EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015004093 (Gene tree)
Gene ID: 108936963
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 4320 bases
Position: chrKV410796.1:640257-644576
Accession: 108936963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006233	tRNA_int_end_N2	PF12928.7	6.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015006332	-	2575	XM_018756633	ENSSFOP00015006233	419 (aa)	XP_018612149	-

Gene Model

Click here to download ENSSFOG00015004093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004093	tsen54	100	44.138	ENSG00000182173	TSEN54	100	66.667	Homo_sapiens
ENSSFOG00015004093	tsen54	99	56.368	ENSAPOG00000009659	tsen54	99	56.132	Acanthochromis_polyacanthus
ENSSFOG00015004093	tsen54	100	42.129	ENSAMEG00000009414	TSEN54	81	45.103	Ailuropoda_melanoleuca
ENSSFOG00015004093	tsen54	99	56.000	ENSAOCG00000000152	tsen54	79	55.765	Amphiprion_ocellaris
ENSSFOG00015004093	tsen54	99	55.059	ENSAPEG00000018931	tsen54	78	54.824	Amphiprion_percula
ENSSFOG00015004093	tsen54	99	53.899	ENSATEG00000019860	tsen54	81	53.899	Anabas_testudineus
ENSSFOG00015004093	tsen54	100	47.319	ENSAPLG00000009419	TSEN54	94	47.086	Anas_platyrhynchos
ENSSFOG00015004093	tsen54	99	44.907	ENSACAG00000006714	TSEN54	81	44.444	Anolis_carolinensis
ENSSFOG00015004093	tsen54	100	43.807	ENSANAG00000024061	TSEN54	80	45.057	Aotus_nancymaae
ENSSFOG00015004093	tsen54	99	54.118	ENSACLG00000019800	tsen54	80	53.774	Astatotilapia_calliptera
ENSSFOG00015004093	tsen54	99	58.670	ENSAMXG00000006546	tsen54	80	58.432	Astyanax_mexicanus
ENSSFOG00015004093	tsen54	100	44.084	ENSBTAG00000000824	TSEN54	81	43.852	Bos_taurus
ENSSFOG00015004093	tsen54	100	42.989	ENSCJAG00000014278	TSEN54	80	44.598	Callithrix_jacchus
ENSSFOG00015004093	tsen54	100	44.369	ENSCAFG00000004798	TSEN54	81	45.287	Canis_familiaris
ENSSFOG00015004093	tsen54	100	44.369	ENSCAFG00020000312	TSEN54	81	45.287	Canis_lupus_dingo
ENSSFOG00015004093	tsen54	100	44.521	ENSCHIG00000019908	TSEN54	81	45.205	Capra_hircus
ENSSFOG00015004093	tsen54	100	42.369	ENSTSYG00000037439	TSEN54	94	42.694	Carlito_syrichta
ENSSFOG00015004093	tsen54	100	45.538	ENSCCAG00000036624	TSEN54	80	45.538	Cebus_capucinus
ENSSFOG00015004093	tsen54	100	44.321	ENSCATG00000042877	TSEN54	80	44.828	Cercocebus_atys
ENSSFOG00015004093	tsen54	100	45.012	ENSCLAG00000002924	TSEN54	80	44.755	Chinchilla_lanigera
ENSSFOG00015004093	tsen54	100	44.368	ENSCSAG00000004809	TSEN54	81	44.828	Chlorocebus_sabaeus
ENSSFOG00015004093	tsen54	99	46.047	ENSCPBG00000028071	TSEN54	81	46.528	Chrysemys_picta_bellii
ENSSFOG00015004093	tsen54	100	44.124	ENSCANG00000028053	TSEN54	81	45.057	Colobus_angolensis_palliatus
ENSSFOG00015004093	tsen54	100	42.166	ENSCGRG00001020029	Tsen54	81	41.935	Cricetulus_griseus_chok1gshd
ENSSFOG00015004093	tsen54	100	42.166	ENSCGRG00000016289	Tsen54	96	41.935	Cricetulus_griseus_crigri
ENSSFOG00015004093	tsen54	99	46.682	ENSCSEG00000020586	tsen54	99	46.209	Cynoglossus_semilaevis
ENSSFOG00015004093	tsen54	99	57.074	ENSDARG00000036844	tsen54	99	56.835	Danio_rerio
