EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015003881 (Gene tree)
Gene ID: 108933718
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 21402 bases
Position: chrKV411038.1:7156700-7178101
Accession: 108933718
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015005950	Suf	PF05843.14	2.1e-12	1	2
ENSSFOP00015005950	Suf	PF05843.14	2.1e-12	2	2
ENSSFOP00015005973	Suf	PF05843.14	2.1e-12	1	2
ENSSFOP00015005973	Suf	PF05843.14	2.1e-12	2	2
ENSSFOP00015005950	S1	PF00575.23	5.7e-59	1	4
ENSSFOP00015005950	S1	PF00575.23	5.7e-59	2	4
ENSSFOP00015005950	S1	PF00575.23	5.7e-59	3	4
ENSSFOP00015005950	S1	PF00575.23	5.7e-59	4	4
ENSSFOP00015005973	S1	PF00575.23	5.7e-59	1	4
ENSSFOP00015005973	S1	PF00575.23	5.7e-59	2	4
ENSSFOP00015005973	S1	PF00575.23	5.7e-59	3	4
ENSSFOP00015005973	S1	PF00575.23	5.7e-59	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015006070	-	5558	-	ENSSFOP00015005973	1796 (aa)	-	A0A1W4ZZV6
ENSSFOT00015006047	-	5509	XM_018750947	ENSSFOP00015005950	1796 (aa)	XP_018606463	A0A1W4ZZV6

Gene Model

Click here to download ENSSFOG00015003881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003881's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003881	pdcd11	99	46.556	ENSG00000148843	PDCD11	99	46.688	Homo_sapiens
ENSSFOG00015003881	pdcd11	100	56.013	ENSAPOG00000015629	pdcd11	100	56.013	Acanthochromis_polyacanthus
ENSSFOG00015003881	pdcd11	99	46.588	ENSAMEG00000017935	PDCD11	99	46.802	Ailuropoda_melanoleuca
ENSSFOG00015003881	pdcd11	58	50.868	ENSACIG00000006458	-	98	50.868	Amphilophus_citrinellus
ENSSFOG00015003881	pdcd11	100	56.312	ENSAOCG00000015287	pdcd11	100	56.367	Amphiprion_ocellaris
ENSSFOG00015003881	pdcd11	64	54.272	ENSAPEG00000020240	pdcd11	100	54.272	Amphiprion_percula
ENSSFOG00015003881	pdcd11	99	55.879	ENSATEG00000021043	pdcd11	99	56.123	Anabas_testudineus
ENSSFOG00015003881	pdcd11	99	46.051	ENSAPLG00000010301	PDCD11	99	46.492	Anas_platyrhynchos
ENSSFOG00015003881	pdcd11	99	48.414	ENSACAG00000004796	PDCD11	99	48.523	Anolis_carolinensis
ENSSFOG00015003881	pdcd11	99	46.285	ENSANAG00000034576	PDCD11	99	46.339	Aotus_nancymaae
ENSSFOG00015003881	pdcd11	92	69.822	ENSACLG00000018236	pdcd11	99	69.822	Astatotilapia_calliptera
ENSSFOG00015003881	pdcd11	99	49.268	ENSAMXG00000005458	pdcd11	99	53.515	Astyanax_mexicanus
ENSSFOG00015003881	pdcd11	99	46.585	ENSBTAG00000009715	PDCD11	99	46.692	Bos_taurus
ENSSFOG00015003881	pdcd11	99	45.989	ENSCJAG00000018257	PDCD11	99	46.257	Callithrix_jacchus
ENSSFOG00015003881	pdcd11	99	46.411	ENSCAFG00000010411	PDCD11	99	46.465	Canis_familiaris
ENSSFOG00015003881	pdcd11	99	47.103	ENSCAFG00020010369	PDCD11	99	47.158	Canis_lupus_dingo
ENSSFOG00015003881	pdcd11	99	46.543	ENSCHIG00000025218	PDCD11	99	46.720	Capra_hircus
ENSSFOG00015003881	pdcd11	97	45.154	ENSTSYG00000033423	PDCD11	99	45.319	Carlito_syrichta
