EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015004256 (Gene tree)
Gene ID: 108918773
Gene Symbol: tnpo3 (1 of many)
Alias: IPO12|LGMD1F|MTR10A|TRN-SR|TRN-SR2
Full Name: transportin-3-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 19862 bases
Position: chrKV411256.1:2228834-2248695
Accession: 108918773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006563	Xpo1	PF08389.12	1.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015006667	-	3120	XM_018726295	ENSSFOP00015006563	936 (aa)	XP_018581811	-

Gene Model

Click here to download ENSSFOG00015004256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004256's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015004256	tnpo3	100	85.363	ENSSFOG00015001474	tnpo3	100	85.363

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004256	tnpo3	100	80.983	ENSG00000064419	TNPO3	100	83.101	Homo_sapiens
ENSSFOG00015004256	tnpo3	100	85.577	ENSAPOG00000018347	tnpo3	100	85.577	Acanthochromis_polyacanthus
ENSSFOG00015004256	tnpo3	99	78.031	ENSAMEG00000005135	TNPO3	98	78.031	Ailuropoda_melanoleuca
ENSSFOG00015004256	tnpo3	96	82.981	ENSACIG00000005897	tnpo3	99	82.981	Amphilophus_citrinellus
ENSSFOG00015004256	tnpo3	100	85.470	ENSAOCG00000008264	tnpo3	100	85.470	Amphiprion_ocellaris
ENSSFOG00015004256	tnpo3	96	85.045	ENSAPEG00000024300	tnpo3	100	85.045	Amphiprion_percula
ENSSFOG00015004256	tnpo3	100	84.722	ENSATEG00000003197	tnpo3	100	84.722	Anabas_testudineus
ENSSFOG00015004256	tnpo3	71	79.245	ENSAPLG00000005946	TNPO3	91	79.245	Anas_platyrhynchos
ENSSFOG00015004256	tnpo3	81	82.368	ENSACAG00000013470	TNPO3	95	82.368	Anolis_carolinensis
ENSSFOG00015004256	tnpo3	100	80.983	ENSANAG00000037940	TNPO3	100	80.983	Aotus_nancymaae
ENSSFOG00015004256	tnpo3	100	85.684	ENSACLG00000005561	tnpo3	100	85.684	Astatotilapia_calliptera
ENSSFOG00015004256	tnpo3	100	85.150	ENSAMXG00000016236	tnpo3	100	85.150	Astyanax_mexicanus
ENSSFOG00015004256	tnpo3	100	81.197	ENSBTAG00000004992	TNPO3	100	81.197	Bos_taurus
ENSSFOG00015004256	tnpo3	100	81.090	ENSCJAG00000018085	TNPO3	100	81.090	Callithrix_jacchus
ENSSFOG00015004256	tnpo3	100	80.983	ENSCAFG00000001543	TNPO3	100	80.983	Canis_familiaris
ENSSFOG00015004256	tnpo3	100	80.983	ENSCAFG00020022462	TNPO3	99	80.618	Canis_lupus_dingo
ENSSFOG00015004256	tnpo3	100	81.090	ENSCHIG00000011721	TNPO3	100	81.090	Capra_hircus
ENSSFOG00015004256	tnpo3	100	80.983	ENSTSYG00000002989	TNPO3	100	83.101	Carlito_syrichta
ENSSFOG00015004256	tnpo3	69	86.022	ENSCAPG00000005843	TNPO3	91	86.022	Cavia_aperea
ENSSFOG00015004256	tnpo3	100	80.983	ENSCPOG00000039784	TNPO3	100	80.983	Cavia_porcellus
ENSSFOG00015004256	tnpo3	100	81.090	ENSCCAG00000033826	TNPO3	100	81.090	Cebus_capucinus
