EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015004299 (Gene tree)
Gene ID: 108928177
Gene Symbol: GPATCH8
Alias: GPATC8|KIAA0553
Full Name: G patch domain-containing protein 8-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 42594 bases
Position: chrKV410884.1:2877422-2920015
Accession: 108928177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006571	zf-C2H2_jaz	PF12171.8	3.3e-06	1	1
ENSSFOP00015006545	zf-C2H2_jaz	PF12171.8	3.4e-06	1	1
ENSSFOP00015006571	G-patch	PF01585.23	3.7e-12	1	1
ENSSFOP00015006545	G-patch	PF01585.23	3.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015006675	GPATCH8-202	4230	-	ENSSFOP00015006571	1409 (aa)	-	-
ENSSFOT00015006649	GPATCH8-201	4440	XM_018741968	ENSSFOP00015006545	1457 (aa)	XP_018597484	A0A1W4Z0Z6

Gene Model

Click here to download ENSSFOG00015004299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004299's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015004299	GPATCH8	55	60.939	ENSSFOG00015021377	-	55	62.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004299	GPATCH8	51	61.298	ENSAPOG00000023938	gpatch8	56	58.912	Acanthochromis_polyacanthus
ENSSFOG00015004299	GPATCH8	55	55.196	ENSACIG00000012241	gpatch8	56	55.168	Amphilophus_citrinellus
ENSSFOG00015004299	GPATCH8	51	60.973	ENSAOCG00000018102	gpatch8	56	58.960	Amphiprion_ocellaris
ENSSFOG00015004299	GPATCH8	51	60.897	ENSAPEG00000016776	gpatch8	56	58.891	Amphiprion_percula
ENSSFOG00015004299	GPATCH8	56	58.968	ENSATEG00000003247	gpatch8	55	59.501	Anabas_testudineus
ENSSFOG00015004299	GPATCH8	55	57.639	ENSACLG00000004165	gpatch8	56	55.698	Astatotilapia_calliptera
ENSSFOG00015004299	GPATCH8	56	81.931	ENSAMXG00000041683	gpatch8	88	59.964	Astyanax_mexicanus
ENSSFOG00015004299	GPATCH8	55	59.432	ENSTSYG00000033153	GPATCH8	71	58.185	Carlito_syrichta
ENSSFOG00015004299	GPATCH8	100	46.943	ENSCPBG00000008955	GPATCH8	70	53.357	Chrysemys_picta_bellii
ENSSFOG00015004299	GPATCH8	55	57.009	ENSCSEG00000021277	gpatch8	55	54.954	Cynoglossus_semilaevis
ENSSFOG00015004299	GPATCH8	53	52.569	ENSCVAG00000013477	gpatch8	56	55.336	Cyprinodon_variegatus
ENSSFOG00015004299	GPATCH8	94	61.338	ENSDARG00000059768	gpatch8	87	61.710	Danio_rerio
ENSSFOG00015004299	GPATCH8	51	56.501	ENSELUG00000019920	gpatch8	57	56.335	Esox_lucius
ENSSFOG00015004299	GPATCH8	55	57.126	ENSFHEG00000005791	gpatch8	56	57.913	Fundulus_heteroclitus
ENSSFOG00015004299	GPATCH8	55	57.633	ENSGAFG00000018138	gpatch8	56	57.882	Gambusia_affinis
ENSSFOG00015004299	GPATCH8	100	46.300	ENSGAGG00000008358	GPATCH8	70	53.464	Gopherus_agassizii
ENSSFOG00015004299	GPATCH8	55	57.901	ENSHBUG00000002669	gpatch8	56	56.978	Haplochromis_burtoni
ENSSFOG00015004299	GPATCH8	72	59.011	ENSHGLG00100010738	GPATCH8	91	59.011	Heterocephalus_glaber_male