ENSSFOG00015004093	tsen54	100	43.508	ENSDNOG00000018452	TSEN54	81	44.898	Dasypus_novemcinctus
ENSSFOG00015004093	tsen54	100	45.667	ENSDORG00000004073	Tsen54	81	46.154	Dipodomys_ordii
ENSSFOG00015004093	tsen54	100	45.125	ENSEASG00005000579	TSEN54	81	44.898	Equus_asinus_asinus
ENSSFOG00015004093	tsen54	100	44.444	ENSECAG00000004924	TSEN54	81	44.124	Equus_caballus
ENSSFOG00015004093	tsen54	100	42.009	ENSEEUG00000008467	TSEN54	94	41.781	Erinaceus_europaeus
ENSSFOG00015004093	tsen54	99	55.000	ENSELUG00000017703	tsen54	76	54.318	Esox_lucius
ENSSFOG00015004093	tsen54	100	43.056	ENSFCAG00000023712	TSEN54	81	42.857	Felis_catus
ENSSFOG00015004093	tsen54	100	45.602	ENSFALG00000001119	TSEN54	81	46.296	Ficedula_albicollis
ENSSFOG00015004093	tsen54	100	46.154	ENSFDAG00000019090	TSEN54	93	46.154	Fukomys_damarensis
ENSSFOG00015004093	tsen54	99	53.380	ENSFHEG00000005470	tsen54	80	53.721	Fundulus_heteroclitus
ENSSFOG00015004093	tsen54	82	56.436	ENSGMOG00000013146	tsen54	83	56.436	Gadus_morhua
ENSSFOG00015004093	tsen54	100	42.989	ENSGALG00000047163	TSEN54	84	43.119	Gallus_gallus
ENSSFOG00015004093	tsen54	99	54.588	ENSGAFG00000005111	tsen54	80	54.824	Gambusia_affinis
ENSSFOG00015004093	tsen54	99	50.000	ENSGACG00000014987	tsen54	82	49.764	Gasterosteus_aculeatus
ENSSFOG00015004093	tsen54	100	46.759	ENSGAGG00000006825	TSEN54	81	46.528	Gopherus_agassizii
ENSSFOG00015004093	tsen54	100	44.368	ENSGGOG00000009417	TSEN54	84	45.517	Gorilla_gorilla
ENSSFOG00015004093	tsen54	97	46.539	ENSHBUG00000018296	tsen54	99	46.172	Haplochromis_burtoni
ENSSFOG00015004093	tsen54	100	45.199	ENSHGLG00000007979	TSEN54	81	45.199	Heterocephalus_glaber_female
ENSSFOG00015004093	tsen54	100	45.199	ENSHGLG00100005497	TSEN54	81	45.199	Heterocephalus_glaber_male
ENSSFOG00015004093	tsen54	99	50.831	ENSHCOG00000007481	tsen54	99	50.234	Hippocampus_comes
ENSSFOG00015004093	tsen54	99	49.522	ENSIPUG00000000590	tsen54	79	49.282	Ictalurus_punctatus
ENSSFOG00015004093	tsen54	100	43.692	ENSSTOG00000012883	TSEN54	81	43.692	Ictidomys_tridecemlineatus
ENSSFOG00015004093	tsen54	100	46.065	ENSJJAG00000007365	Tsen54	81	45.833	Jaculus_jaculus
ENSSFOG00015004093	tsen54	99	54.253	ENSKMAG00000006944	tsen54	81	53.917	Kryptolebias_marmoratus
ENSSFOG00015004093	tsen54	99	51.869	ENSLBEG00000004199	tsen54	80	52.103	Labrus_bergylta
ENSSFOG00015004093	tsen54	100	42.202	ENSLACG00000009497	TSEN54	84	42.202	Latimeria_chalumnae
ENSSFOG00015004093	tsen54	100	55.936	ENSLOCG00000011191	tsen54	81	55.708	Lepisosteus_oculatus
ENSSFOG00015004093	tsen54	55	48.276	ENSLAFG00000011655	TSEN54	80	43.750	Loxodonta_africana
ENSSFOG00015004093	tsen54	100	44.368	ENSMFAG00000000712	TSEN54	81	44.828	Macaca_fascicularis
ENSSFOG00015004093	tsen54	100	44.368	ENSMNEG00000029199	TSEN54	81	44.828	Macaca_nemestrina
ENSSFOG00015004093	tsen54	100	44.368	ENSMLEG00000044168	TSEN54	83	44.828	Mandrillus_leucophaeus
ENSSFOG00015004093	tsen54	99	55.952	ENSMAMG00000019773	tsen54	80	56.190	Mastacembelus_armatus
ENSSFOG00015004093	tsen54	99	53.647	ENSMZEG00005000884	tsen54	80	53.302	Maylandia_zebra
