EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015003884 (Gene tree)
Gene ID
108923555
Gene Symbol
-
Alias
-
Full Name
splicing factor U2AF 65 kDa subunit-like
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
23450 bases
Position
chrKV410826.1:632071-655520
Accession
108923555
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015006028RRM_1PF00076.221.2e-3312
ENSSFOP00015006028RRM_1PF00076.221.2e-3322
ENSSFOP00015006001RRM_1PF00076.222.2e-3312
ENSSFOP00015006001RRM_1PF00076.222.2e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015006125-1248-ENSSFOP00015006028415 (aa)--
ENSSFOT00015006098-3130XM_018734388ENSSFOP00015006001466 (aa)XP_018589904A0A1W4YE75
Gene Model
Click here to download ENSSFOG00015003884's gene model file
Pathways
Pathway IDPathway NameSource
sfm03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003884's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015003884-8937.255ENSSFOG00015019619puf60b6737.255
ENSSFOG00015003884-8535.294ENSSFOG00015019371puf60a6135.294
ENSSFOG00015003884-9480.153ENSSFOG00015019182u2af2b8980.153
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015003884-9481.888ENSG00000063244U2AF29982.026Homo_sapiens
ENSSFOG00015003884-10092.060ENSAPOG00000002208-10092.060Acanthochromis_polyacanthus
ENSSFOG00015003884-7376.398ENSAPOG00000023155u2af2a9976.398Acanthochromis_polyacanthus
ENSSFOG00015003884-8481.143ENSAMEG00000003864U2AF210075.121Ailuropoda_melanoleuca
ENSSFOG00015003884-9789.542ENSACIG00000014173-9989.542Amphilophus_citrinellus
ENSSFOG00015003884-9181.316ENSACIG00000005749u2af2a9976.869Amphilophus_citrinellus
ENSSFOG00015003884-9480.612ENSAOCG00000015571u2af2a10075.053Amphiprion_ocellaris
ENSSFOG00015003884-10092.060ENSAOCG00000003595-10092.060Amphiprion_ocellaris
ENSSFOG00015003884-9889.890ENSAPEG00000020062-9889.890Amphiprion_percula
ENSSFOG00015003884-9181.579ENSAPEG00000009376u2af2a9876.611Amphiprion_percula
ENSSFOG00015003884-9791.556ENSATEG00000020577-9991.556Anabas_testudineus
ENSSFOG00015003884-9480.612ENSATEG00000022332u2af2a9974.841Anabas_testudineus
ENSSFOG00015003884-9481.266ENSACAG00000015489U2AF29976.483Anolis_carolinensis
ENSSFOG00015003884-8980.000ENSANAG00000028042U2AF29974.795Aotus_nancymaae
ENSSFOG00015003884-9480.357ENSACLG00000022181u2af2a9976.744Astatotilapia_calliptera
ENSSFOG00015003884-10092.060ENSACLG00000020793-10092.060Astatotilapia_calliptera
ENSSFOG00015003884-10071.399ENSAMXG00000033347u2af2a9972.025Astyanax_mexicanus
ENSSFOG00015003884-9479.644ENSAMXG00000039454u2af2b9973.673Astyanax_mexicanus
ENSSFOG00015003884-9382.171ENSBTAG00000002830U2AF29976.546Bos_taurus
ENSSFOG00015003884-9357.436WBGene00006697uaf-110054.483Caenorhabditis_elegans
ENSSFOG00015003884-9481.061ENSCJAG00000017128U2AF29975.630Callithrix_jacchus
ENSSFOG00015003884-9481.888ENSCAFG00000002551U2AF29976.271Canis_familiaris
ENSSFOG00015003884-9481.061ENSCAFG00020015445U2AF29772.899Canis_lupus_dingo
ENSSFOG00015003884-9667.813ENSCHIG00000023595U2AF29565.977Capra_hircus
ENSSFOG00015003884-9580.348ENSTSYG00000007432U2AF29975.630Carlito_syrichta
