EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015004086 (Gene tree)
Gene ID: 108922479
Gene Symbol: taf15
Alias: fa11g05|wu:fa11g05|wu:fc02g02|zgc:158363
Full Name: TATA-binding protein-associated factor 2N-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 10601 bases
Position: chrKV410815.1:1706548-1717148
Accession: 108922479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006219	zf-RanBP	PF00641.18	1.3e-08	1	1
ENSSFOP00015006219	RRM_1	PF00076.22	2.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015006318	-	1866	XM_018732642	ENSSFOP00015006219	425 (aa)	XP_018588158	A0A1W4YIH7

Gene Model

Click here to download ENSSFOG00015004086's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03022	Basal transcription factors	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004086's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015004086	taf15	89	68.766	ENSSFOG00015004010	-	100	63.288

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004086	taf15	57	68.304	ENSGMOG00000016823	taf15	61	76.289	Gadus_morhua
ENSSFOG00015004086	taf15	100	58.851	ENSLOCG00000001615	taf15	57	67.241	Lepisosteus_oculatus
ENSSFOG00015004086	taf15	100	64.368	ENSPKIG00000014354	-	100	65.367	Paramormyrops_kingsleyae
ENSSFOG00015004086	taf15	100	67.841	ENSPKIG00000010664	taf15	100	65.410	Paramormyrops_kingsleyae
ENSSFOG00015004086	taf15	57	64.344	ENSXCOG00000012853	taf15	53	82.609	Xiphophorus_couchianus