ENSSFOG00015004093	tsen54	100	42.529	ENSMGAG00000009556	TSEN54	81	44.084	Meleagris_gallopavo
ENSSFOG00015004093	tsen54	100	43.187	ENSMAUG00000016838	Tsen54	81	42.956	Mesocricetus_auratus
ENSSFOG00015004093	tsen54	100	45.775	ENSMICG00000044012	TSEN54	80	46.963	Microcebus_murinus
ENSSFOG00015004093	tsen54	100	43.287	ENSMOCG00000021585	Tsen54	81	43.056	Microtus_ochrogaster
ENSSFOG00015004093	tsen54	99	47.765	ENSMMOG00000020189	tsen54	81	49.057	Mola_mola
ENSSFOG00015004093	tsen54	100	44.419	ENSMODG00000007438	TSEN54	80	44.191	Monodelphis_domestica
ENSSFOG00015004093	tsen54	99	56.674	ENSMALG00000020573	tsen54	81	56.909	Monopterus_albus
ENSSFOG00015004093	tsen54	100	43.056	MGP_CAROLIEiJ_G0017417	Tsen54	81	42.824	Mus_caroli
ENSSFOG00015004093	tsen54	100	42.725	ENSMUSG00000020781	Tsen54	81	42.494	Mus_musculus
ENSSFOG00015004093	tsen54	100	43.678	MGP_PahariEiJ_G0018547	Tsen54	81	43.448	Mus_pahari
ENSSFOG00015004093	tsen54	100	42.857	MGP_SPRETEiJ_G0018262	Tsen54	81	42.627	Mus_spretus
ENSSFOG00015004093	tsen54	100	43.280	ENSMPUG00000013870	TSEN54	81	43.964	Mustela_putorius_furo
ENSSFOG00015004093	tsen54	100	44.444	ENSMLUG00000015298	TSEN54	81	44.418	Myotis_lucifugus
ENSSFOG00015004093	tsen54	100	43.823	ENSNGAG00000015673	Tsen54	81	43.590	Nannospalax_galili
ENSSFOG00015004093	tsen54	100	40.741	ENSMEUG00000011908	TSEN54	91	40.509	Notamacropus_eugenii
ENSSFOG00015004093	tsen54	100	41.452	ENSOPRG00000012513	TSEN54	80	40.920	Ochotona_princeps
ENSSFOG00015004093	tsen54	99	54.042	ENSONIG00000009543	tsen54	80	53.704	Oreochromis_niloticus
ENSSFOG00015004093	tsen54	100	42.523	ENSOCUG00000009875	TSEN54	79	42.991	Oryctolagus_cuniculus
ENSSFOG00015004093	tsen54	99	52.706	ENSORLG00000000852	tsen54	80	52.358	Oryzias_latipes
ENSSFOG00015004093	tsen54	99	52.719	ENSORLG00020018221	tsen54	89	52.257	Oryzias_latipes_hni
ENSSFOG00015004093	tsen54	99	51.313	ENSORLG00015009413	tsen54	66	67.961	Oryzias_latipes_hsok
ENSSFOG00015004093	tsen54	99	55.024	ENSOMEG00000014402	tsen54	77	54.785	Oryzias_melastigma
ENSSFOG00015004093	tsen54	100	42.991	ENSOGAG00000001442	TSEN54	81	42.757	Otolemur_garnettii
ENSSFOG00015004093	tsen54	100	44.931	ENSOARG00000010361	TSEN54	94	45.012	Ovis_aries
ENSSFOG00015004093	tsen54	100	44.828	ENSPPAG00000043519	TSEN54	85	45.977	Pan_paniscus
ENSSFOG00015004093	tsen54	100	43.287	ENSPPRG00000009162	TSEN54	81	43.088	Panthera_pardus
ENSSFOG00015004093	tsen54	100	43.662	ENSPTIG00000019312	TSEN54	90	43.897	Panthera_tigris_altaica
ENSSFOG00015004093	tsen54	100	44.368	ENSPTRG00000009646	TSEN54	81	45.517	Pan_troglodytes
ENSSFOG00015004093	tsen54	100	44.954	ENSPANG00000020133	TSEN54	80	45.622	Papio_anubis
ENSSFOG00015004093	tsen54	100	66.983	ENSPKIG00000023018	tsen54	100	68.409	Paramormyrops_kingsleyae
ENSSFOG00015004093	tsen54	99	46.729	ENSPSIG00000012807	TSEN54	99	46.495	Pelodiscus_sinensis
ENSSFOG00015004093	tsen54	99	38.283	ENSPMGG00000019578	tsen54	84	38.967	Periophthalmus_magnuspinnatus
