EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015003943 (Gene tree)
Gene ID: 108920546
Gene Symbol: -
Alias: -
Full Name: E3 SUMO-protein ligase RanBP2-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 17794 bases
Position: chrKV411293.1:1198944-1216737
Accession: 108920546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006064	zf-RanBP	PF00641.18	1.1e-23	1	3
ENSSFOP00015006064	zf-RanBP	PF00641.18	1.1e-23	2	3
ENSSFOP00015006064	zf-RanBP	PF00641.18	1.1e-23	3	3
ENSSFOP00015006041	zf-RanBP	PF00641.18	1.1e-23	1	3
ENSSFOP00015006041	zf-RanBP	PF00641.18	1.1e-23	2	3
ENSSFOP00015006041	zf-RanBP	PF00641.18	1.1e-23	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015006138	-	9201	-	ENSSFOP00015006041	2921 (aa)	-	-
ENSSFOT00015006161	-	9123	XM_018729365	ENSSFOP00015006064	2895 (aa)	XP_018584881	A0A1W4Y9F0

Gene Model

Click here to download ENSSFOG00015003943's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015003943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015003943	-	99	63.506	ENSSFOG00015023201	RANBP2	99	63.418

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015003943	-	99	53.998	ENSG00000153201	RANBP2	90	67.391	Homo_sapiens
ENSSFOG00015003943	-	99	65.888	ENSAPOG00000017146	si:ch1073-55a19.2	99	65.888	Acanthochromis_polyacanthus
ENSSFOG00015003943	-	99	56.296	ENSAMEG00000013078	RANBP2	99	54.219	Ailuropoda_melanoleuca
ENSSFOG00015003943	-	99	62.719	ENSACIG00000001203	si:ch1073-55a19.2	99	62.707	Amphilophus_citrinellus
ENSSFOG00015003943	-	99	66.014	ENSAPEG00000012495	si:ch1073-55a19.2	99	66.014	Amphiprion_percula
ENSSFOG00015003943	-	99	66.307	ENSATEG00000001716	si:ch1073-55a19.2	99	66.307	Anabas_testudineus
ENSSFOG00015003943	-	95	53.120	ENSACAG00000002091	RANBP2	100	53.081	Anolis_carolinensis
ENSSFOG00015003943	-	99	53.406	ENSANAG00000023124	RANBP2	99	53.490	Aotus_nancymaae
ENSSFOG00015003943	-	99	64.750	ENSACLG00000020500	si:ch1073-55a19.2	99	61.876	Astatotilapia_calliptera
ENSSFOG00015003943	-	99	54.006	ENSBTAG00000000152	RANBP2	99	54.726	Bos_taurus
ENSSFOG00015003943	-	99	53.134	ENSCJAG00000001189	RANBP2	99	53.042	Callithrix_jacchus
ENSSFOG00015003943	-	90	75.000	ENSCAFG00000023061	RANBP2	99	75.000	Canis_familiaris
ENSSFOG00015003943	-	97	59.732	ENSCAFG00020009314	RANBP2	99	55.308	Canis_lupus_dingo
ENSSFOG00015003943	-	99	53.686	ENSCHIG00000012686	RANBP2	99	53.943	Capra_hircus
ENSSFOG00015003943	-	99	54.557	ENSTSYG00000001656	RANBP2	99	54.557	Carlito_syrichta
ENSSFOG00015003943	-	99	49.438	ENSCAPG00000010687	RANBP2	99	49.574	Cavia_aperea
ENSSFOG00015003943	-	99	53.591	ENSCPOG00000000392	RANBP2	99	54.251	Cavia_porcellus
ENSSFOG00015003943	-	99	53.493	ENSCCAG00000028166	RANBP2	99	53.421	Cebus_capucinus
ENSSFOG00015003943	-	99	56.296	ENSCATG00000032597	RANBP2	99	51.429	Cercocebus_atys
ENSSFOG00015003943	-	99	54.457	ENSCLAG00000010533	RANBP2	99	54.397	Chinchilla_lanigera
ENSSFOG00015003943	-	99	56.296	ENSCSAG00000017019	RANBP2	99	53.793	Chlorocebus_sabaeus
ENSSFOG00015003943	-	62	66.942	ENSCHOG00000012659	-	58	66.805	Choloepus_hoffmanni
ENSSFOG00015003943	-	99	56.835	ENSCPBG00000006985	RANBP2	99	55.122	Chrysemys_picta_bellii
