EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015003932 (Gene tree)
Gene ID: 108926876
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing protein 1 homolog A-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 8518 bases
Position: chrKV410861.1:1827805-1836322
Accession: 108926876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006032	Nop52	PF05997.12	8.1e-57	1	1
ENSSFOP00015006043	Nop52	PF05997.12	1.1e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015006140	-	3448	XM_018739844	ENSSFOP00015006043	784 (aa)	XP_018595360	-
ENSSFOT00015006129	-	3947	-	ENSSFOP00015006032	651 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015003932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003932's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003932	-	57	51.639	ENSG00000160208	RRP1B	58	51.639	Homo_sapiens
ENSSFOG00015003932	-	51	45.619	ENSG00000160214	RRP1	67	45.619	Homo_sapiens
ENSSFOG00015003932	-	60	59.848	ENSAPOG00000007490	-	50	53.892	Acanthochromis_polyacanthus
ENSSFOG00015003932	-	54	46.479	ENSAMEG00000011448	RRP1	68	46.176	Ailuropoda_melanoleuca
ENSSFOG00015003932	-	62	50.413	ENSAMEG00000011401	RRP1B	66	49.580	Ailuropoda_melanoleuca
ENSSFOG00015003932	-	63	64.557	ENSAOCG00000017894	-	86	70.213	Amphiprion_ocellaris
ENSSFOG00015003932	-	60	56.818	ENSAPEG00000024150	-	52	59.574	Amphiprion_percula
ENSSFOG00015003932	-	65	54.268	ENSATEG00000005045	-	55	55.128	Anabas_testudineus
ENSSFOG00015003932	-	58	54.206	ENSACAG00000017851	RRP1B	56	50.862	Anolis_carolinensis
ENSSFOG00015003932	-	50	44.272	ENSANAG00000037815	RRP1	69	44.377	Aotus_nancymaae
ENSSFOG00015003932	-	60	50.000	ENSBTAG00000017418	RRP1B	51	40.657	Bos_taurus
ENSSFOG00015003932	-	54	43.059	ENSBTAG00000003981	RRP1	73	43.598	Bos_taurus
ENSSFOG00015003932	-	58	42.368	ENSCJAG00000043205	RRP1	64	45.317	Callithrix_jacchus
ENSSFOG00015003932	-	56	48.739	ENSCAFG00000010621	RRP1B	61	49.580	Canis_familiaris
ENSSFOG00015003932	-	58	43.236	ENSCAFG00000010646	RRP1	74	45.892	Canis_familiaris
ENSSFOG00015003932	-	58	43.236	ENSCAFG00020018979	RRP1	68	48.640	Canis_lupus_dingo
ENSSFOG00015003932	-	57	48.739	ENSCAFG00020018901	RRP1B	59	49.580	Canis_lupus_dingo
ENSSFOG00015003932	-	54	43.909	ENSCHIG00000020948	RRP1	69	46.224	Capra_hircus
ENSSFOG00015003932	-	57	50.847	ENSCHIG00000021519	RRP1B	60	50.000	Capra_hircus
ENSSFOG00015003932	-	51	43.732	ENSTSYG00000012831	RRP1	70	43.149	Carlito_syrichta
ENSSFOG00015003932	-	57	40.458	ENSCAPG00000008576	RRP1	80	44.548	Cavia_aperea
ENSSFOG00015003932	-	57	50.442	ENSCPOG00000002396	RRP1B	61	50.442	Cavia_porcellus
ENSSFOG00015003932	-	51	44.713	ENSCPOG00000038986	RRP1	68	44.411	Cavia_porcellus