ENSSFOG00015004256	tnpo3	100	80.983	ENSCATG00000030018	TNPO3	100	83.101	Cercocebus_atys
ENSSFOG00015004256	tnpo3	100	80.106	ENSCLAG00000016298	TNPO3	100	80.106	Chinchilla_lanigera
ENSSFOG00015004256	tnpo3	100	80.983	ENSCSAG00000009966	TNPO3	100	80.983	Chlorocebus_sabaeus
ENSSFOG00015004256	tnpo3	99	57.884	ENSCHOG00000011547	TNPO3	99	57.884	Choloepus_hoffmanni
ENSSFOG00015004256	tnpo3	93	79.885	ENSCPBG00000017497	TNPO3	100	79.885	Chrysemys_picta_bellii
ENSSFOG00015004256	tnpo3	99	48.013	ENSCING00000005042	-	99	48.013	Ciona_intestinalis
ENSSFOG00015004256	tnpo3	99	46.344	ENSCSAVG00000008623	-	94	55.273	Ciona_savignyi
ENSSFOG00015004256	tnpo3	100	80.983	ENSCANG00000033070	TNPO3	100	83.101	Colobus_angolensis_palliatus
ENSSFOG00015004256	tnpo3	100	80.876	ENSCGRG00001015925	Tnpo3	100	80.876	Cricetulus_griseus_chok1gshd
ENSSFOG00015004256	tnpo3	100	80.876	ENSCGRG00000010379	Tnpo3	100	80.876	Cricetulus_griseus_crigri
ENSSFOG00015004256	tnpo3	100	83.868	ENSCSEG00000005952	tnpo3	100	83.868	Cynoglossus_semilaevis
ENSSFOG00015004256	tnpo3	100	84.188	ENSCVAG00000020285	tnpo3	100	84.188	Cyprinodon_variegatus
ENSSFOG00015004256	tnpo3	100	84.829	ENSDARG00000045680	tnpo3	99	86.062	Danio_rerio
ENSSFOG00015004256	tnpo3	100	80.876	ENSDNOG00000002556	TNPO3	100	80.876	Dasypus_novemcinctus
ENSSFOG00015004256	tnpo3	61	81.347	ENSDORG00000002433	Tnpo3	95	81.347	Dipodomys_ordii
ENSSFOG00015004256	tnpo3	99	41.826	FBgn0031456	Tnpo-SR	99	41.826	Drosophila_melanogaster
ENSSFOG00015004256	tnpo3	95	83.516	ENSETEG00000002101	TNPO3	90	83.516	Echinops_telfairi
ENSSFOG00015004256	tnpo3	99	67.631	ENSEBUG00000016931	tnpo3	99	67.631	Eptatretus_burgeri
ENSSFOG00015004256	tnpo3	100	80.983	ENSEASG00005008677	TNPO3	100	80.983	Equus_asinus_asinus
ENSSFOG00015004256	tnpo3	100	80.983	ENSECAG00000012815	TNPO3	100	80.983	Equus_caballus
ENSSFOG00015004256	tnpo3	99	75.971	ENSEEUG00000005178	TNPO3	98	75.971	Erinaceus_europaeus
ENSSFOG00015004256	tnpo3	99	86.695	ENSELUG00000012153	tnpo3	99	86.695	Esox_lucius
ENSSFOG00015004256	tnpo3	100	80.983	ENSFCAG00000018186	TNPO3	100	83.101	Felis_catus
ENSSFOG00015004256	tnpo3	96	76.374	ENSFALG00000010667	TNPO3	100	76.374	Ficedula_albicollis
ENSSFOG00015004256	tnpo3	100	80.704	ENSFDAG00000019578	TNPO3	100	80.704	Fukomys_damarensis
ENSSFOG00015004256	tnpo3	99	83.923	ENSFHEG00000012859	tnpo3	99	83.923	Fundulus_heteroclitus
ENSSFOG00015004256	tnpo3	100	84.615	ENSGMOG00000007324	tnpo3	100	84.615	Gadus_morhua
ENSSFOG00015004256	tnpo3	60	81.272	ENSGALG00000039420	TNPO3	99	81.272	Gallus_gallus
ENSSFOG00015004256	tnpo3	100	84.722	ENSGACG00000000699	tnpo3	100	84.722	Gasterosteus_aculeatus
ENSSFOG00015004256	tnpo3	93	80.000	ENSGAGG00000006777	TNPO3	100	80.000	Gopherus_agassizii