ENSSFOG00015003881	pdcd11	91	41.525	ENSCAPG00000005386	PDCD11	99	41.748	Cavia_aperea
ENSSFOG00015003881	pdcd11	99	45.056	ENSCPOG00000010957	PDCD11	99	45.177	Cavia_porcellus
ENSSFOG00015003881	pdcd11	99	46.289	ENSCCAG00000018950	PDCD11	99	46.343	Cebus_capucinus
ENSSFOG00015003881	pdcd11	99	46.318	ENSCATG00000044331	PDCD11	99	46.478	Cercocebus_atys
ENSSFOG00015003881	pdcd11	99	45.820	ENSCLAG00000001029	PDCD11	99	45.927	Chinchilla_lanigera
ENSSFOG00015003881	pdcd11	99	46.368	ENSCSAG00000005346	PDCD11	99	46.528	Chlorocebus_sabaeus
ENSSFOG00015003881	pdcd11	71	71.318	ENSCHOG00000004796	PDCD11	76	71.318	Choloepus_hoffmanni
ENSSFOG00015003881	pdcd11	92	65.517	ENSCPBG00000024487	PDCD11	99	65.527	Chrysemys_picta_bellii
ENSSFOG00015003881	pdcd11	88	34.615	ENSCING00000002715	-	91	32.616	Ciona_intestinalis
ENSSFOG00015003881	pdcd11	99	46.368	ENSCANG00000043300	PDCD11	99	46.581	Colobus_angolensis_palliatus
ENSSFOG00015003881	pdcd11	99	45.576	ENSCGRG00001006458	Pdcd11	99	46.002	Cricetulus_griseus_chok1gshd
ENSSFOG00015003881	pdcd11	99	45.392	ENSCGRG00000003583	Pdcd11	99	45.818	Cricetulus_griseus_crigri
ENSSFOG00015003881	pdcd11	97	54.216	ENSCSEG00000010739	pdcd11	99	54.520	Cynoglossus_semilaevis
ENSSFOG00015003881	pdcd11	95	60.813	ENSCVAG00000018903	pdcd11	99	60.650	Cyprinodon_variegatus
ENSSFOG00015003881	pdcd11	100	53.200	ENSDARG00000052480	pdcd11	100	53.200	Danio_rerio
ENSSFOG00015003881	pdcd11	99	46.064	ENSDNOG00000013838	PDCD11	99	46.011	Dasypus_novemcinctus
ENSSFOG00015003881	pdcd11	99	45.719	ENSDORG00000010420	Pdcd11	99	46.369	Dipodomys_ordii
ENSSFOG00015003881	pdcd11	63	32.782	FBgn0039182	CG5728	82	32.782	Drosophila_melanogaster
ENSSFOG00015003881	pdcd11	93	41.064	ENSETEG00000000813	PDCD11	99	40.973	Echinops_telfairi
ENSSFOG00015003881	pdcd11	84	49.677	ENSEBUG00000002358	-	96	49.677	Eptatretus_burgeri
ENSSFOG00015003881	pdcd11	95	47.430	ENSEASG00005015159	PDCD11	99	47.651	Equus_asinus_asinus
ENSSFOG00015003881	pdcd11	99	47.231	ENSECAG00000020507	PDCD11	99	47.335	Equus_caballus
ENSSFOG00015003881	pdcd11	89	46.476	ENSEEUG00000009245	PDCD11	91	46.540	Erinaceus_europaeus
ENSSFOG00015003881	pdcd11	100	55.855	ENSELUG00000004211	pdcd11	99	55.952	Esox_lucius
ENSSFOG00015003881	pdcd11	99	46.535	ENSFCAG00000002384	PDCD11	99	46.560	Felis_catus
ENSSFOG00015003881	pdcd11	99	48.096	ENSFALG00000008775	PDCD11	99	48.148	Ficedula_albicollis
ENSSFOG00015003881	pdcd11	99	44.989	ENSFDAG00000009532	PDCD11	99	45.096	Fukomys_damarensis
ENSSFOG00015003881	pdcd11	92	74.671	ENSFHEG00000022997	pdcd11	97	74.671	Fundulus_heteroclitus
ENSSFOG00015003881	pdcd11	93	53.297	ENSGMOG00000004186	pdcd11	94	53.319	Gadus_morhua
ENSSFOG00015003881	pdcd11	77	45.081	ENSGALG00000008265	PDCD11	99	44.792	Gallus_gallus