ENSSFOG00015003932	-	58	41.689	ENSCCAG00000029828	RRP1	67	44.411	Cebus_capucinus
ENSSFOG00015003932	-	51	44.713	ENSCATG00000015632	RRP1	67	45.045	Cercocebus_atys
ENSSFOG00015003932	-	51	45.045	ENSCLAG00000011639	RRP1	68	46.224	Chinchilla_lanigera
ENSSFOG00015003932	-	51	44.411	ENSCGRG00001011920	Rrp1	70	44.109	Cricetulus_griseus_chok1gshd
ENSSFOG00015003932	-	51	44.411	ENSCGRG00000008915	Rrp1	70	44.109	Cricetulus_griseus_crigri
ENSSFOG00015003932	-	60	62.637	ENSCSEG00000020711	-	92	48.628	Cynoglossus_semilaevis
ENSSFOG00015003932	-	57	49.598	ENSCVAG00000017568	-	82	50.578	Cyprinodon_variegatus
ENSSFOG00015003932	-	54	51.042	ENSDARG00000103337	rrp1	56	51.042	Danio_rerio
ENSSFOG00015003932	-	51	46.334	ENSDNOG00000019880	RRP1	69	47.130	Dasypus_novemcinctus
ENSSFOG00015003932	-	53	55.000	ENSETEG00000019489	RRP1B	54	54.651	Echinops_telfairi
ENSSFOG00015003932	-	56	45.355	ENSEASG00005001673	RRP1	70	48.943	Equus_asinus_asinus
ENSSFOG00015003932	-	64	41.080	ENSECAG00000015703	RRP1	71	48.338	Equus_caballus
ENSSFOG00015003932	-	63	60.484	ENSELUG00000015885	-	89	52.913	Esox_lucius
ENSSFOG00015003932	-	57	49.180	ENSFCAG00000010272	RRP1B	60	49.180	Felis_catus
ENSSFOG00015003932	-	60	44.081	ENSFCAG00000008434	RRP1	68	47.734	Felis_catus
ENSSFOG00015003932	-	54	45.515	ENSFALG00000002024	RRP1B	61	46.645	Ficedula_albicollis
ENSSFOG00015003932	-	65	39.443	ENSFDAG00000013728	RRP1	68	44.713	Fukomys_damarensis
ENSSFOG00015003932	-	59	44.928	ENSFDAG00000010899	RRP1B	67	47.934	Fukomys_damarensis
ENSSFOG00015003932	-	85	51.323	ENSFHEG00000016314	-	58	50.392	Fundulus_heteroclitus
ENSSFOG00015003932	-	57	61.905	ENSGMOG00000001953	-	61	61.905	Gadus_morhua
ENSSFOG00015003932	-	67	64.567	ENSGACG00000001438	rrp1	70	64.567	Gasterosteus_aculeatus
ENSSFOG00015003932	-	51	46.526	ENSGGOG00000000173	RRP1	67	46.526	Gorilla_gorilla
ENSSFOG00015003932	-	57	51.639	ENSGGOG00000012069	RRP1B	58	51.639	Gorilla_gorilla
ENSSFOG00015003932	-	61	48.696	ENSHGLG00000004968	RRP1B	59	48.696	Heterocephalus_glaber_female
ENSSFOG00015003932	-	51	45.317	ENSHGLG00000017085	RRP1	65	45.015	Heterocephalus_glaber_female
ENSSFOG00015003932	-	56	48.696	ENSHGLG00100002232	RRP1B	55	48.696	Heterocephalus_glaber_male
ENSSFOG00015003932	-	55	54.545	ENSIPUG00000000673	-	64	49.280	Ictalurus_punctatus
ENSSFOG00015003932	-	57	47.899	ENSSTOG00000011790	RRP1B	58	47.107	Ictidomys_tridecemlineatus
ENSSFOG00015003932	-	55	44.663	ENSSTOG00000011116	RRP1	69	45.317	Ictidomys_tridecemlineatus
ENSSFOG00015003932	-	51	44.109	ENSJJAG00000018886	Rrp1	69	44.109	Jaculus_jaculus
ENSSFOG00015003932	-	68	56.757	ENSKMAG00000005539	rrp1	78	56.463	Kryptolebias_marmoratus
ENSSFOG00015003932	-	53	48.588	ENSLBEG00000021417	RRP1	92	52.116	Labrus_bergylta