ENSSFOG00015004256	tnpo3	100	80.983	ENSGGOG00000008339	TNPO3	100	83.101	Gorilla_gorilla
ENSSFOG00015004256	tnpo3	100	85.684	ENSHBUG00000008351	tnpo3	100	85.684	Haplochromis_burtoni
ENSSFOG00015004256	tnpo3	100	81.090	ENSHGLG00000004463	TNPO3	100	81.090	Heterocephalus_glaber_female
ENSSFOG00015004256	tnpo3	100	81.090	ENSHGLG00100005509	TNPO3	100	81.090	Heterocephalus_glaber_male
ENSSFOG00015004256	tnpo3	100	83.120	ENSHCOG00000007221	tnpo3	100	83.120	Hippocampus_comes
ENSSFOG00015004256	tnpo3	100	85.043	ENSIPUG00000014979	TNPO3	99	85.043	Ictalurus_punctatus
ENSSFOG00015004256	tnpo3	100	80.876	ENSSTOG00000004885	TNPO3	100	80.876	Ictidomys_tridecemlineatus
ENSSFOG00015004256	tnpo3	100	75.186	ENSJJAG00000013530	Tnpo3	100	75.186	Jaculus_jaculus
ENSSFOG00015004256	tnpo3	100	84.829	ENSKMAG00000010497	tnpo3	100	84.829	Kryptolebias_marmoratus
ENSSFOG00015004256	tnpo3	96	82.366	ENSLBEG00000016595	tnpo3	100	82.366	Labrus_bergylta
ENSSFOG00015004256	tnpo3	96	80.022	ENSLBEG00000011988	-	99	80.022	Labrus_bergylta
ENSSFOG00015004256	tnpo3	84	86.486	ENSLACG00000002351	TNPO3	99	86.486	Latimeria_chalumnae
ENSSFOG00015004256	tnpo3	100	87.179	ENSLOCG00000015556	tnpo3	100	87.179	Lepisosteus_oculatus
ENSSFOG00015004256	tnpo3	100	80.426	ENSLAFG00000002738	TNPO3	100	80.426	Loxodonta_africana
ENSSFOG00015004256	tnpo3	100	80.983	ENSMFAG00000032385	TNPO3	100	83.101	Macaca_fascicularis
ENSSFOG00015004256	tnpo3	100	80.983	ENSMMUG00000004311	TNPO3	100	83.101	Macaca_mulatta
ENSSFOG00015004256	tnpo3	100	80.983	ENSMNEG00000045277	TNPO3	100	83.101	Macaca_nemestrina
ENSSFOG00015004256	tnpo3	100	80.983	ENSMLEG00000037881	TNPO3	100	83.101	Mandrillus_leucophaeus
ENSSFOG00015004256	tnpo3	100	85.043	ENSMAMG00000021096	tnpo3	100	85.043	Mastacembelus_armatus
ENSSFOG00015004256	tnpo3	100	85.684	ENSMZEG00005015084	tnpo3	100	85.684	Maylandia_zebra
ENSSFOG00015004256	tnpo3	77	78.069	ENSMGAG00000002839	TNPO3	99	78.069	Meleagris_gallopavo
ENSSFOG00015004256	tnpo3	100	80.983	ENSMAUG00000013463	Tnpo3	100	80.983	Mesocricetus_auratus
ENSSFOG00015004256	tnpo3	69	30.769	ENSMICG00000011003	IPO13	79	31.361	Microcebus_murinus
ENSSFOG00015004256	tnpo3	100	80.983	ENSMICG00000000140	TNPO3	100	83.101	Microcebus_murinus
ENSSFOG00015004256	tnpo3	100	80.876	ENSMOCG00000013264	Tnpo3	100	80.876	Microtus_ochrogaster
ENSSFOG00015004256	tnpo3	100	84.402	ENSMMOG00000005887	tnpo3	100	84.402	Mola_mola
ENSSFOG00015004256	tnpo3	100	81.624	ENSMODG00000014700	TNPO3	100	81.624	Monodelphis_domestica
ENSSFOG00015004256	tnpo3	100	85.256	ENSMALG00000006675	tnpo3	100	85.256	Monopterus_albus
ENSSFOG00015004256	tnpo3	100	80.769	MGP_CAROLIEiJ_G0028176	Tnpo3	100	80.769	Mus_caroli
ENSSFOG00015004256	tnpo3	100	80.769	ENSMUSG00000012535	Tnpo3	100	80.769	Mus_musculus
