EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015004431 (Gene tree)
Gene ID: 108924084
Gene Symbol: papola
Alias: papolb|si:ch211-199l3.6|wu:fc43b06|wu:fp01g10|zgc:109706
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 24007 bases
Position: chrKV410831.1:6335039-6359045
Accession: 108924084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006782	PAP_RNA-bind	PF04926.15	3.4e-24	1	1
ENSSFOP00015006796	PAP_RNA-bind	PF04926.15	5.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015006887	-	1659	-	ENSSFOP00015006782	552 (aa)	-	-
ENSSFOT00015006901	-	3537	XM_018735225	ENSSFOP00015006796	726 (aa)	XP_018590741	A0A1W4YR20

Gene Model

Click here to download ENSSFOG00015004431's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004431's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015004431	papola	96	72.089	ENSSFOG00015002383	papolg	98	60.248
ENSSFOG00015004431	papola	96	67.403	ENSSFOG00015011874	papolg	98	55.798

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004431	papola	99	84.991	ENSG00000090060	PAPOLA	94	95.263	Homo_sapiens
ENSSFOG00015004431	papola	99	85.145	ENSAMEG00000014142	PAPOLA	98	71.159	Ailuropoda_melanoleuca
ENSSFOG00015004431	papola	97	86.322	ENSAPLG00000006645	PAPOLA	98	71.467	Anas_platyrhynchos
ENSSFOG00015004431	papola	97	86.059	ENSACAG00000013474	PAPOLA	100	75.831	Anolis_carolinensis
ENSSFOG00015004431	papola	96	81.015	ENSANAG00000027941	-	98	81.086	Aotus_nancymaae
ENSSFOG00015004431	papola	99	84.991	ENSANAG00000018274	PAPOLA	99	86.322	Aotus_nancymaae
ENSSFOG00015004431	papola	94	90.927	ENSAMXG00000018141	papola	99	87.748	Astyanax_mexicanus
ENSSFOG00015004431	papola	99	84.810	ENSBTAG00000004054	PAPOLA	100	71.135	Bos_taurus
ENSSFOG00015004431	papola	98	86.347	ENSCJAG00000006512	PAPOLA	99	86.322	Callithrix_jacchus
ENSSFOG00015004431	papola	99	85.145	ENSCAFG00000017783	PAPOLA	97	71.739	Canis_familiaris
ENSSFOG00015004431	papola	99	85.118	ENSCAFG00020011550	PAPOLA	96	86.965	Canis_lupus_dingo
ENSSFOG00015004431	papola	98	86.162	ENSCHIG00000025004	-	97	77.508	Capra_hircus
ENSSFOG00015004431	papola	99	84.477	ENSTSYG00000012384	PAPOLA	98	70.652	Carlito_syrichta
ENSSFOG00015004431	papola	99	80.108	ENSCPOG00000002648	PAPOLA	100	67.287	Cavia_porcellus
ENSSFOG00015004431	papola	99	84.991	ENSCCAG00000025120	PAPOLA	97	86.592	Cebus_capucinus
ENSSFOG00015004431	papola	99	84.991	ENSCATG00000018815	PAPOLA	99	86.592	Cercocebus_atys
ENSSFOG00015004431	papola	99	84.991	ENSCLAG00000016342	PAPOLA	100	70.959	Chinchilla_lanigera
ENSSFOG00015004431	papola	99	84.991	ENSCSAG00000010516	PAPOLA	100	70.580	Chlorocebus_sabaeus
ENSSFOG00015004431	papola	71	67.273	ENSCHOG00000001115	PAPOLA	72	67.273	Choloepus_hoffmanni
ENSSFOG00015004431	papola	95	87.476	ENSCPBG00000024125	PAPOLA	100	71.410	Chrysemys_picta_bellii
ENSSFOG00015004431	papola	99	78.300	ENSCANG00000000159	PAPOLA	98	66.297	Colobus_angolensis_palliatus
ENSSFOG00015004431	papola	98	79.705	ENSCGRG00001000229	-	93	75.430	Cricetulus_griseus_chok1gshd
ENSSFOG00015004431	papola	99	84.810	ENSCGRG00001022693	-	100	71.448	Cricetulus_griseus_chok1gshd
ENSSFOG00015004431	papola	98	73.247	ENSCGRG00001002732	-	99	61.436	Cricetulus_griseus_chok1gshd
ENSSFOG00015004431	papola	97	72.037	ENSCGRG00000001888	-	96	61.096	Cricetulus_griseus_crigri
ENSSFOG00015004431	papola	99	84.783	ENSCGRG00000003664	-	98	72.011	Cricetulus_griseus_crigri
ENSSFOG00015004431	papola	98	75.277	ENSCGRG00000000257	-	100	61.918	Cricetulus_griseus_crigri
