EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015003920 (Gene tree)
Gene ID: 108934227
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC108934227
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 6871 bases
Position: chrKV411071.1:9304828-9311698
Accession: 108934227
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006020	Sua5_yciO_yrdC	PF01300.18	2.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015006117	-	3187	XM_018751791	ENSSFOP00015006020	883 (aa)	XP_018607307	A0A1W4ZUH0

Gene Model

Click here to download ENSSFOG00015003920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003920's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015003920	-	50	33.827	ENSSFOG00015009030	-	82	32.550
ENSSFOG00015003920	-	99	75.827	ENSSFOG00015010891	si:ch211-153b23.4	99	75.827

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003920	-	91	67.946	ENSAPOG00000006144	si:ch211-153b23.4	91	68.774	Acanthochromis_polyacanthus
ENSSFOG00015003920	-	96	65.765	ENSAPOG00000006178	si:ch211-153b23.4	95	65.647	Acanthochromis_polyacanthus
ENSSFOG00015003920	-	96	67.773	ENSACIG00000006997	si:ch211-153b23.4	98	67.773	Amphilophus_citrinellus
ENSSFOG00015003920	-	53	32.787	ENSAOCG00000010974	si:ch211-153b23.3	53	32.787	Amphiprion_ocellaris
ENSSFOG00015003920	-	94	65.108	ENSAOCG00000010999	si:ch211-153b23.4	100	65.108	Amphiprion_ocellaris
ENSSFOG00015003920	-	53	32.158	ENSAPEG00000014700	si:ch211-153b23.3	53	32.158	Amphiprion_percula
ENSSFOG00015003920	-	95	66.229	ENSAPEG00000014665	si:ch211-153b23.4	97	66.229	Amphiprion_percula
ENSSFOG00015003920	-	99	67.841	ENSATEG00000004948	si:ch211-153b23.4	99	67.841	Anabas_testudineus
ENSSFOG00015003920	-	94	60.744	ENSAPLG00000013596	-	99	60.890	Anas_platyrhynchos
ENSSFOG00015003920	-	99	65.600	ENSACLG00000005471	si:ch211-153b23.4	98	65.600	Astatotilapia_calliptera
ENSSFOG00015003920	-	96	68.852	ENSAMXG00000013879	si:ch211-153b23.4	99	68.852	Astyanax_mexicanus
ENSSFOG00015003920	-	53	34.029	ENSAMXG00000038564	si:ch211-153b23.3	54	34.029	Astyanax_mexicanus
ENSSFOG00015003920	-	95	67.703	ENSCSEG00000014838	si:ch211-153b23.4	98	67.703	Cynoglossus_semilaevis
ENSSFOG00015003920	-	93	68.088	ENSCVAG00000021145	si:ch211-153b23.4	100	68.088	Cyprinodon_variegatus
ENSSFOG00015003920	-	50	34.444	ENSDARG00000104919	si:ch211-153b23.3	50	34.444	Danio_rerio
ENSSFOG00015003920	-	99	65.753	ENSDARG00000077169	si:ch211-153b23.4	98	65.753	Danio_rerio
ENSSFOG00015003920	-	99	65.831	ENSELUG00000004961	si:ch211-153b23.4	97	65.831	Esox_lucius
ENSSFOG00015003920	-	94	57.229	ENSFALG00000011343	-	94	57.229	Ficedula_albicollis
ENSSFOG00015003920	-	53	32.992	ENSFHEG00000010030	si:ch211-153b23.3	53	32.992	Fundulus_heteroclitus
ENSSFOG00015003920	-	82	76.190	ENSFHEG00000009888	si:ch211-153b23.4	79	76.190	Fundulus_heteroclitus
ENSSFOG00015003920	-	92	67.488	ENSFHEG00000010001	si:ch211-153b23.4	99	67.488	Fundulus_heteroclitus
ENSSFOG00015003920	-	89	66.837	ENSGAFG00000007442	si:ch211-153b23.4	92	66.837	Gambusia_affinis
ENSSFOG00015003920	-	97	67.366	ENSGACG00000018253	si:ch211-153b23.4	99	67.366	Gasterosteus_aculeatus
ENSSFOG00015003920	-	84	62.046	ENSGAGG00000024601	-	97	62.097	Gopherus_agassizii
ENSSFOG00015003920	-	78	68.029	ENSHBUG00000000013	si:ch211-153b23.4	89	68.029	Haplochromis_burtoni
ENSSFOG00015003920	-	96	67.685	ENSIPUG00000015205	si:ch211-153b23.4	99	67.685	Ictalurus_punctatus
ENSSFOG00015003920	-	59	31.698	ENSIPUG00000015213	si:ch211-153b23.3	58	31.638	Ictalurus_punctatus