ENSSFOG00015004256	tnpo3	100	80.662	MGP_PahariEiJ_G0021934	Tnpo3	100	80.662	Mus_pahari
ENSSFOG00015004256	tnpo3	100	80.662	MGP_SPRETEiJ_G0029176	Tnpo3	100	80.662	Mus_spretus
ENSSFOG00015004256	tnpo3	100	80.983	ENSMPUG00000006021	TNPO3	100	80.983	Mustela_putorius_furo
ENSSFOG00015004256	tnpo3	100	72.863	ENSMLUG00000000947	TNPO3	100	72.863	Myotis_lucifugus
ENSSFOG00015004256	tnpo3	100	80.876	ENSNGAG00000008722	Tnpo3	100	80.876	Nannospalax_galili
ENSSFOG00015004256	tnpo3	100	84.402	ENSNBRG00000019001	tnpo3	100	86.584	Neolamprologus_brichardi
ENSSFOG00015004256	tnpo3	100	78.041	ENSNLEG00000012491	TNPO3	100	83.101	Nomascus_leucogenys
ENSSFOG00015004256	tnpo3	89	79.675	ENSMEUG00000002445	TNPO3	85	79.675	Notamacropus_eugenii
ENSSFOG00015004256	tnpo3	91	84.239	ENSOPRG00000006163	TNPO3	90	84.239	Ochotona_princeps
ENSSFOG00015004256	tnpo3	96	82.040	ENSODEG00000012826	TNPO3	100	82.040	Octodon_degus
ENSSFOG00015004256	tnpo3	100	85.470	ENSONIG00000007604	tnpo3	100	85.470	Oreochromis_niloticus
ENSSFOG00015004256	tnpo3	96	77.837	ENSOANG00000011451	TNPO3	100	77.837	Ornithorhynchus_anatinus
ENSSFOG00015004256	tnpo3	99	77.927	ENSOCUG00000010105	TNPO3	99	77.927	Oryctolagus_cuniculus
ENSSFOG00015004256	tnpo3	100	83.974	ENSORLG00000029369	tnpo3	100	83.974	Oryzias_latipes
ENSSFOG00015004256	tnpo3	100	83.974	ENSORLG00020003464	tnpo3	100	83.974	Oryzias_latipes_hni
ENSSFOG00015004256	tnpo3	100	84.081	ENSORLG00015002610	tnpo3	100	84.081	Oryzias_latipes_hsok
ENSSFOG00015004256	tnpo3	100	84.402	ENSOMEG00000021006	tnpo3	100	84.402	Oryzias_melastigma
ENSSFOG00015004256	tnpo3	100	80.983	ENSOGAG00000015340	TNPO3	100	80.983	Otolemur_garnettii
ENSSFOG00015004256	tnpo3	100	80.983	ENSOARG00000004026	TNPO3	100	80.983	Ovis_aries
ENSSFOG00015004256	tnpo3	100	80.983	ENSPPAG00000034975	TNPO3	100	83.101	Pan_paniscus
ENSSFOG00015004256	tnpo3	100	80.983	ENSPPRG00000002050	TNPO3	100	83.101	Panthera_pardus
ENSSFOG00015004256	tnpo3	100	80.983	ENSPTIG00000016167	TNPO3	100	83.101	Panthera_tigris_altaica
ENSSFOG00015004256	tnpo3	100	80.983	ENSPTRG00000019676	TNPO3	100	83.101	Pan_troglodytes
ENSSFOG00015004256	tnpo3	100	78.144	ENSPANG00000022226	TNPO3	100	83.101	Papio_anubis
ENSSFOG00015004256	tnpo3	100	84.295	ENSPKIG00000023234	tnpo3	100	84.295	Paramormyrops_kingsleyae
ENSSFOG00015004256	tnpo3	100	80.937	ENSPKIG00000008628	-	100	80.937	Paramormyrops_kingsleyae
ENSSFOG00015004256	tnpo3	61	79.577	ENSPMGG00000009763	tnpo3	99	79.577	Periophthalmus_magnuspinnatus
ENSSFOG00015004256	tnpo3	100	80.769	ENSPEMG00000000422	Tnpo3	100	80.769	Peromyscus_maniculatus_bairdii
ENSSFOG00015004256	tnpo3	96	69.196	ENSPMAG00000008621	tnpo3	100	69.196	Petromyzon_marinus
ENSSFOG00015004256	tnpo3	100	81.410	ENSPCIG00000011366	TNPO3	100	81.410	Phascolarctos_cinereus