ENSSFOG00015003881	pdcd11	95	59.783	ENSGAFG00000012806	pdcd11	100	59.964	Gambusia_affinis
ENSSFOG00015003881	pdcd11	100	54.462	ENSGACG00000018233	pdcd11	97	68.930	Gasterosteus_aculeatus
ENSSFOG00015003881	pdcd11	95	49.489	ENSGAGG00000024314	PDCD11	99	49.915	Gopherus_agassizii
ENSSFOG00015003881	pdcd11	99	46.556	ENSGGOG00000011621	PDCD11	99	46.688	Gorilla_gorilla
ENSSFOG00015003881	pdcd11	99	56.060	ENSHBUG00000020226	pdcd11	99	56.298	Haplochromis_burtoni
ENSSFOG00015003881	pdcd11	99	44.920	ENSHGLG00000001462	PDCD11	99	44.920	Heterocephalus_glaber_female
ENSSFOG00015003881	pdcd11	99	44.332	ENSHGLG00100018779	PDCD11	99	44.385	Heterocephalus_glaber_male
ENSSFOG00015003881	pdcd11	100	53.103	ENSHCOG00000016006	pdcd11	100	53.374	Hippocampus_comes
ENSSFOG00015003881	pdcd11	63	52.109	ENSIPUG00000015102	pdcd11	99	53.348	Ictalurus_punctatus
ENSSFOG00015003881	pdcd11	99	46.187	ENSSTOG00000014553	PDCD11	99	46.563	Ictidomys_tridecemlineatus
ENSSFOG00015003881	pdcd11	99	46.373	ENSJJAG00000015523	Pdcd11	99	46.771	Jaculus_jaculus
ENSSFOG00015003881	pdcd11	51	52.432	ENSKMAG00000021182	pdcd11	99	52.432	Kryptolebias_marmoratus
ENSSFOG00015003881	pdcd11	100	58.091	ENSLOCG00000011818	pdcd11	100	58.091	Lepisosteus_oculatus
ENSSFOG00015003881	pdcd11	99	46.870	ENSLAFG00000008398	PDCD11	99	46.870	Loxodonta_africana
ENSSFOG00015003881	pdcd11	99	46.368	ENSMFAG00000044058	PDCD11	99	46.635	Macaca_fascicularis
ENSSFOG00015003881	pdcd11	99	46.314	ENSMMUG00000007058	PDCD11	99	46.581	Macaca_mulatta
ENSSFOG00015003881	pdcd11	99	46.314	ENSMNEG00000040726	PDCD11	99	46.528	Macaca_nemestrina
ENSSFOG00015003881	pdcd11	99	46.717	ENSMLEG00000040978	PDCD11	99	46.786	Mandrillus_leucophaeus
ENSSFOG00015003881	pdcd11	100	55.000	ENSMAMG00000009572	pdcd11	100	55.409	Mastacembelus_armatus
ENSSFOG00015003881	pdcd11	99	56.060	ENSMZEG00005008949	pdcd11	99	56.298	Maylandia_zebra
ENSSFOG00015003881	pdcd11	99	46.809	ENSMGAG00000010482	PDCD11	99	47.172	Meleagris_gallopavo
ENSSFOG00015003881	pdcd11	94	49.523	ENSMAUG00000014924	Pdcd11	96	50.616	Mesocricetus_auratus
ENSSFOG00015003881	pdcd11	99	47.075	ENSMICG00000012421	PDCD11	99	47.128	Microcebus_murinus
ENSSFOG00015003881	pdcd11	99	45.343	ENSMOCG00000021792	Pdcd11	99	45.445	Microtus_ochrogaster
ENSSFOG00015003881	pdcd11	99	49.265	ENSMMOG00000007572	pdcd11	97	53.348	Mola_mola
ENSSFOG00015003881	pdcd11	100	44.027	ENSMODG00000011077	PDCD11	100	44.298	Monodelphis_domestica
ENSSFOG00015003881	pdcd11	100	47.719	ENSMALG00000003859	pdcd11	98	52.986	Monopterus_albus
ENSSFOG00015003881	pdcd11	99	45.845	MGP_CAROLIEiJ_G0023050	Pdcd11	99	46.233	Mus_caroli
ENSSFOG00015003881	pdcd11	99	45.931	ENSMUSG00000025047	Pdcd11	99	46.059	Mus_musculus
ENSSFOG00015003881	pdcd11	99	45.672	MGP_PahariEiJ_G0014540	Pdcd11	99	45.945	Mus_pahari