ENSSFOG00015004093	tsen54	100	43.590	ENSPEMG00000014857	Tsen54	81	43.357	Peromyscus_maniculatus_bairdii
ENSSFOG00015004093	tsen54	99	54.374	ENSPFOG00000022740	tsen54	80	54.610	Poecilia_formosa
ENSSFOG00015004093	tsen54	99	53.571	ENSPLAG00000014847	tsen54	80	53.810	Poecilia_latipinna
ENSSFOG00015004093	tsen54	99	53.810	ENSPMEG00000022876	tsen54	80	54.048	Poecilia_mexicana
ENSSFOG00015004093	tsen54	99	54.306	ENSPREG00000013090	tsen54	80	54.545	Poecilia_reticulata
ENSSFOG00015004093	tsen54	100	44.836	ENSPPYG00000008629	TSEN54	88	45.606	Pongo_abelii
ENSSFOG00015004093	tsen54	94	38.741	ENSPCAG00000002093	TSEN54	79	38.741	Procavia_capensis
ENSSFOG00015004093	tsen54	77	70.588	ENSPCOG00000027880	TSEN54	81	46.172	Propithecus_coquereli
ENSSFOG00015004093	tsen54	100	44.521	ENSPVAG00000008446	TSEN54	81	44.292	Pteropus_vampyrus
ENSSFOG00015004093	tsen54	99	54.225	ENSPNYG00000010217	tsen54	99	51.264	Pundamilia_nyererei
ENSSFOG00015004093	tsen54	99	56.635	ENSPNAG00000003770	tsen54	80	56.635	Pygocentrus_nattereri
ENSSFOG00015004093	tsen54	100	42.793	ENSRNOG00000004598	Tsen54	81	42.568	Rattus_norvegicus
ENSSFOG00015004093	tsen54	100	43.875	ENSRBIG00000043040	TSEN54	81	44.598	Rhinopithecus_bieti
ENSSFOG00015004093	tsen54	100	43.875	ENSRROG00000030797	TSEN54	81	45.057	Rhinopithecus_roxellana
ENSSFOG00015004093	tsen54	100	41.244	ENSSBOG00000013543	TSEN54	79	42.494	Saimiri_boliviensis_boliviensis
ENSSFOG00015004093	tsen54	100	43.311	ENSSHAG00000018127	TSEN54	80	43.311	Sarcophilus_harrisii
ENSSFOG00015004093	tsen54	99	53.162	ENSSMAG00000012449	tsen54	96	53.162	Scophthalmus_maximus
ENSSFOG00015004093	tsen54	99	57.710	ENSSDUG00000021506	tsen54	81	57.710	Seriola_dumerili
ENSSFOG00015004093	tsen54	99	57.710	ENSSLDG00000016303	tsen54	81	57.710	Seriola_lalandi_dorsalis
ENSSFOG00015004093	tsen54	79	42.566	ENSSPUG00000008988	TSEN54	77	42.566	Sphenodon_punctatus
ENSSFOG00015004093	tsen54	99	55.556	ENSSPAG00000008098	-	99	52.246	Stegastes_partitus
ENSSFOG00015004093	tsen54	99	52.246	ENSSPAG00000008047	tsen54	99	52.246	Stegastes_partitus
ENSSFOG00015004093	tsen54	100	45.370	ENSSSCG00000036852	TSEN54	90	45.139	Sus_scrofa
ENSSFOG00015004093	tsen54	100	45.199	ENSTGUG00000008548	TSEN54	94	44.965	Taeniopygia_guttata
ENSSFOG00015004093	tsen54	99	52.246	ENSTRUG00000004230	tsen54	79	52.246	Takifugu_rubripes
ENSSFOG00015004093	tsen54	99	52.246	ENSTNIG00000011281	tsen54	81	52.844	Tetraodon_nigroviridis
ENSSFOG00015004093	tsen54	100	44.138	ENSTTRG00000015828	TSEN54	94	43.908	Tursiops_truncatus
ENSSFOG00015004093	tsen54	100	44.647	ENSUAMG00000010045	TSEN54	100	44.647	Ursus_americanus
ENSSFOG00015004093	tsen54	100	41.907	ENSUMAG00000008979	TSEN54	100	44.419	Ursus_maritimus
ENSSFOG00015004093	tsen54	100	44.470	ENSVVUG00000011411	TSEN54	82	45.287	Vulpes_vulpes
ENSSFOG00015004093	tsen54	99	44.213	ENSXETG00000012532	tsen54	63	65.714	Xenopus_tropicalis
ENSSFOG00015004093	tsen54	99	51.185	ENSXCOG00000018245	tsen54	99	51.422	Xiphophorus_couchianus
ENSSFOG00015004093	tsen54	99	54.524	ENSXMAG00000018818	tsen54	80	54.762	Xiphophorus_maculatus