EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015004139 (Gene tree)
Gene ID: 108927503
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 11133 bases
Position: chrKV410871.1:524348-535480
Accession: 108927503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006362	TRM	PF02005.16	1.2e-140	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015006462	-	2120	XM_018740855	ENSSFOP00015006362	673 (aa)	XP_018596371	A0A1W4Z6Q0

Gene Model

Click here to download ENSSFOG00015004139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004139	trmt1	84	68.293	ENSG00000104907	TRMT1	99	72.251	Homo_sapiens
ENSSFOG00015004139	trmt1	85	67.185	ENSAMEG00000012598	TRMT1	86	67.069	Ailuropoda_melanoleuca
ENSSFOG00015004139	trmt1	89	70.559	ENSACIG00000018680	trmt1	91	72.089	Amphilophus_citrinellus
ENSSFOG00015004139	trmt1	90	76.214	ENSAOCG00000006781	trmt1	89	77.946	Amphiprion_ocellaris
ENSSFOG00015004139	trmt1	90	76.214	ENSAPEG00000007712	trmt1	89	77.946	Amphiprion_percula
ENSSFOG00015004139	trmt1	95	73.602	ENSATEG00000001872	trmt1	94	73.333	Anabas_testudineus
ENSSFOG00015004139	trmt1	85	67.014	ENSACAG00000003825	TRMT1	93	67.014	Anolis_carolinensis
ENSSFOG00015004139	trmt1	84	66.492	ENSANAG00000023016	TRMT1	92	66.492	Aotus_nancymaae
ENSSFOG00015004139	trmt1	90	74.267	ENSACLG00000010073	trmt1	97	75.589	Astatotilapia_calliptera
ENSSFOG00015004139	trmt1	86	78.253	ENSAMXG00000012026	trmt1	89	77.496	Astyanax_mexicanus
ENSSFOG00015004139	trmt1	88	66.057	ENSBTAG00000019325	TRMT1	85	66.057	Bos_taurus
ENSSFOG00015004139	trmt1	76	41.426	WBGene00006613	trm-1	93	41.506	Caenorhabditis_elegans
ENSSFOG00015004139	trmt1	84	65.739	ENSCJAG00000004566	TRMT1	88	65.739	Callithrix_jacchus
ENSSFOG00015004139	trmt1	89	66.007	ENSCAFG00000017070	TRMT1	91	67.647	Canis_familiaris
ENSSFOG00015004139	trmt1	89	65.620	ENSCAFG00020005397	TRMT1	89	67.130	Canis_lupus_dingo
ENSSFOG00015004139	trmt1	85	67.298	ENSCHIG00000013569	TRMT1	88	67.298	Capra_hircus
ENSSFOG00015004139	trmt1	84	64.623	ENSTSYG00000003207	TRMT1	87	64.623	Carlito_syrichta
ENSSFOG00015004139	trmt1	78	63.516	ENSCAPG00000003355	TRMT1	94	63.516	Cavia_aperea
ENSSFOG00015004139	trmt1	90	62.075	ENSCPOG00000011754	TRMT1	87	65.149	Cavia_porcellus
ENSSFOG00015004139	trmt1	84	65.271	ENSCCAG00000022263	TRMT1	92	65.271	Cebus_capucinus
ENSSFOG00015004139	trmt1	68	56.957	ENSCATG00000038220	-	91	56.957	Cercocebus_atys
ENSSFOG00015004139	trmt1	84	68.412	ENSCATG00000039850	TRMT1	87	68.412	Cercocebus_atys
ENSSFOG00015004139	trmt1	86	65.932	ENSCLAG00000015295	TRMT1	92	64.068	Chinchilla_lanigera