ENSSFOG00015003884-9481.061ENSCAPG00000008466U2AF29975.599Cavia_aperea
ENSSFOG00015003884-9481.061ENSCPOG00000001582U2AF29975.630Cavia_porcellus
ENSSFOG00015003884-9481.061ENSCCAG00000023336U2AF29975.630Cebus_capucinus
ENSSFOG00015003884-9481.888ENSCATG00000004637U2AF29976.271Cercocebus_atys
ENSSFOG00015003884-9481.888ENSCLAG00000000596U2AF29976.271Chinchilla_lanigera
ENSSFOG00015003884-9481.888ENSCSAG00000001722U2AF29976.271Chlorocebus_sabaeus
ENSSFOG00015003884-9379.949ENSCPBG00000004485U2AF29982.026Chrysemys_picta_bellii
ENSSFOG00015003884-9369.251ENSCING00000003455-9265.419Ciona_intestinalis
ENSSFOG00015003884-9368.123ENSCSAVG00000006813-9962.690Ciona_savignyi
ENSSFOG00015003884-9475.190ENSCANG00000043845-9972.246Colobus_angolensis_palliatus
ENSSFOG00015003884-8482.571ENSCANG00000031002-9676.279Colobus_angolensis_palliatus
ENSSFOG00015003884-9377.378ENSCGRG00001007486-9972.246Cricetulus_griseus_chok1gshd
ENSSFOG00015003884-9382.171ENSCGRG00001003185-9976.546Cricetulus_griseus_chok1gshd
ENSSFOG00015003884-5779.916ENSCGRG00000004524-8276.680Cricetulus_griseus_crigri
ENSSFOG00015003884-9377.378ENSCGRG00000018587-9972.246Cricetulus_griseus_crigri
ENSSFOG00015003884-10085.837ENSCSEG00000020504-9486.695Cynoglossus_semilaevis
ENSSFOG00015003884-7373.718ENSCSEG00000018709u2af2a9573.718Cynoglossus_semilaevis
ENSSFOG00015003884-10091.416ENSCVAG00000023307-10091.416Cyprinodon_variegatus
ENSSFOG00015003884-9480.867ENSCVAG00000001259u2af2a9975.264Cyprinodon_variegatus
ENSSFOG00015003884-9678.803ENSDARG00000011740u2af2b9973.278Danio_rerio
ENSSFOG00015003884-9180.840ENSDARG00000012505u2af2a9973.573Danio_rerio
ENSSFOG00015003884-8482.571ENSDNOG00000047039U2AF29676.279Dasypus_novemcinctus
ENSSFOG00015003884-9481.061ENSDORG00000003250U2af29975.630Dipodomys_ordii
ENSSFOG00015003884-9372.634FBgn0005411U2af5010072.358Drosophila_melanogaster
ENSSFOG00015003884-9251.716FBgn0034834LS29649.887Drosophila_melanogaster
ENSSFOG00015003884-9163.852ENSEBUG00000001732U2AF29859.259Eptatretus_burgeri
ENSSFOG00015003884-9873.479ENSEBUG00000010917U2AF210068.790Eptatretus_burgeri
ENSSFOG00015003884-9580.100ENSEASG00005020708U2AF29073.830Equus_asinus_asinus
ENSSFOG00015003884-9382.171ENSECAG00000010110U2AF29976.546Equus_caballus
ENSSFOG00015003884-9577.889ENSELUG00000022291u2af2b9971.789Esox_lucius
ENSSFOG00015003884-9180.362ENSELUG00000015850u2af2a9973.859Esox_lucius
ENSSFOG00015003884-10088.841ENSELUG00000018459-10088.841Esox_lucius
ENSSFOG00015003884-9481.061ENSFCAG00000011504U2AF29975.630Felis_catus
ENSSFOG00015003884-9481.061ENSFDAG00000011264U2AF29974.255Fukomys_damarensis
ENSSFOG00015003884-9678.186ENSFHEG00000016025u2af2a9974.947Fundulus_heteroclitus
ENSSFOG00015003884-9181.627ENSGMOG00000004535u2af2a9974.262Gadus_morhua
ENSSFOG00015003884-9281.510ENSGALG00000052748U2AF26576.573Gallus_gallus
ENSSFOG00015003884-9480.867ENSGAFG00000013626u2af2a8875.476Gambusia_affinis
ENSSFOG00015003884-10088.412ENSGAFG00000005628-10089.270Gambusia_affinis