ENSSFOG00015003920	-	99	65.873	ENSKMAG00000006919	-	98	65.873	Kryptolebias_marmoratus
ENSSFOG00015003920	-	93	68.287	ENSKMAG00000006829	si:ch211-153b23.4	99	68.287	Kryptolebias_marmoratus
ENSSFOG00015003920	-	99	67.617	ENSLBEG00000026309	si:ch211-153b23.4	99	67.617	Labrus_bergylta
ENSSFOG00015003920	-	95	65.238	ENSLACG00000017592	si:ch211-153b23.4	99	65.357	Latimeria_chalumnae
ENSSFOG00015003920	-	93	70.060	ENSMAMG00000009277	si:ch211-153b23.4	99	70.060	Mastacembelus_armatus
ENSSFOG00015003920	-	95	69.892	ENSMAMG00000009358	si:ch211-153b23.4	100	69.892	Mastacembelus_armatus
ENSSFOG00015003920	-	93	67.152	ENSMZEG00005011433	si:ch211-153b23.4	99	67.152	Maylandia_zebra
ENSSFOG00015003920	-	94	61.325	ENSMGAG00000005478	-	99	61.325	Meleagris_gallopavo
ENSSFOG00015003920	-	93	68.697	ENSMMOG00000004425	si:ch211-153b23.4	100	68.697	Mola_mola
ENSSFOG00015003920	-	92	67.491	ENSNBRG00000013392	si:ch211-153b23.4	100	67.491	Neolamprologus_brichardi
ENSSFOG00015003920	-	99	65.604	ENSONIG00000017875	si:ch211-153b23.4	99	65.604	Oreochromis_niloticus
ENSSFOG00015003920	-	99	64.726	ENSORLG00000006169	si:ch211-153b23.4	98	64.726	Oryzias_latipes
ENSSFOG00015003920	-	99	64.612	ENSORLG00020009905	si:ch211-153b23.4	98	64.612	Oryzias_latipes_hni
ENSSFOG00015003920	-	98	65.273	ENSORLG00015003709	si:ch211-153b23.4	96	65.273	Oryzias_latipes_hsok
ENSSFOG00015003920	-	97	66.550	ENSOMEG00000007682	si:ch211-153b23.4	98	65.108	Oryzias_melastigma
ENSSFOG00015003920	-	100	78.482	ENSPKIG00000014429	si:ch211-153b23.4	100	78.482	Paramormyrops_kingsleyae
ENSSFOG00015003920	-	50	32.450	ENSPKIG00000022450	si:ch211-153b23.3	53	32.450	Paramormyrops_kingsleyae
ENSSFOG00015003920	-	99	70.762	ENSPKIG00000025681	si:ch211-153b23.4	100	70.762	Paramormyrops_kingsleyae
ENSSFOG00015003920	-	94	56.971	ENSPMGG00000001313	si:ch211-153b23.4	90	57.023	Periophthalmus_magnuspinnatus
ENSSFOG00015003920	-	78	70.130	ENSPFOG00000012164	si:ch211-153b23.4	96	70.130	Poecilia_formosa
ENSSFOG00015003920	-	93	67.564	ENSPLAG00000016295	si:ch211-153b23.4	100	67.564	Poecilia_latipinna
ENSSFOG00015003920	-	87	67.708	ENSPMEG00000007538	si:ch211-153b23.4	94	67.726	Poecilia_mexicana
ENSSFOG00015003920	-	93	66.909	ENSPNYG00000000250	si:ch211-153b23.4	99	66.909	Pundamilia_nyererei
ENSSFOG00015003920	-	97	70.760	ENSPNAG00000019554	si:ch211-153b23.4	95	70.760	Pygocentrus_nattereri
ENSSFOG00015003920	-	99	67.617	ENSSMAG00000010067	si:ch211-153b23.4	99	67.617	Scophthalmus_maximus
ENSSFOG00015003920	-	93	68.940	ENSSDUG00000006671	si:ch211-153b23.4	100	68.940	Seriola_dumerili
ENSSFOG00015003920	-	96	47.271	ENSSDUG00000006842	si:ch211-153b23.4	99	47.271	Seriola_dumerili
ENSSFOG00015003920	-	77	66.520	ENSSDUG00000006931	si:ch211-153b23.4	92	66.520	Seriola_dumerili
ENSSFOG00015003920	-	94	59.952	ENSTGUG00000005499	-	99	59.760	Taeniopygia_guttata
ENSSFOG00015003920	-	93	68.171	ENSTRUG00000003247	si:ch211-153b23.4	99	68.171	Takifugu_rubripes
ENSSFOG00015003920	-	95	67.225	ENSTNIG00000008958	si:ch211-153b23.4	99	67.225	Tetraodon_nigroviridis
ENSSFOG00015003920	-	97	56.152	ENSXETG00000004489	-	96	56.152	Xenopus_tropicalis
ENSSFOG00015003920	-	93	67.844	ENSXMAG00000021388	si:ch211-153b23.4	99	67.616	Xiphophorus_maculatus
ENSSFOG00015003920	-	96	65.497	ENSXMAG00000009416	-	99	65.497	Xiphophorus_maculatus
ENSSFOG00015003920	-	58	31.481	ENSXMAG00000029318	si:ch211-153b23.3	59	31.481	Xiphophorus_maculatus