ENSSFOG00015004139	trmt1	70	70.675	ENSCSAG00000006500	TRMT1	89	70.675	Chlorocebus_sabaeus
ENSSFOG00015004139	trmt1	84	68.947	ENSCPBG00000023866	TRMT1	86	69.123	Chrysemys_picta_bellii
ENSSFOG00015004139	trmt1	82	47.415	ENSCING00000002884	-	99	47.415	Ciona_intestinalis
ENSSFOG00015004139	trmt1	79	49.907	ENSCSAVG00000010927	-	100	48.885	Ciona_savignyi
ENSSFOG00015004139	trmt1	84	54.530	ENSCANG00000040631	TRMT1	87	54.530	Colobus_angolensis_palliatus
ENSSFOG00015004139	trmt1	81	53.791	ENSCANG00000031650	-	87	53.791	Colobus_angolensis_palliatus
ENSSFOG00015004139	trmt1	83	66.608	ENSCGRG00001022594	Trmt1	87	67.075	Cricetulus_griseus_chok1gshd
ENSSFOG00015004139	trmt1	83	66.608	ENSCGRG00000017732	Trmt1	86	67.075	Cricetulus_griseus_crigri
ENSSFOG00015004139	trmt1	90	75.369	ENSCSEG00000001643	trmt1	85	81.907	Cynoglossus_semilaevis
ENSSFOG00015004139	trmt1	94	74.528	ENSCVAG00000011886	trmt1	89	78.194	Cyprinodon_variegatus
ENSSFOG00015004139	trmt1	85	75.685	ENSDARG00000010978	trmt1	87	76.329	Danio_rerio
ENSSFOG00015004139	trmt1	77	44.898	ENSDNOG00000048240	-	91	44.898	Dasypus_novemcinctus
ENSSFOG00015004139	trmt1	84	65.794	ENSDORG00000014298	Trmt1	87	65.794	Dipodomys_ordii
ENSSFOG00015004139	trmt1	76	49.711	FBgn0032430	CG6388	87	49.711	Drosophila_melanogaster
ENSSFOG00015004139	trmt1	77	51.744	ENSEBUG00000003449	trmt1	76	51.731	Eptatretus_burgeri
ENSSFOG00015004139	trmt1	85	66.552	ENSEASG00005004050	TRMT1	91	66.552	Equus_asinus_asinus
ENSSFOG00015004139	trmt1	85	66.724	ENSECAG00000016149	TRMT1	91	66.724	Equus_caballus
ENSSFOG00015004139	trmt1	58	56.061	ENSEEUG00000014102	-	100	56.061	Erinaceus_europaeus
ENSSFOG00015004139	trmt1	93	70.253	ENSELUG00000021659	trmt1	95	70.253	Esox_lucius
ENSSFOG00015004139	trmt1	85	67.470	ENSFCAG00000000483	TRMT1	88	67.470	Felis_catus
ENSSFOG00015004139	trmt1	84	66.900	ENSFDAG00000007386	TRMT1	87	66.900	Fukomys_damarensis
ENSSFOG00015004139	trmt1	91	73.813	ENSFHEG00000012865	trmt1	89	80.451	Fundulus_heteroclitus
ENSSFOG00015004139	trmt1	85	70.035	ENSGMOG00000006564	trmt1	100	70.035	Gadus_morhua
ENSSFOG00015004139	trmt1	85	79.896	ENSGAFG00000011862	trmt1	90	79.896	Gambusia_affinis
ENSSFOG00015004139	trmt1	84	74.781	ENSGACG00000000227	trmt1	92	75.131	Gasterosteus_aculeatus
ENSSFOG00015004139	trmt1	84	69.489	ENSGAGG00000016432	TRMT1	85	69.489	Gopherus_agassizii
ENSSFOG00015004139	trmt1	84	68.293	ENSGGOG00000014007	TRMT1	87	68.293	Gorilla_gorilla
ENSSFOG00015004139	trmt1	81	69.873	ENSHBUG00000008821	trmt1	92	69.873	Haplochromis_burtoni
ENSSFOG00015004139	trmt1	86	65.144	ENSHGLG00000015972	TRMT1	90	65.144	Heterocephalus_glaber_female