ENSSFOG00015003884-9490.076ENSGACG00000014500-10084.504Gasterosteus_aculeatus
ENSSFOG00015003884-10073.718ENSGACG00000010632U2AF29975.106Gasterosteus_aculeatus
ENSSFOG00015003884-7382.026ENSGAGG00000011849U2AF29982.026Gopherus_agassizii
ENSSFOG00015003884-6172.656ENSGGOG00000036399-9672.656Gorilla_gorilla
ENSSFOG00015003884-10092.060ENSHBUG00000017424-10092.060Haplochromis_burtoni
ENSSFOG00015003884-9480.357ENSHBUG00000013935u2af2a9976.869Haplochromis_burtoni
ENSSFOG00015003884-9481.061ENSHGLG00000005889U2AF29975.630Heterocephalus_glaber_female
ENSSFOG00015003884-9481.061ENSHGLG00100004757U2AF29975.599Heterocephalus_glaber_male
ENSSFOG00015003884-9677.751ENSHCOG00000019367u2af2a9974.375Hippocampus_comes
ENSSFOG00015003884-9380.357ENSIPUG00000009077u2af29973.222Ictalurus_punctatus
ENSSFOG00015003884-10084.120ENSIPUG00000009844-10084.120Ictalurus_punctatus
ENSSFOG00015003884-9180.052ENSIPUG00000007717u2af2a9972.304Ictalurus_punctatus
ENSSFOG00015003884-9481.061ENSSTOG00000019595U2AF29975.630Ictidomys_tridecemlineatus
ENSSFOG00015003884-9481.061ENSJJAG00000017705U2af29975.630Jaculus_jaculus
ENSSFOG00015003884-9480.867ENSKMAG00000005960u2af2a9877.315Kryptolebias_marmoratus
ENSSFOG00015003884-9480.612ENSLBEG00000016162u2af2a9975.053Labrus_bergylta
ENSSFOG00015003884-9788.017ENSLBEG00000005001-9988.017Labrus_bergylta
ENSSFOG00015003884-8782.240ENSLACG00000001648U2AF29982.240Latimeria_chalumnae
ENSSFOG00015003884-6682.971ENSLOCG00000008050u2af2b9374.412Lepisosteus_oculatus
ENSSFOG00015003884-10089.914ENSLOCG00000010843-10089.914Lepisosteus_oculatus
ENSSFOG00015003884-9475.255ENSLAFG00000028496-9968.220Loxodonta_africana
ENSSFOG00015003884-9779.024ENSLAFG00000018056-9976.483Loxodonta_africana
ENSSFOG00015003884-9481.061ENSMFAG00000038383U2AF29975.630Macaca_fascicularis
ENSSFOG00015003884-9480.808ENSMMUG00000004810U2AF29975.420Macaca_mulatta
ENSSFOG00015003884-9481.888ENSMNEG00000042096U2AF29976.271Macaca_nemestrina
ENSSFOG00015003884-9481.888ENSMLEG00000032219U2AF28976.316Mandrillus_leucophaeus
ENSSFOG00015003884-10089.485ENSMAMG00000020158-10089.485Mastacembelus_armatus
ENSSFOG00015003884-9479.397ENSMAMG00000019817u2af2a9975.520Mastacembelus_armatus
ENSSFOG00015003884-10092.060ENSMZEG00005023318-10092.060Maylandia_zebra
ENSSFOG00015003884-9480.357ENSMZEG00005016563u2af2a9974.841Maylandia_zebra
ENSSFOG00015003884-9481.061ENSMAUG00000008180U2af29975.107Mesocricetus_auratus
ENSSFOG00015003884-9481.888ENSMICG00000027681U2AF29976.271Microcebus_murinus
ENSSFOG00015003884-9481.061ENSMOCG00000013214-9975.630Microtus_ochrogaster
ENSSFOG00015003884-9475.765ENSMOCG00000007227-9969.280Microtus_ochrogaster
ENSSFOG00015003884-7379.085ENSMOCG00000001018-9979.085Microtus_ochrogaster
ENSSFOG00015003884-9284.673ENSMMOG00000000531-10076.141Mola_mola
ENSSFOG00015003884-9181.842ENSMMOG00000016600u2af2a9977.083Mola_mola
ENSSFOG00015003884-9480.867ENSMALG00000009985u2af2a9975.264Monopterus_albus
ENSSFOG00015003884-9481.888MGP_CAROLIEiJ_G0029150U2af29976.271Mus_caroli
ENSSFOG00015003884-9481.888ENSMUSG00000030435U2af29982.026Mus_musculus