ENSSFOG00015003943	-	99	55.989	ENSCANG00000041469	RANBP2	99	62.112	Colobus_angolensis_palliatus
ENSSFOG00015003943	-	99	53.951	ENSCGRG00001000642	Ranbp2	99	54.007	Cricetulus_griseus_chok1gshd
ENSSFOG00015003943	-	99	53.951	ENSCGRG00000008995	Ranbp2	99	54.007	Cricetulus_griseus_crigri
ENSSFOG00015003943	-	99	59.252	ENSCSEG00000013280	si:ch1073-55a19.2	99	59.506	Cynoglossus_semilaevis
ENSSFOG00015003943	-	99	59.905	ENSCVAG00000016050	si:ch1073-55a19.2	99	59.964	Cyprinodon_variegatus
ENSSFOG00015003943	-	99	56.582	ENSDARG00000093125	RANBP2	99	56.764	Danio_rerio
ENSSFOG00015003943	-	99	56.296	ENSDNOG00000040501	RANBP2	99	54.458	Dasypus_novemcinctus
ENSSFOG00015003943	-	99	54.795	ENSDORG00000002206	Ranbp2	99	54.743	Dipodomys_ordii
ENSSFOG00015003943	-	72	58.107	ENSETEG00000008891	-	66	58.107	Echinops_telfairi
ENSSFOG00015003943	-	98	53.611	ENSEBUG00000010057	si:ch1073-55a19.2	83	53.763	Eptatretus_burgeri
ENSSFOG00015003943	-	99	56.296	ENSEASG00005012918	RANBP2	99	53.906	Equus_asinus_asinus
ENSSFOG00015003943	-	99	56.296	ENSECAG00000008458	RANBP2	94	57.679	Equus_caballus
ENSSFOG00015003943	-	80	68.720	ENSEEUG00000007806	RANBP2	79	68.720	Erinaceus_europaeus
ENSSFOG00015003943	-	99	71.739	ENSELUG00000007763	si:ch1073-55a19.2	94	70.960	Esox_lucius
ENSSFOG00015003943	-	99	52.951	ENSFALG00000003519	RANBP2	99	52.951	Ficedula_albicollis
ENSSFOG00015003943	-	99	51.503	ENSFDAG00000016912	RANBP2	99	53.837	Fukomys_damarensis
ENSSFOG00015003943	-	99	63.084	ENSFHEG00000009774	si:ch1073-55a19.2	99	62.206	Fundulus_heteroclitus
ENSSFOG00015003943	-	99	76.259	ENSGMOG00000007071	si:ch1073-55a19.2	94	77.698	Gadus_morhua
ENSSFOG00015003943	-	99	62.604	ENSGAFG00000010966	si:ch1073-55a19.2	99	61.872	Gambusia_affinis
ENSSFOG00015003943	-	99	63.413	ENSGACG00000006831	si:ch1073-55a19.2	99	62.571	Gasterosteus_aculeatus
ENSSFOG00015003943	-	94	54.930	ENSGAGG00000025039	RANBP2	99	54.971	Gopherus_agassizii
ENSSFOG00015003943	-	99	64.498	ENSHBUG00000000053	si:ch1073-55a19.2	99	64.299	Haplochromis_burtoni
ENSSFOG00015003943	-	99	54.485	ENSHGLG00000018887	RANBP2	99	54.540	Heterocephalus_glaber_female
ENSSFOG00015003943	-	99	54.154	ENSHGLG00100007365	RANBP2	99	54.235	Heterocephalus_glaber_male
ENSSFOG00015003943	-	99	60.574	ENSHCOG00000019596	si:ch1073-55a19.2	99	60.805	Hippocampus_comes
ENSSFOG00015003943	-	99	59.661	ENSIPUG00000019614	si:ch1073-55a19.2	99	59.721	Ictalurus_punctatus
ENSSFOG00015003943	-	99	51.986	ENSSTOG00000019518	RANBP2	99	53.980	Ictidomys_tridecemlineatus
ENSSFOG00015003943	-	99	53.172	ENSJJAG00000021292	Ranbp2	51	51.696	Jaculus_jaculus
ENSSFOG00015003943	-	99	64.773	ENSKMAG00000001158	si:ch1073-55a19.2	99	64.732	Kryptolebias_marmoratus
ENSSFOG00015003943	-	94	60.764	ENSLBEG00000027979	si:ch1073-55a19.2	99	60.729	Labrus_bergylta
ENSSFOG00015003943	-	99	54.985	ENSLACG00000009728	RANBP2	99	55.251	Latimeria_chalumnae
ENSSFOG00015003943	-	97	72.477	ENSLOCG00000010333	si:ch1073-55a19.2	98	72.477	Lepisosteus_oculatus
ENSSFOG00015003943	-	99	52.650	ENSLAFG00000000740	RANBP2	99	54.545	Loxodonta_africana