ENSSFOG00015004256	tnpo3	100	83.547	ENSPFOG00000013592	tnpo3	99	83.547	Poecilia_formosa
ENSSFOG00015004256	tnpo3	100	83.547	ENSPLAG00000010188	tnpo3	100	83.547	Poecilia_latipinna
ENSSFOG00015004256	tnpo3	100	83.547	ENSPMEG00000022731	tnpo3	100	83.547	Poecilia_mexicana
ENSSFOG00015004256	tnpo3	100	80.983	ENSPPYG00000017990	TNPO3	100	80.983	Pongo_abelii
ENSSFOG00015004256	tnpo3	99	72.464	ENSPCAG00000010158	TNPO3	98	72.464	Procavia_capensis
ENSSFOG00015004256	tnpo3	87	79.495	ENSPCOG00000023901	TNPO3	96	79.495	Propithecus_coquereli
ENSSFOG00015004256	tnpo3	99	75.648	ENSPVAG00000015757	TNPO3	98	75.648	Pteropus_vampyrus
ENSSFOG00015004256	tnpo3	100	85.684	ENSPNYG00000002349	tnpo3	100	85.684	Pundamilia_nyererei
ENSSFOG00015004256	tnpo3	100	86.004	ENSPNAG00000001142	tnpo3	100	86.004	Pygocentrus_nattereri
ENSSFOG00015004256	tnpo3	100	80.876	ENSRNOG00000021758	Tnpo3	100	80.876	Rattus_norvegicus
ENSSFOG00015004256	tnpo3	100	80.876	ENSRBIG00000042549	TNPO3	100	82.903	Rhinopithecus_bieti
ENSSFOG00015004256	tnpo3	100	80.876	ENSRROG00000039264	TNPO3	100	82.903	Rhinopithecus_roxellana
ENSSFOG00015004256	tnpo3	96	72.590	ENSSBOG00000029642	TNPO3	100	72.590	Saimiri_boliviensis_boliviensis
ENSSFOG00015004256	tnpo3	96	81.473	ENSSHAG00000006837	TNPO3	100	81.473	Sarcophilus_harrisii
ENSSFOG00015004256	tnpo3	100	85.577	ENSSMAG00000010422	tnpo3	97	85.577	Scophthalmus_maximus
ENSSFOG00015004256	tnpo3	100	85.897	ENSSDUG00000004850	tnpo3	100	85.897	Seriola_dumerili
ENSSFOG00015004256	tnpo3	100	85.897	ENSSLDG00000016927	tnpo3	100	85.897	Seriola_lalandi_dorsalis
ENSSFOG00015004256	tnpo3	95	70.174	ENSSARG00000013893	TNPO3	98	70.174	Sorex_araneus
ENSSFOG00015004256	tnpo3	99	76.684	ENSSPUG00000007457	TNPO3	99	76.734	Sphenodon_punctatus
ENSSFOG00015004256	tnpo3	78	86.777	ENSSPAG00000014209	tnpo3	99	86.777	Stegastes_partitus
ENSSFOG00015004256	tnpo3	100	80.983	ENSSSCG00000016572	TNPO3	100	80.983	Sus_scrofa
ENSSFOG00015004256	tnpo3	100	83.174	ENSTNIG00000003347	tnpo3	100	83.174	Tetraodon_nigroviridis
ENSSFOG00015004256	tnpo3	86	81.230	ENSTBEG00000007220	TNPO3	89	81.230	Tupaia_belangeri
ENSSFOG00015004256	tnpo3	99	69.223	ENSTTRG00000014618	TNPO3	98	69.223	Tursiops_truncatus
ENSSFOG00015004256	tnpo3	100	80.983	ENSUAMG00000021281	TNPO3	100	80.983	Ursus_americanus
ENSSFOG00015004256	tnpo3	100	80.983	ENSUMAG00000006882	TNPO3	100	80.983	Ursus_maritimus
ENSSFOG00015004256	tnpo3	85	66.839	ENSVPAG00000006166	TNPO3	88	66.839	Vicugna_pacos
ENSSFOG00015004256	tnpo3	100	80.983	ENSVVUG00000011004	TNPO3	100	80.053	Vulpes_vulpes
ENSSFOG00015004256	tnpo3	99	74.252	ENSXETG00000015009	tnpo3	99	74.252	Xenopus_tropicalis
ENSSFOG00015004256	tnpo3	100	83.226	ENSXMAG00000013062	tnpo3	100	83.226	Xiphophorus_maculatus