ENSSFOG00015003884-9481.888MGP_PahariEiJ_G0021017U2af29976.271Mus_pahari
ENSSFOG00015003884-9481.888MGP_SPRETEiJ_G0030203U2af29976.271Mus_spretus
ENSSFOG00015003884-9481.888ENSMPUG00000007135U2AF29976.271Mustela_putorius_furo
ENSSFOG00015003884-5677.083ENSMLUG00000011051-9977.083Myotis_lucifugus
ENSSFOG00015003884-9779.024ENSNGAG00000020369U2af29975.630Nannospalax_galili
ENSSFOG00015003884-9789.978ENSNBRG00000011100-9989.978Neolamprologus_brichardi
ENSSFOG00015003884-9480.357ENSNBRG00000002568u2af2a9976.869Neolamprologus_brichardi
ENSSFOG00015003884-9472.362ENSNLEG00000010562U2AF29982.026Nomascus_leucogenys
ENSSFOG00015003884-9369.821ENSMEUG00000002346U2AF29965.495Notamacropus_eugenii
ENSSFOG00015003884-9475.000ENSODEG00000012729-9970.588Octodon_degus
ENSSFOG00015003884-9855.628ENSODEG00000009254-9957.143Octodon_degus
ENSSFOG00015003884-9480.357ENSONIG00000012793u2af2a9974.160Oreochromis_niloticus
ENSSFOG00015003884-10092.060ENSONIG00000009682-10092.060Oreochromis_niloticus
ENSSFOG00015003884-9579.950ENSORLG00000011545u2af2a9975.476Oryzias_latipes
ENSSFOG00015003884-9579.950ENSORLG00020006941u2af2a9975.476Oryzias_latipes_hni
ENSSFOG00015003884-9579.950ENSORLG00015012843u2af2a9975.476Oryzias_latipes_hsok
ENSSFOG00015003884-9579.950ENSOMEG00000011386u2af2a9977.083Oryzias_melastigma
ENSSFOG00015003884-9481.061ENSOGAG00000007206-9975.630Otolemur_garnettii
ENSSFOG00015003884-9549.669ENSOGAG00000034729-9649.669Otolemur_garnettii
ENSSFOG00015003884-9475.126ENSOARG00000001091U2AF29968.619Ovis_aries
ENSSFOG00015003884-9481.061ENSPPAG00000039782U2AF29975.630Pan_paniscus
ENSSFOG00015003884-9481.061ENSPPRG00000013843U2AF29975.630Panthera_pardus
ENSSFOG00015003884-9475.819ENSPTIG00000005489U2AF29966.807Panthera_tigris_altaica
ENSSFOG00015003884-9481.061ENSPTRG00000011523U2AF29982.026Pan_troglodytes
ENSSFOG00015003884-9481.888ENSPANG00000008459U2AF29976.271Papio_anubis
ENSSFOG00015003884-10096.567ENSPKIG00000014878-10096.567Paramormyrops_kingsleyae
ENSSFOG00015003884-9479.898ENSPKIG00000024346u2af2b9976.322Paramormyrops_kingsleyae
ENSSFOG00015003884-9460.934ENSPSIG00000008014U2AF29956.315Pelodiscus_sinensis
ENSSFOG00015003884-9175.000ENSPMGG00000022980u2af2a9871.364Periophthalmus_magnuspinnatus
ENSSFOG00015003884-9481.061ENSPEMG00000007378U2af29982.026Peromyscus_maniculatus_bairdii
ENSSFOG00015003884-9177.604ENSPMAG00000004097u2af2a10072.786Petromyzon_marinus
ENSSFOG00015003884-9481.061ENSPCIG00000018013U2AF29975.630Phascolarctos_cinereus
ENSSFOG00015003884-10088.841ENSPFOG00000006433-10089.700Poecilia_formosa
ENSSFOG00015003884-9480.867ENSPFOG00000010799u2af2a10075.264Poecilia_formosa
ENSSFOG00015003884-9492.564ENSPLAG00000003275-9889.333Poecilia_latipinna
ENSSFOG00015003884-9480.867ENSPLAG00000014365u2af2a9975.264Poecilia_latipinna
ENSSFOG00015003884-9492.051ENSPMEG00000003734-9888.889Poecilia_mexicana
ENSSFOG00015003884-9480.867ENSPMEG00000002969u2af2a9975.264Poecilia_mexicana
ENSSFOG00015003884-9480.867ENSPREG00000008739u2af2a9877.315Poecilia_reticulata