ENSSFOG00015004139	trmt1	86	60.575	ENSHGLG00100018112	TRMT1	90	60.575	Heterocephalus_glaber_male
ENSSFOG00015004139	trmt1	84	74.296	ENSHCOG00000009447	trmt1	89	74.296	Hippocampus_comes
ENSSFOG00015004139	trmt1	99	66.912	ENSIPUG00000002899	trmt1	87	74.199	Ictalurus_punctatus
ENSSFOG00015004139	trmt1	85	67.126	ENSSTOG00000012531	TRMT1	89	67.126	Ictidomys_tridecemlineatus
ENSSFOG00015004139	trmt1	87	64.874	ENSJJAG00000017154	Trmt1	88	66.492	Jaculus_jaculus
ENSSFOG00015004139	trmt1	90	77.049	ENSKMAG00000011809	trmt1	98	77.397	Kryptolebias_marmoratus
ENSSFOG00015004139	trmt1	89	76.000	ENSLBEG00000012703	trmt1	99	70.299	Labrus_bergylta
ENSSFOG00015004139	trmt1	84	60.453	ENSLACG00000014585	TRMT1	96	59.727	Latimeria_chalumnae
ENSSFOG00015004139	trmt1	85	72.935	ENSLOCG00000006479	trmt1	99	72.935	Lepisosteus_oculatus
ENSSFOG00015004139	trmt1	90	64.344	ENSLAFG00000014072	TRMT1	88	67.361	Loxodonta_africana
ENSSFOG00015004139	trmt1	84	68.412	ENSMFAG00000033143	TRMT1	87	68.412	Macaca_fascicularis
ENSSFOG00015004139	trmt1	84	64.111	ENSMMUG00000001167	TRMT1	87	64.111	Macaca_mulatta
ENSSFOG00015004139	trmt1	84	68.237	ENSMNEG00000037867	TRMT1	87	68.237	Macaca_nemestrina
ENSSFOG00015004139	trmt1	84	68.237	ENSMLEG00000016142	TRMT1	87	68.237	Mandrillus_leucophaeus
ENSSFOG00015004139	trmt1	95	73.725	ENSMAMG00000004357	trmt1	96	73.488	Mastacembelus_armatus
ENSSFOG00015004139	trmt1	90	74.430	ENSMZEG00005014510	trmt1	88	76.581	Maylandia_zebra
ENSSFOG00015004139	trmt1	87	65.217	ENSMAUG00000011134	Trmt1	87	67.130	Mesocricetus_auratus
ENSSFOG00015004139	trmt1	84	68.761	ENSMICG00000000793	TRMT1	87	68.761	Microcebus_murinus
ENSSFOG00015004139	trmt1	84	66.900	ENSMOCG00000015895	Trmt1	87	66.900	Microtus_ochrogaster
ENSSFOG00015004139	trmt1	89	74.457	ENSMMOG00000011097	trmt1	94	76.430	Mola_mola
ENSSFOG00015004139	trmt1	84	69.002	ENSMODG00000011619	TRMT1	93	69.002	Monodelphis_domestica
ENSSFOG00015004139	trmt1	83	68.014	MGP_CAROLIEiJ_G0031304	Trmt1	87	67.895	Mus_caroli
ENSSFOG00015004139	trmt1	83	68.126	ENSMUSG00000001909	Trmt1	87	68.126	Mus_musculus
ENSSFOG00015004139	trmt1	83	67.663	MGP_SPRETEiJ_G0032422	Trmt1	87	67.663	Mus_spretus
ENSSFOG00015004139	trmt1	85	67.703	ENSMPUG00000004210	TRMT1	83	67.703	Mustela_putorius_furo
ENSSFOG00015004139	trmt1	88	66.225	ENSMLUG00000012809	TRMT1	86	68.522	Myotis_lucifugus
ENSSFOG00015004139	trmt1	88	65.174	ENSNGAG00000022486	Trmt1	89	65.268	Nannospalax_galili
ENSSFOG00015004139	trmt1	74	80.368	ENSNBRG00000024376	trmt1	86	80.368	Neolamprologus_brichardi
