EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015004233 (Gene tree)
Gene ID: 108928704
Gene Symbol: cd3eap
Alias: cd3ap
Full Name: DNA-directed RNA polymerase I subunit RPA34-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 4721 bases
Position: chrKV410892.1:2621825-2626545
Accession: 108928704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006452	RNA_polI_A34	PF08208.11	4.1e-34	1	1
ENSSFOP00015006463	RNA_polI_A34	PF08208.11	4.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015006563	-	3555	XM_018742764	ENSSFOP00015006463	272 (aa)	XP_018598280	A0A1W4ZC09
ENSSFOT00015006552	-	3625	-	ENSSFOP00015006452	272 (aa)	-	A0A1W4ZC09

Gene Model

Click here to download ENSSFOG00015004233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004233's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004233	cd3eap	55	48.718	ENSAPEG00000016153	cd3eap	53	44.149	Amphiprion_percula
ENSSFOG00015004233	cd3eap	79	40.000	ENSAMXG00000043778	cd3eap	58	41.243	Astyanax_mexicanus
ENSSFOG00015004233	cd3eap	52	40.278	ENSCPBG00000014383	-	50	40.278	Chrysemys_picta_bellii
ENSSFOG00015004233	cd3eap	63	45.556	ENSELUG00000012387	cd3eap	51	45.342	Esox_lucius
ENSSFOG00015004233	cd3eap	54	45.806	ENSGACG00000012623	cd3eap	64	45.806	Gasterosteus_aculeatus
ENSSFOG00015004233	cd3eap	53	40.559	ENSGAGG00000016535	-	52	40.559	Gopherus_agassizii
ENSSFOG00015004233	cd3eap	54	38.037	ENSHCOG00000019142	-	54	42.208	Hippocampus_comes
ENSSFOG00015004233	cd3eap	61	40.462	ENSIPUG00000019546	cd3eap	57	40.462	Ictalurus_punctatus
ENSSFOG00015004233	cd3eap	54	40.667	ENSORLG00000001427	-	57	38.636	Oryzias_latipes
ENSSFOG00015004233	cd3eap	55	42.105	ENSORLG00020019155	-	53	41.509	Oryzias_latipes_hni
ENSSFOG00015004233	cd3eap	59	46.341	ENSPFOG00000016410	cd3eap	62	47.500	Poecilia_formosa
ENSSFOG00015004233	cd3eap	63	42.697	ENSPNAG00000005779	cd3eap	50	45.455	Pygocentrus_nattereri