ENSSFOG00015003884-10090.129ENSPREG00000013036-10092.466Poecilia_reticulata
ENSSFOG00015003884-6481.387ENSPPYG00000010429-9481.387Pongo_abelii
ENSSFOG00015003884-10058.947ENSPCAG00000014399-9961.845Procavia_capensis
ENSSFOG00015003884-9472.194ENSPCAG00000003709-9970.545Procavia_capensis
ENSSFOG00015003884-9481.061ENSPCOG00000025870U2AF29975.630Propithecus_coquereli
ENSSFOG00015003884-9480.808ENSPVAG00000004540U2AF29975.420Pteropus_vampyrus
ENSSFOG00015003884-10092.060ENSPNYG00000011605-10092.060Pundamilia_nyererei
ENSSFOG00015003884-9480.357ENSPNYG00000001438u2af2a9976.869Pundamilia_nyererei
ENSSFOG00015003884-9181.365ENSPNAG00000017620u2af2a9973.729Pygocentrus_nattereri
ENSSFOG00015003884-9480.407ENSPNAG00000027289u2af2b9974.310Pygocentrus_nattereri
ENSSFOG00015003884-10091.202ENSPNAG00000007182-10091.202Pygocentrus_nattereri
ENSSFOG00015003884-9481.888ENSRNOG00000015914U2af29976.271Rattus_norvegicus
ENSSFOG00015003884-9480.808ENSRBIG00000041018U2AF29975.420Rhinopithecus_bieti
ENSSFOG00015003884-9476.786ENSRROG00000031238-9972.034Rhinopithecus_roxellana
ENSSFOG00015003884-8381.870ENSRROG00000031103-10075.721Rhinopithecus_roxellana
ENSSFOG00015003884-9481.888ENSSBOG00000023891U2AF29976.271Saimiri_boliviensis_boliviensis
ENSSFOG00015003884-5870.139ENSSHAG00000001167U2AF28558.961Sarcophilus_harrisii
ENSSFOG00015003884-10073.319ENSSMAG00000012582u2af2a9974.576Scophthalmus_maximus
ENSSFOG00015003884-10090.129ENSSMAG00000013779-10090.129Scophthalmus_maximus
ENSSFOG00015003884-9789.371ENSSDUG00000021434-9489.371Seriola_dumerili
ENSSFOG00015003884-9480.357ENSSDUG00000009457u2af2a10074.841Seriola_dumerili
ENSSFOG00015003884-9789.371ENSSLDG00000016151-9989.371Seriola_lalandi_dorsalis
ENSSFOG00015003884-9480.357ENSSLDG00000022742u2af2a9974.841Seriola_lalandi_dorsalis
ENSSFOG00015003884-9480.000ENSSPUG00000010229U2AF29975.262Sphenodon_punctatus
ENSSFOG00015003884-9480.612ENSSPAG00000022519u2af2a9975.053Stegastes_partitus
ENSSFOG00015003884-10092.275ENSSPAG00000005241-10092.275Stegastes_partitus
ENSSFOG00015003884-9481.888ENSSSCG00000034815U2AF29976.546Sus_scrofa
ENSSFOG00015003884-9180.475ENSTRUG00000005514u2af2a9873.789Takifugu_rubripes
ENSSFOG00015003884-10085.439ENSTNIG00000011257-10085.653Tetraodon_nigroviridis
ENSSFOG00015003884-9481.122ENSTNIG00000008106U2AF29975.319Tetraodon_nigroviridis
ENSSFOG00015003884-8378.348ENSTBEG00000009104U2AF29976.584Tupaia_belangeri
ENSSFOG00015003884-9481.061ENSTTRG00000000987U2AF29975.630Tursiops_truncatus
ENSSFOG00015003884-9481.061ENSUAMG00000019883U2AF29973.291Ursus_americanus
ENSSFOG00015003884-9481.061ENSUMAG00000024586U2AF29982.026Ursus_maritimus
ENSSFOG00015003884-9481.888ENSVVUG00000006956U2AF26676.600Vulpes_vulpes
ENSSFOG00015003884-10073.166ENSXETG00000019128u2af29974.895Xenopus_tropicalis
ENSSFOG00015003884-9181.842ENSXCOG00000019406u2af2a9877.315Xiphophorus_couchianus
ENSSFOG00015003884-10089.914ENSXMAG00000000768-9689.914Xiphophorus_maculatus
ENSSFOG00015003884-9480.867ENSXMAG00000011979u2af2a9975.264Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us