ENSSFOG00015003932	-	64	46.702	ENSLACG00000017332	-	70	44.250	Latimeria_chalumnae
ENSSFOG00015003932	-	60	56.164	ENSLOCG00000004064	-	66	56.250	Lepisosteus_oculatus
ENSSFOG00015003932	-	50	48.739	ENSLAFG00000000766	RRP1B	76	45.797	Loxodonta_africana
ENSSFOG00015003932	-	51	46.291	ENSLAFG00000022901	RRP1	72	45.994	Loxodonta_africana
ENSSFOG00015003932	-	51	45.921	ENSMFAG00000003202	RRP1	67	45.921	Macaca_fascicularis
ENSSFOG00015003932	-	51	45.619	ENSMMUG00000012304	RRP1	67	45.619	Macaca_mulatta
ENSSFOG00015003932	-	51	45.317	ENSMNEG00000031210	RRP1	67	45.317	Macaca_nemestrina
ENSSFOG00015003932	-	50	45.872	ENSMLEG00000037797	RRP1	72	45.872	Mandrillus_leucophaeus
ENSSFOG00015003932	-	74	49.127	ENSMAMG00000007131	-	52	53.659	Mastacembelus_armatus
ENSSFOG00015003932	-	51	33.033	ENSMAUG00000017653	Rrp1	67	37.462	Mesocricetus_auratus
ENSSFOG00015003932	-	51	46.224	ENSMICG00000004700	RRP1	71	46.224	Microcebus_murinus
ENSSFOG00015003932	-	57	47.244	ENSMMOG00000019175	rrp1	90	47.258	Mola_mola
ENSSFOG00015003932	-	52	47.801	ENSMODG00000021033	RRP1B	50	43.781	Monodelphis_domestica
ENSSFOG00015003932	-	57	51.872	ENSMALG00000010310	rrp1	91	51.337	Monopterus_albus
ENSSFOG00015003932	-	57	41.920	ENSMPUG00000009826	RRP1	77	42.239	Mustela_putorius_furo
ENSSFOG00015003932	-	52	43.567	ENSMPUG00000009810	RRP1B	55	42.424	Mustela_putorius_furo
ENSSFOG00015003932	-	59	45.000	ENSNGAG00000021073	Rrp1b	70	45.000	Nannospalax_galili
ENSSFOG00015003932	-	51	46.828	ENSNLEG00000034734	RRP1	67	46.224	Nomascus_leucogenys
ENSSFOG00015003932	-	57	51.639	ENSNLEG00000001490	RRP1B	61	51.639	Nomascus_leucogenys
ENSSFOG00015003932	-	57	44.928	ENSODEG00000013177	RRP1B	61	44.853	Octodon_degus
ENSSFOG00015003932	-	50	46.012	ENSOANG00000006472	-	90	43.027	Ornithorhynchus_anatinus
ENSSFOG00015003932	-	54	47.107	ENSOCUG00000025931	RRP1B	61	47.107	Oryctolagus_cuniculus
ENSSFOG00015003932	-	62	53.911	ENSORLG00020007199	-	52	54.438	Oryzias_latipes_hni
ENSSFOG00015003932	-	55	55.462	ENSORLG00015004425	-	53	56.083	Oryzias_latipes_hsok
ENSSFOG00015003932	-	54	41.530	ENSOGAG00000006105	RRP1	71	44.444	Otolemur_garnettii
ENSSFOG00015003932	-	54	53.933	ENSOGAG00000009872	RRP1B	70	53.933	Otolemur_garnettii
ENSSFOG00015003932	-	56	50.820	ENSPPAG00000035319	RRP1B	60	50.820	Pan_paniscus
ENSSFOG00015003932	-	51	45.921	ENSPPAG00000029050	RRP1	67	45.921	Pan_paniscus
ENSSFOG00015003932	-	52	44.118	ENSPPRG00000010356	RRP1B	50	40.722	Panthera_pardus
ENSSFOG00015003932	-	60	44.162	ENSPPRG00000010656	RRP1	69	47.734	Panthera_pardus
ENSSFOG00015003932	-	59	50.000	ENSPTIG00000016894	RRP1B	80	50.000	Panthera_tigris_altaica
