EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015004010 (Gene tree)
Gene ID: 108928046
Gene Symbol: -
Alias: -
Full Name: TATA-binding protein-associated factor 2N-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 9533 bases
Position: chrKV410884.1:2742116-2751648
Accession: 108928046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006133	zf-RanBP	PF00641.18	3.7e-09	1	1
ENSSFOP00015006124	zf-RanBP	PF00641.18	4e-09	1	1
ENSSFOP00015006133	RRM_1	PF00076.22	1.8e-12	1	1
ENSSFOP00015006124	RRM_1	PF00076.22	8.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015006223	-	2503	-	ENSSFOP00015006124	428 (aa)	-	-
ENSSFOT00015006232	-	2422	XM_018741800	ENSSFOP00015006133	401 (aa)	XP_018597316	A0A1W4Z9V3

Gene Model

Click here to download ENSSFOG00015004010's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03022	Basal transcription factors	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004010's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015004010	-	100	63.288	ENSSFOG00015004086	taf15	89	68.766

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004010	-	84	52.972	ENSELUG00000016061	taf15	84	58.505	Esox_lucius
ENSSFOG00015004010	-	100	59.397	ENSLOCG00000001615	taf15	86	57.368	Lepisosteus_oculatus
ENSSFOG00015004010	-	100	76.238	ENSPKIG00000014354	-	86	78.006	Paramormyrops_kingsleyae
ENSSFOG00015004010	-	84	60.794	ENSPKIG00000010664	taf15	89	61.975	Paramormyrops_kingsleyae
ENSSFOG00015004010	-	84	61.518	ENSPNAG00000001144	taf15	85	62.703	Pygocentrus_nattereri