ENSSFOG00015003943	-	99	56.296	ENSMFAG00000029029	RANBP2	99	53.588	Macaca_fascicularis
ENSSFOG00015003943	-	99	56.296	ENSMMUG00000021019	RANBP2	99	53.588	Macaca_mulatta
ENSSFOG00015003943	-	99	56.296	ENSMNEG00000043706	RANBP2	99	53.529	Macaca_nemestrina
ENSSFOG00015003943	-	99	56.296	ENSMLEG00000037350	RANBP2	99	56.119	Mandrillus_leucophaeus
ENSSFOG00015003943	-	99	63.586	ENSMAMG00000017900	si:ch1073-55a19.2	99	63.642	Mastacembelus_armatus
ENSSFOG00015003943	-	99	64.687	ENSMZEG00005010956	si:ch1073-55a19.2	99	61.908	Maylandia_zebra
ENSSFOG00015003943	-	99	51.782	ENSMGAG00000014831	-	99	52.401	Meleagris_gallopavo
ENSSFOG00015003943	-	99	53.810	ENSMAUG00000013313	Ranbp2	99	54.111	Mesocricetus_auratus
ENSSFOG00015003943	-	99	52.499	ENSMICG00000011864	RANBP2	66	54.006	Microcebus_murinus
ENSSFOG00015003943	-	99	53.591	ENSMOCG00000012516	Ranbp2	99	53.463	Microtus_ochrogaster
ENSSFOG00015003943	-	99	61.416	ENSMMOG00000005743	si:ch1073-55a19.2	58	58.869	Mola_mola
ENSSFOG00015003943	-	99	56.991	ENSMODG00000002914	RANBP2	99	56.895	Monodelphis_domestica
ENSSFOG00015003943	-	99	64.541	ENSMALG00000004359	si:ch1073-55a19.2	99	64.796	Monopterus_albus
ENSSFOG00015003943	-	99	52.255	ENSMUSG00000003226	Ranbp2	99	53.571	Mus_musculus
ENSSFOG00015003943	-	99	53.019	MGP_PahariEiJ_G0030751	Ranbp2	99	53.080	Mus_pahari
ENSSFOG00015003943	-	99	52.191	MGP_SPRETEiJ_G0016147	Ranbp2	99	53.571	Mus_spretus
ENSSFOG00015003943	-	99	52.230	ENSMPUG00000010754	RANBP2	99	52.809	Mustela_putorius_furo
ENSSFOG00015003943	-	99	56.296	ENSMLUG00000005555	RANBP2	99	53.685	Myotis_lucifugus
ENSSFOG00015003943	-	99	53.804	ENSNGAG00000016154	Ranbp2	99	53.986	Nannospalax_galili
ENSSFOG00015003943	-	99	64.259	ENSNBRG00000004587	si:ch1073-55a19.2	99	64.362	Neolamprologus_brichardi
ENSSFOG00015003943	-	99	53.939	ENSNLEG00000007501	RANBP2	99	53.796	Nomascus_leucogenys
ENSSFOG00015003943	-	91	56.472	ENSOPRG00000009720	-	94	56.796	Ochotona_princeps
ENSSFOG00015003943	-	99	53.119	ENSODEG00000013212	RANBP2	99	54.809	Octodon_degus
ENSSFOG00015003943	-	99	64.702	ENSONIG00000004346	si:ch1073-55a19.2	99	61.656	Oreochromis_niloticus
ENSSFOG00015003943	-	78	52.459	ENSOANG00000004894	RANBP2	99	54.937	Ornithorhynchus_anatinus
ENSSFOG00015003943	-	99	54.404	ENSOCUG00000001165	RANBP2	99	54.643	Oryctolagus_cuniculus
ENSSFOG00015003943	-	99	61.957	ENSORLG00000015523	si:ch1073-55a19.2	99	61.859	Oryzias_latipes
ENSSFOG00015003943	-	99	61.062	ENSORLG00020003797	si:ch1073-55a19.2	99	61.364	Oryzias_latipes_hni
ENSSFOG00015003943	-	99	61.200	ENSORLG00015004994	si:ch1073-55a19.2	99	61.568	Oryzias_latipes_hsok
ENSSFOG00015003943	-	99	60.925	ENSOMEG00000022969	si:ch1073-55a19.2	99	61.553	Oryzias_melastigma
ENSSFOG00015003943	-	99	54.688	ENSOGAG00000028976	RANBP2	99	54.942	Otolemur_garnettii
ENSSFOG00015003943	-	99	53.559	ENSOARG00000000558	RANBP2	99	54.294	Ovis_aries
ENSSFOG00015003943	-	99	56.296	ENSPANG00000000990	RANBP2	99	51.429	Papio_anubis
ENSSFOG00015003943	-	99	71.004	ENSPKIG00000010971	RANBP2	99	71.014	Paramormyrops_kingsleyae
ENSSFOG00015003943	-	94	50.838	ENSPKIG00000021054	-	99	53.237	Paramormyrops_kingsleyae