ENSSFOG00015003932	-	57	50.000	ENSPTRG00000013958	RRP1B	58	50.000	Pan_troglodytes
ENSSFOG00015003932	-	51	45.921	ENSPTRG00000013962	RRP1	67	45.921	Pan_troglodytes
ENSSFOG00015003932	-	51	44.713	ENSPANG00000015097	RRP1	67	45.045	Papio_anubis
ENSSFOG00015003932	-	54	39.722	ENSPMGG00000007512	-	80	39.326	Periophthalmus_magnuspinnatus
ENSSFOG00015003932	-	51	44.411	ENSPEMG00000018421	Rrp1	70	45.455	Peromyscus_maniculatus_bairdii
ENSSFOG00015003932	-	57	50.420	ENSPEMG00000022490	Rrp1b	60	47.101	Peromyscus_maniculatus_bairdii
ENSSFOG00015003932	-	63	41.205	ENSPCIG00000015523	-	69	45.614	Phascolarctos_cinereus
ENSSFOG00015003932	-	80	46.053	ENSPCIG00000015513	RRP1B	58	51.613	Phascolarctos_cinereus
ENSSFOG00015003932	-	65	47.653	ENSPLAG00000016684	-	50	50.798	Poecilia_latipinna
ENSSFOG00015003932	-	51	45.921	ENSPPYG00000011474	RRP1	77	40.000	Pongo_abelii
ENSSFOG00015003932	-	57	51.639	ENSPPYG00000011470	RRP1B	58	51.639	Pongo_abelii
ENSSFOG00015003932	-	51	44.611	ENSPCOG00000017706	RRP1	70	44.411	Propithecus_coquereli
ENSSFOG00015003932	-	51	41.692	ENSRNOG00000001203	Rrp1	71	44.578	Rattus_norvegicus
ENSSFOG00015003932	-	51	44.713	ENSRBIG00000032082	RRP1	67	45.181	Rhinopithecus_bieti
ENSSFOG00015003932	-	51	44.713	ENSRROG00000039799	RRP1	67	45.181	Rhinopithecus_roxellana
ENSSFOG00015003932	-	58	41.425	ENSSBOG00000034689	RRP1	67	44.109	Saimiri_boliviensis_boliviensis
ENSSFOG00015003932	-	76	51.685	ENSSMAG00000016847	-	86	49.485	Scophthalmus_maximus
ENSSFOG00015003932	-	63	60.317	ENSSDUG00000000551	-	54	56.338	Seriola_dumerili
ENSSFOG00015003932	-	63	59.524	ENSSLDG00000002538	-	54	55.634	Seriola_lalandi_dorsalis
ENSSFOG00015003932	-	60	40.461	ENSSARG00000003108	-	59	46.032	Sorex_araneus
ENSSFOG00015003932	-	71	55.357	ENSSPAG00000005370	-	56	59.236	Stegastes_partitus
ENSSFOG00015003932	-	56	58.750	ENSSSCG00000021698	RRP1B	59	59.036	Sus_scrofa
ENSSFOG00015003932	-	52	52.059	ENSTRUG00000017592	rrp1	91	52.059	Takifugu_rubripes
ENSSFOG00015003932	-	60	58.416	ENSTNIG00000005053	rrp1	66	58.416	Tetraodon_nigroviridis
ENSSFOG00015003932	-	60	44.444	ENSTBEG00000000422	RRP1B	77	45.482	Tupaia_belangeri
ENSSFOG00015003932	-	57	43.802	ENSTTRG00000000723	RRP1B	60	43.802	Tursiops_truncatus
ENSSFOG00015003932	-	63	45.000	ENSUAMG00000026765	RRP1B	73	48.739	Ursus_americanus
ENSSFOG00015003932	-	53	46.821	ENSUMAG00000025507	RRP1	71	46.358	Ursus_maritimus
ENSSFOG00015003932	-	56	49.138	ENSUMAG00000025510	RRP1B	90	45.317	Ursus_maritimus
ENSSFOG00015003932	-	56	48.739	ENSVVUG00000024509	RRP1B	61	49.580	Vulpes_vulpes
ENSSFOG00015003932	-	61	43.169	ENSXETG00000013683	rrp1b	63	45.055	Xenopus_tropicalis
ENSSFOG00015003932	-	58	50.131	ENSXMAG00000023123	-	59	53.276	Xiphophorus_maculatus