ENSSFOG00015004139	trmt1	66	67.235	ENSNLEG00000013019	-	84	67.235	Nomascus_leucogenys
ENSSFOG00015004139	trmt1	84	67.368	ENSMEUG00000013756	TRMT1	97	67.368	Notamacropus_eugenii
ENSSFOG00015004139	trmt1	69	76.000	ENSOPRG00000009471	-	73	76.000	Ochotona_princeps
ENSSFOG00015004139	trmt1	86	65.821	ENSODEG00000010323	TRMT1	89	65.821	Octodon_degus
ENSSFOG00015004139	trmt1	99	71.833	ENSONIG00000000400	trmt1	91	81.239	Oreochromis_niloticus
ENSSFOG00015004139	trmt1	70	70.947	ENSOCUG00000021934	TRMT1	90	70.947	Oryctolagus_cuniculus
ENSSFOG00015004139	trmt1	90	69.530	ENSORLG00000020074	trmt1	93	71.980	Oryzias_latipes
ENSSFOG00015004139	trmt1	89	74.338	ENSORLG00020007561	trmt1	93	75.468	Oryzias_latipes_hni
ENSSFOG00015004139	trmt1	89	74.503	ENSORLG00015006547	trmt1	89	76.541	Oryzias_latipes_hsok
ENSSFOG00015004139	trmt1	89	75.662	ENSOMEG00000019343	trmt1	88	78.125	Oryzias_melastigma
ENSSFOG00015004139	trmt1	84	67.652	ENSOGAG00000025576	TRMT1	90	67.652	Otolemur_garnettii
ENSSFOG00015004139	trmt1	85	54.872	ENSOARG00000009397	TRMT1	82	54.545	Ovis_aries
ENSSFOG00015004139	trmt1	85	60.172	ENSPPRG00000012117	TRMT1	89	60.653	Panthera_pardus
ENSSFOG00015004139	trmt1	64	67.483	ENSPTIG00000008833	TRMT1	84	67.483	Panthera_tigris_altaica
ENSSFOG00015004139	trmt1	84	68.293	ENSPTRG00000010557	TRMT1	87	68.293	Pan_troglodytes
ENSSFOG00015004139	trmt1	82	50.611	ENSPTRG00000050421	-	90	50.611	Pan_troglodytes
ENSSFOG00015004139	trmt1	84	68.412	ENSPANG00000009247	TRMT1	87	68.412	Papio_anubis
ENSSFOG00015004139	trmt1	65	57.174	ENSPANG00000034058	-	78	57.174	Papio_anubis
ENSSFOG00015004139	trmt1	100	77.151	ENSPKIG00000005309	trmt1	100	76.855	Paramormyrops_kingsleyae
ENSSFOG00015004139	trmt1	87	55.294	ENSPSIG00000008762	TRMT1	80	57.603	Pelodiscus_sinensis
ENSSFOG00015004139	trmt1	89	74.916	ENSPMGG00000019764	trmt1	91	77.504	Periophthalmus_magnuspinnatus
ENSSFOG00015004139	trmt1	84	67.190	ENSPEMG00000016247	Trmt1	86	67.190	Peromyscus_maniculatus_bairdii
ENSSFOG00015004139	trmt1	90	59.076	ENSPMAG00000004329	trmt1	91	61.579	Petromyzon_marinus
ENSSFOG00015004139	trmt1	84	69.002	ENSPCIG00000019273	TRMT1	89	69.002	Phascolarctos_cinereus
ENSSFOG00015004139	trmt1	85	79.412	ENSPFOG00000008527	trmt1	90	79.412	Poecilia_formosa
ENSSFOG00015004139	trmt1	85	79.029	ENSPLAG00000018788	trmt1	89	81.958	Poecilia_latipinna
ENSSFOG00015004139	trmt1	85	79.239	ENSPMEG00000013120	trmt1	90	79.239	Poecilia_mexicana
ENSSFOG00015004139	trmt1	85	77.913	ENSPREG00000000211	trmt1	86	77.913	Poecilia_reticulata
ENSSFOG00015004139	trmt1	84	68.118	ENSPPYG00000009622	TRMT1	87	68.118	Pongo_abelii
