72	53.030	Tetraodon_nigroviridis
ENSSFOG00015003678	alyref	84	79.032	ENSVVUG00000000272	-	82	81.283	Vulpes_vulpes
ENSSFOG00015003678	alyref	83	73.370	ENSXCOG00000018047	alyref	67	76.087	Xiphophorus_couchianus
ENSSFOG00015003678	alyref	83	53.333	ENSXMAG00000018086	-	72	53.514	Xiphophorus_maculatus
ENSSFOG00015003678	alyref	83	73.913	ENSXMAG00000012218	alyref	67	76.630	Xiphophorus_maculatus