EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015004405 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 5111 bases
Position: chrKV411101.1:3401042-3406152
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006719	PRP38	PF03371.15	2e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015006822	-	537	-	ENSSFOP00015006719	178 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015004405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004405's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015004405	-	100	78.421	ENSSFOG00015011251	-	87	82.036

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004405	-	89	79.641	ENSACIG00000016459	-	88	82.781	Amphilophus_citrinellus
ENSSFOG00015004405	-	79	63.946	ENSCSAVG00000009443	-	53	65.035	Ciona_savignyi
ENSSFOG00015004405	-	99	77.717	ENSCVAG00000005543	-	81	83.333	Cyprinodon_variegatus
ENSSFOG00015004405	-	89	59.394	FBgn0030468	CG1622	88	64.516	Drosophila_melanogaster
ENSSFOG00015004405	-	87	80.745	ENSNBRG00000019221	-	89	82.781	Neolamprologus_brichardi
ENSSFOG00015004405	-	94	81.143	ENSORLG00000015621	-	92	84.277	Oryzias_latipes
ENSSFOG00015004405	-	94	81.143	ENSORLG00020016276	-	91	84.277	Oryzias_latipes_hni
ENSSFOG00015004405	-	99	80.435	ENSORLG00015016270	-	82	83.333	Oryzias_latipes_hsok
ENSSFOG00015004405	-	99	80.435	ENSOMEG00000022050	-	91	83.333	Oryzias_melastigma
ENSSFOG00015004405	-	84	82.803	ENSPMGG00000017585	-	93	83.444	Periophthalmus_magnuspinnatus
ENSSFOG00015004405	-	69	75.194	ENSPMAG00000007150	-	81	75.591	Petromyzon_marinus
ENSSFOG00015004405	-	99	78.261	ENSPFOG00000004025	-	89	83.929	Poecilia_formosa
ENSSFOG00015004405	-	99	80.978	ENSPREG00000015599	-	91	83.929	Poecilia_reticulata
ENSSFOG00015004405	-	100	78.495	ENSSMAG00000001781	-	92	81.176	Scophthalmus_maximus
ENSSFOG00015004405	-	100	79.570	ENSSDUG00000016574	-	92	82.353	Seriola_dumerili
ENSSFOG00015004405	-	100	79.570	ENSSLDG00000023487	-	92	82.353	Seriola_lalandi_dorsalis