ENSSFOG00015004299	GPATCH8	55	53.191	ENSHCOG00000017518	gpatch8	56	54.481	Hippocampus_comes
ENSSFOG00015004299	GPATCH8	90	55.797	ENSIPUG00000015431	gpatch8	88	56.401	Ictalurus_punctatus
ENSSFOG00015004299	GPATCH8	51	56.195	ENSKMAG00000018364	gpatch8	56	56.023	Kryptolebias_marmoratus
ENSSFOG00015004299	GPATCH8	51	60.799	ENSLBEG00000023352	gpatch8	56	59.181	Labrus_bergylta
ENSSFOG00015004299	GPATCH8	65	77.778	ENSLOCG00000012265	gpatch8	82	77.778	Lepisosteus_oculatus
ENSSFOG00015004299	GPATCH8	55	59.408	ENSMAMG00000001618	gpatch8	54	58.115	Mastacembelus_armatus
ENSSFOG00015004299	GPATCH8	55	57.876	ENSMZEG00005022584	gpatch8	56	55.920	Maylandia_zebra
ENSSFOG00015004299	GPATCH8	53	58.415	ENSMMOG00000020472	gpatch8	53	60.292	Mola_mola
ENSSFOG00015004299	GPATCH8	85	64.794	ENSMALG00000004204	gpatch8	89	64.165	Monopterus_albus
ENSSFOG00015004299	GPATCH8	55	56.800	ENSNBRG00000016402	gpatch8	56	57.324	Neolamprologus_brichardi
ENSSFOG00015004299	GPATCH8	55	58.333	ENSONIG00000001292	gpatch8	55	56.169	Oreochromis_niloticus
ENSSFOG00015004299	GPATCH8	53	57.888	ENSORLG00000028497	gpatch8	54	57.421	Oryzias_latipes
ENSSFOG00015004299	GPATCH8	53	57.473	ENSORLG00020006656	gpatch8	54	57.125	Oryzias_latipes_hni
ENSSFOG00015004299	GPATCH8	53	57.767	ENSORLG00015019797	gpatch8	54	57.421	Oryzias_latipes_hsok
ENSSFOG00015004299	GPATCH8	60	57.912	ENSPKIG00000018753	gpatch8	56	60.414	Paramormyrops_kingsleyae
ENSSFOG00015004299	GPATCH8	89	76.402	ENSPKIG00000004860	GPATCH8	54	65.693	Paramormyrops_kingsleyae
ENSSFOG00015004299	GPATCH8	89	64.205	ENSPFOG00000014833	gpatch8	89	64.205	Poecilia_formosa
ENSSFOG00015004299	GPATCH8	89	64.205	ENSPLAG00000001035	gpatch8	89	64.205	Poecilia_latipinna
ENSSFOG00015004299	GPATCH8	89	64.394	ENSPMEG00000024032	gpatch8	89	64.394	Poecilia_mexicana
ENSSFOG00015004299	GPATCH8	55	56.958	ENSPREG00000008911	gpatch8	56	57.159	Poecilia_reticulata
ENSSFOG00015004299	GPATCH8	55	57.639	ENSPNYG00000009426	gpatch8	56	56.437	Pundamilia_nyererei
ENSSFOG00015004299	GPATCH8	55	56.849	ENSPNAG00000016200	gpatch8	58	57.520	Pygocentrus_nattereri
ENSSFOG00015004299	GPATCH8	50	56.835	ENSSDUG00000018065	gpatch8	53	56.375	Seriola_dumerili
ENSSFOG00015004299	GPATCH8	55	59.930	ENSSLDG00000009225	gpatch8	56	59.444	Seriola_lalandi_dorsalis
ENSSFOG00015004299	GPATCH8	72	51.832	ENSSPUG00000011251	GPATCH8	70	51.625	Sphenodon_punctatus
ENSSFOG00015004299	GPATCH8	51	59.429	ENSSPAG00000011368	gpatch8	56	58.545	Stegastes_partitus
ENSSFOG00015004299	GPATCH8	51	60.253	ENSTRUG00000020474	gpatch8	56	58.099	Takifugu_rubripes
ENSSFOG00015004299	GPATCH8	60	60.137	ENSTBEG00000009486	GPATCH8	55	68.085	Tupaia_belangeri
ENSSFOG00015004299	GPATCH8	55	56.577	ENSXCOG00000016680	gpatch8	56	56.993	Xiphophorus_couchianus
ENSSFOG00015004299	GPATCH8	55	56.425	ENSXMAG00000009217	gpatch8	56	56.192	Xiphophorus_maculatus