ENSSFOG00015004139	trmt1	84	61.955	ENSPCAG00000003698	TRMT1	88	61.955	Procavia_capensis
ENSSFOG00015004139	trmt1	84	67.888	ENSPCOG00000008653	TRMT1	87	67.888	Propithecus_coquereli
ENSSFOG00015004139	trmt1	88	65.781	ENSPVAG00000015076	TRMT1	88	67.241	Pteropus_vampyrus
ENSSFOG00015004139	trmt1	89	72.305	ENSPNYG00000013960	trmt1	97	73.064	Pundamilia_nyererei
ENSSFOG00015004139	trmt1	95	65.319	ENSPNAG00000024859	trmt1	92	69.426	Pygocentrus_nattereri
ENSSFOG00015004139	trmt1	83	66.899	ENSRNOG00000002914	Trmt1	89	66.899	Rattus_norvegicus
ENSSFOG00015004139	trmt1	84	68.586	ENSRBIG00000038324	TRMT1	87	68.586	Rhinopithecus_bieti
ENSSFOG00015004139	trmt1	81	51.799	ENSRBIG00000037505	-	87	51.799	Rhinopithecus_bieti
ENSSFOG00015004139	trmt1	84	68.586	ENSRROG00000028599	TRMT1	87	68.586	Rhinopithecus_roxellana
ENSSFOG00015004139	trmt1	81	51.079	ENSRROG00000031847	-	86	51.079	Rhinopithecus_roxellana
ENSSFOG00015004139	trmt1	75	39.252	YDR120C	-	92	39.252	Saccharomyces_cerevisiae
ENSSFOG00015004139	trmt1	84	65.505	ENSSBOG00000028861	TRMT1	92	65.505	Saimiri_boliviensis_boliviensis
ENSSFOG00015004139	trmt1	84	69.527	ENSSHAG00000014381	TRMT1	94	68.977	Sarcophilus_harrisii
ENSSFOG00015004139	trmt1	85	79.758	ENSSMAG00000021136	trmt1	96	72.894	Scophthalmus_maximus
ENSSFOG00015004139	trmt1	99	71.429	ENSSDUG00000012740	trmt1	97	72.156	Seriola_dumerili
ENSSFOG00015004139	trmt1	99	71.025	ENSSLDG00000005971	trmt1	97	71.749	Seriola_lalandi_dorsalis
ENSSFOG00015004139	trmt1	76	66.796	ENSSARG00000005138	TRMT1	91	66.796	Sorex_araneus
ENSSFOG00015004139	trmt1	88	51.809	ENSSPUG00000001084	TRMT1	93	53.242	Sphenodon_punctatus
ENSSFOG00015004139	trmt1	99	70.074	ENSSPAG00000007153	trmt1	97	77.002	Stegastes_partitus
ENSSFOG00015004139	trmt1	85	67.530	ENSSSCG00000013744	TRMT1	91	67.414	Sus_scrofa
ENSSFOG00015004139	trmt1	83	75.704	ENSTRUG00000010700	trmt1	86	75.704	Takifugu_rubripes
ENSSFOG00015004139	trmt1	84	79.649	ENSTNIG00000018808	trmt1	98	79.649	Tetraodon_nigroviridis
ENSSFOG00015004139	trmt1	84	65.338	ENSTTRG00000006379	TRMT1	88	65.338	Tursiops_truncatus
ENSSFOG00015004139	trmt1	85	67.586	ENSUAMG00000022911	TRMT1	95	64.068	Ursus_americanus
ENSSFOG00015004139	trmt1	85	67.358	ENSUMAG00000006027	TRMT1	91	67.358	Ursus_maritimus
ENSSFOG00015004139	trmt1	89	66.337	ENSVVUG00000024177	TRMT1	87	67.993	Vulpes_vulpes
ENSSFOG00015004139	trmt1	68	69.783	ENSXETG00000033863	TRMT1	92	69.783	Xenopus_tropicalis
ENSSFOG00015004139	trmt1	85	79.723	ENSXCOG00000015733	trmt1	90	79.861	Xiphophorus_couchianus
ENSSFOG00015004139	trmt1	84	79.510	ENSXMAG00000013823	trmt1	99	79.510	Xiphophorus_maculatus