ENSSFOG00015003881	pdcd11	99	46.191	MGP_SPRETEiJ_G0023971	Pdcd11	99	46.273	Mus_spretus
ENSSFOG00015003881	pdcd11	99	46.770	ENSMPUG00000016829	PDCD11	99	46.930	Mustela_putorius_furo
ENSSFOG00015003881	pdcd11	99	46.652	ENSMLUG00000004997	PDCD11	99	46.915	Myotis_lucifugus
ENSSFOG00015003881	pdcd11	99	46.158	ENSNGAG00000018143	Pdcd11	99	46.240	Nannospalax_galili
ENSSFOG00015003881	pdcd11	91	67.097	ENSNBRG00000021596	pdcd11	97	61.389	Neolamprologus_brichardi
ENSSFOG00015003881	pdcd11	99	45.430	ENSNLEG00000026700	PDCD11	99	45.561	Nomascus_leucogenys
ENSSFOG00015003881	pdcd11	70	69.333	ENSMEUG00000013719	-	70	69.333	Notamacropus_eugenii
ENSSFOG00015003881	pdcd11	99	45.265	ENSOPRG00000010593	PDCD11	99	45.503	Ochotona_princeps
ENSSFOG00015003881	pdcd11	99	44.745	ENSODEG00000008079	PDCD11	99	44.798	Octodon_degus
ENSSFOG00015003881	pdcd11	99	55.838	ENSONIG00000018835	pdcd11	99	56.115	Oreochromis_niloticus
ENSSFOG00015003881	pdcd11	99	46.533	ENSOANG00000001636	-	99	46.533	Ornithorhynchus_anatinus
ENSSFOG00015003881	pdcd11	99	45.580	ENSOCUG00000006312	PDCD11	99	45.421	Oryctolagus_cuniculus
ENSSFOG00015003881	pdcd11	100	55.507	ENSORLG00020003642	pdcd11	100	55.586	Oryzias_latipes_hni
ENSSFOG00015003881	pdcd11	100	55.647	ENSORLG00015001618	pdcd11	100	55.884	Oryzias_latipes_hsok
ENSSFOG00015003881	pdcd11	65	56.149	ENSOMEG00000010904	pdcd11	98	56.658	Oryzias_melastigma
ENSSFOG00015003881	pdcd11	99	46.022	ENSOGAG00000008683	PDCD11	99	46.183	Otolemur_garnettii
ENSSFOG00015003881	pdcd11	99	46.223	ENSOARG00000003719	PDCD11	99	46.400	Ovis_aries
ENSSFOG00015003881	pdcd11	99	46.076	ENSPPAG00000024593	PDCD11	99	45.847	Pan_paniscus
ENSSFOG00015003881	pdcd11	99	46.695	ENSPPRG00000015133	PDCD11	99	46.773	Panthera_pardus
ENSSFOG00015003881	pdcd11	99	46.748	ENSPTIG00000011433	PDCD11	99	46.773	Panthera_tigris_altaica
ENSSFOG00015003881	pdcd11	99	46.503	ENSPTRG00000002911	PDCD11	99	46.273	Pan_troglodytes
ENSSFOG00015003881	pdcd11	99	46.474	ENSPANG00000020959	PDCD11	99	46.635	Papio_anubis
ENSSFOG00015003881	pdcd11	99	62.382	ENSPKIG00000000973	pdcd11	99	62.383	Paramormyrops_kingsleyae
ENSSFOG00015003881	pdcd11	78	46.981	ENSPSIG00000005102	PDCD11	95	46.981	Pelodiscus_sinensis
ENSSFOG00015003881	pdcd11	79	60.000	ENSPMGG00000007289	pdcd11	99	60.000	Periophthalmus_magnuspinnatus
ENSSFOG00015003881	pdcd11	99	45.623	ENSPEMG00000010315	Pdcd11	99	45.860	Peromyscus_maniculatus_bairdii
ENSSFOG00015003881	pdcd11	99	41.671	ENSPMAG00000003098	pdcd11	99	42.147	Petromyzon_marinus
ENSSFOG00015003881	pdcd11	99	45.165	ENSPCIG00000001118	PDCD11	99	45.218	Phascolarctos_cinereus
ENSSFOG00015003881	pdcd11	100	55.171	ENSPFOG00000006012	pdcd11	100	55.391	Poecilia_formosa
ENSSFOG00015003881	pdcd11	96	59.443	ENSPLAG00000014494	pdcd11	100	59.443	Poecilia_latipinna
ENSSFOG00015003881	pdcd11	90	64.363	ENSPMEG00000018177	pdcd11	98	64.795	Poecilia_mexicana