ENSSFOG00015003943	-	99	54.534	ENSPSIG00000007182	RANBP2	99	54.837	Pelodiscus_sinensis
ENSSFOG00015003943	-	93	54.068	ENSPEMG00000021565	Ranbp2	99	54.033	Peromyscus_maniculatus_bairdii
ENSSFOG00015003943	-	84	49.550	ENSPMAG00000007195	si:ch1073-55a19.2	100	62.774	Petromyzon_marinus
ENSSFOG00015003943	-	99	54.718	ENSPCIG00000013912	RANBP2	99	53.409	Phascolarctos_cinereus
ENSSFOG00015003943	-	99	62.270	ENSPFOG00000007377	si:ch1073-55a19.2	99	62.476	Poecilia_formosa
ENSSFOG00015003943	-	99	62.285	ENSPLAG00000012373	si:ch1073-55a19.2	99	62.923	Poecilia_latipinna
ENSSFOG00015003943	-	99	62.334	ENSPMEG00000005561	si:ch1073-55a19.2	99	62.476	Poecilia_mexicana
ENSSFOG00015003943	-	99	61.978	ENSPREG00000013331	si:ch1073-55a19.2	99	62.279	Poecilia_reticulata
ENSSFOG00015003943	-	70	53.266	ENSPPYG00000012139	-	99	53.637	Pongo_abelii
ENSSFOG00015003943	-	51	59.155	ENSPPYG00000029793	-	99	59.937	Pongo_abelii
ENSSFOG00015003943	-	95	67.846	ENSPCAG00000000957	RANBP2	98	67.846	Procavia_capensis
ENSSFOG00015003943	-	99	55.797	ENSPCOG00000008879	RANBP2	99	54.599	Propithecus_coquereli
ENSSFOG00015003943	-	98	57.420	ENSPVAG00000003883	RANBP2	93	57.295	Pteropus_vampyrus
ENSSFOG00015003943	-	99	64.665	ENSPNYG00000015971	si:ch1073-55a19.2	99	64.425	Pundamilia_nyererei
ENSSFOG00015003943	-	99	64.171	ENSPNAG00000026129	si:ch1073-55a19.2	99	64.543	Pygocentrus_nattereri
ENSSFOG00015003943	-	99	53.646	ENSRNOG00000000796	Ranbp2	99	53.972	Rattus_norvegicus
ENSSFOG00015003943	-	99	52.361	ENSRBIG00000043515	RANBP2	99	52.328	Rhinopithecus_bieti
ENSSFOG00015003943	-	99	54.179	ENSRROG00000026113	RANBP2	99	54.416	Rhinopithecus_roxellana
ENSSFOG00015003943	-	99	53.014	ENSSBOG00000035336	RANBP2	99	53.302	Saimiri_boliviensis_boliviensis
ENSSFOG00015003943	-	99	54.931	ENSSHAG00000004676	RANBP2	99	53.944	Sarcophilus_harrisii
ENSSFOG00015003943	-	99	65.179	ENSSMAG00000007331	si:ch1073-55a19.2	99	65.179	Scophthalmus_maximus
ENSSFOG00015003943	-	99	65.639	ENSSDUG00000013160	si:ch1073-55a19.2	99	65.639	Seriola_dumerili
ENSSFOG00015003943	-	99	63.621	ENSSLDG00000023392	si:ch1073-55a19.2	99	63.493	Seriola_lalandi_dorsalis
ENSSFOG00015003943	-	90	60.507	ENSSARG00000005595	RANBP2	75	60.364	Sorex_araneus
ENSSFOG00015003943	-	99	63.235	ENSSPAG00000008000	si:ch1073-55a19.2	99	65.848	Stegastes_partitus
ENSSFOG00015003943	-	99	55.556	ENSSSCG00000008136	RANBP2	98	53.726	Sus_scrofa
ENSSFOG00015003943	-	99	52.731	ENSTGUG00000009571	RANBP2	99	53.063	Taeniopygia_guttata
ENSSFOG00015003943	-	91	59.667	ENSTTRG00000007400	RANBP2	92	56.000	Tursiops_truncatus
ENSSFOG00015003943	-	93	56.296	ENSUAMG00000020025	RANBP2	99	52.392	Ursus_americanus
ENSSFOG00015003943	-	93	68.638	ENSVPAG00000006676	RANBP2	91	69.867	Vicugna_pacos
ENSSFOG00015003943	-	97	60.067	ENSVVUG00000014899	RANBP2	99	55.362	Vulpes_vulpes
ENSSFOG00015003943	-	94	50.814	ENSXETG00000016006	ranbp2	99	51.635	Xenopus_tropicalis
ENSSFOG00015003943	-	99	60.660	ENSXCOG00000000752	si:ch1073-55a19.2	99	60.813	Xiphophorus_couchianus
ENSSFOG00015003943	-	99	62.163	ENSXMAG00000003519	si:ch1073-55a19.2	99	62.239	Xiphophorus_maculatus