ENSSFOG00015003881	pdcd11	100	54.226	ENSPREG00000000475	pdcd11	100	54.526	Poecilia_reticulata
ENSSFOG00015003881	pdcd11	99	41.251	ENSPPYG00000002621	PDCD11	99	41.480	Pongo_abelii
ENSSFOG00015003881	pdcd11	63	57.407	ENSPCAG00000011663	PDCD11	65	57.407	Procavia_capensis
ENSSFOG00015003881	pdcd11	99	41.692	ENSPCOG00000023327	PDCD11	99	41.692	Propithecus_coquereli
ENSSFOG00015003881	pdcd11	99	46.531	ENSPVAG00000004176	PDCD11	99	46.531	Pteropus_vampyrus
ENSSFOG00015003881	pdcd11	99	56.115	ENSPNYG00000003979	pdcd11	99	56.354	Pundamilia_nyererei
ENSSFOG00015003881	pdcd11	95	55.409	ENSPNAG00000017225	pdcd11	100	55.695	Pygocentrus_nattereri
ENSSFOG00015003881	pdcd11	99	45.663	ENSRNOG00000020304	Pdcd11	99	45.667	Rattus_norvegicus
ENSSFOG00015003881	pdcd11	99	46.368	ENSRBIG00000011889	PDCD11	99	46.581	Rhinopithecus_bieti
ENSSFOG00015003881	pdcd11	99	46.421	ENSRROG00000030483	PDCD11	99	46.635	Rhinopithecus_roxellana
ENSSFOG00015003881	pdcd11	94	33.170	YMR229C	-	98	33.660	Saccharomyces_cerevisiae
ENSSFOG00015003881	pdcd11	99	45.283	ENSSBOG00000030308	PDCD11	99	45.472	Saimiri_boliviensis_boliviensis
ENSSFOG00015003881	pdcd11	100	44.403	ENSSHAG00000018258	PDCD11	100	44.008	Sarcophilus_harrisii
ENSSFOG00015003881	pdcd11	100	55.684	ENSSMAG00000006612	pdcd11	100	55.982	Scophthalmus_maximus
ENSSFOG00015003881	pdcd11	94	59.638	ENSSDUG00000021302	pdcd11	99	60.263	Seriola_dumerili
ENSSFOG00015003881	pdcd11	60	54.757	ENSSLDG00000010228	pdcd11	98	55.470	Seriola_lalandi_dorsalis
ENSSFOG00015003881	pdcd11	80	67.308	ENSSARG00000002540	PDCD11	67	67.308	Sorex_araneus
ENSSFOG00015003881	pdcd11	97	54.072	ENSSPAG00000017558	pdcd11	100	54.473	Stegastes_partitus
ENSSFOG00015003881	pdcd11	99	46.723	ENSSSCG00000010599	PDCD11	99	47.092	Sus_scrofa
ENSSFOG00015003881	pdcd11	71	51.525	ENSTRUG00000014291	pdcd11	100	51.797	Takifugu_rubripes
ENSSFOG00015003881	pdcd11	99	53.825	ENSTNIG00000012085	pdcd11	99	53.967	Tetraodon_nigroviridis
ENSSFOG00015003881	pdcd11	96	64.620	ENSTBEG00000001893	PDCD11	99	44.824	Tupaia_belangeri
ENSSFOG00015003881	pdcd11	99	44.066	ENSTTRG00000003356	PDCD11	99	44.646	Tursiops_truncatus
ENSSFOG00015003881	pdcd11	99	46.531	ENSUAMG00000018015	PDCD11	99	46.692	Ursus_americanus
ENSSFOG00015003881	pdcd11	99	46.039	ENSUMAG00000023567	PDCD11	99	46.064	Ursus_maritimus
ENSSFOG00015003881	pdcd11	63	51.648	ENSVPAG00000007405	PDCD11	78	51.648	Vicugna_pacos
ENSSFOG00015003881	pdcd11	99	46.638	ENSVVUG00000004457	PDCD11	99	46.716	Vulpes_vulpes
ENSSFOG00015003881	pdcd11	100	47.106	ENSXETG00000009482	pdcd11	100	47.346	Xenopus_tropicalis
ENSSFOG00015003881	pdcd11	100	47.259	ENSXCOG00000012420	pdcd11	100	47.256	Xiphophorus_couchianus
ENSSFOG00015003881	pdcd11	100	54.706	ENSXMAG00000004638	pdcd11	100	55.006	Xiphophorus_maculatus