ENSSFOG00015004431	papola	89	53.061	ENSCSEG00000001841	-	86	48.187	Cynoglossus_semilaevis
ENSSFOG00015004431	papola	97	87.918	ENSDARG00000009585	papola	100	72.162	Danio_rerio
ENSSFOG00015004431	papola	53	84.746	ENSDORG00000013415	-	100	61.954	Dipodomys_ordii
ENSSFOG00015004431	papola	99	73.732	ENSETEG00000004889	PAPOLA	98	63.094	Echinops_telfairi
ENSSFOG00015004431	papola	96	88.136	ENSELUG00000018972	papola	100	71.524	Esox_lucius
ENSSFOG00015004431	papola	99	85.172	ENSFCAG00000006784	PAPOLA	100	71.409	Felis_catus
ENSSFOG00015004431	papola	98	85.635	ENSFALG00000002547	PAPOLA	96	69.839	Ficedula_albicollis
ENSSFOG00015004431	papola	99	84.964	ENSFDAG00000010370	PAPOLA	98	71.724	Fukomys_damarensis
ENSSFOG00015004431	papola	63	86.994	ENSGMOG00000010209	papola	100	67.100	Gadus_morhua
ENSSFOG00015004431	papola	98	86.506	ENSGALG00000033099	PAPOLA	100	71.105	Gallus_gallus
ENSSFOG00015004431	papola	87	54.583	ENSGACG00000006142	-	100	54.583	Gasterosteus_aculeatus
ENSSFOG00015004431	papola	95	87.476	ENSGAGG00000020500	PAPOLA	99	75.831	Gopherus_agassizii
ENSSFOG00015004431	papola	99	84.991	ENSGGOG00000006287	PAPOLA	98	80.483	Gorilla_gorilla
ENSSFOG00015004431	papola	100	84.685	ENSHGLG00000007909	-	100	70.999	Heterocephalus_glaber_female
ENSSFOG00015004431	papola	88	82.038	ENSHGLG00000007467	-	79	80.208	Heterocephalus_glaber_female
ENSSFOG00015004431	papola	98	75.735	ENSHGLG00000017457	-	98	63.512	Heterocephalus_glaber_female
ENSSFOG00015004431	papola	100	84.505	ENSHGLG00100017273	PAPOLA	100	70.862	Heterocephalus_glaber_male
ENSSFOG00015004431	papola	99	86.314	ENSIPUG00000005919	papola	100	68.774	Ictalurus_punctatus
ENSSFOG00015004431	papola	99	84.991	ENSSTOG00000011471	PAPOLA	100	71.277	Ictidomys_tridecemlineatus
ENSSFOG00015004431	papola	99	84.964	ENSJJAG00000024340	Papola	98	72.090	Jaculus_jaculus
ENSSFOG00015004431	papola	100	78.636	ENSLACG00000018136	PAPOLA	98	65.287	Latimeria_chalumnae
ENSSFOG00015004431	papola	99	79.783	ENSLOCG00000008632	papola	98	67.524	Lepisosteus_oculatus
ENSSFOG00015004431	papola	100	83.964	ENSLAFG00000000946	PAPOLA	98	71.565	Loxodonta_africana
ENSSFOG00015004431	papola	99	84.991	ENSMFAG00000001792	PAPOLA	99	86.162	Macaca_fascicularis
ENSSFOG00015004431	papola	99	84.991	ENSMMUG00000018610	PAPOLA	100	70.580	Macaca_mulatta
ENSSFOG00015004431	papola	99	84.991	ENSMNEG00000043747	PAPOLA	99	86.111	Macaca_nemestrina
ENSSFOG00015004431	papola	99	84.991	ENSMLEG00000032066	PAPOLA	100	70.732	Mandrillus_leucophaeus
ENSSFOG00015004431	papola	77	88.000	ENSMGAG00000013228	-	100	69.085	Meleagris_gallopavo
ENSSFOG00015004431	papola	99	84.810	ENSMAUG00000017178	Papola	100	71.448	Mesocricetus_auratus
ENSSFOG00015004431	papola	99	84.991	ENSMICG00000010347	PAPOLA	98	86.271	Microcebus_murinus
ENSSFOG00015004431	papola	99	84.629	ENSMOCG00000021670	Papola	100	71.182	Microtus_ochrogaster
ENSSFOG00015004431	papola	99	84.629	ENSMODG00000012887	-	100	71.410	Monodelphis_domestica
ENSSFOG00015004431	papola	99	74.457	ENSMODG00000001969	-	99	62.244	Monodelphis_domestica
ENSSFOG00015004431	papola	99	84.629	MGP_CAROLIEiJ_G0018093	Papola	100	70.862	Mus_caroli
ENSSFOG00015004431	papola	99	84.629	ENSMUSG00000021111	Papola	100	70.862	Mus_musculus
ENSSFOG00015004431	papola	99	84.629	MGP_PahariEiJ_G0029850	Papola	100	70.862	Mus_pahari
ENSSFOG00015004431	papola	99	84.629	MGP_SPRETEiJ_G0018943	Papola	100	70.862	Mus_spretus
ENSSFOG00015004431	papola	99	84.991	ENSMPUG00000003054	PAPOLA	100	71.049	Mustela_putorius_furo
ENSSFOG00015004431	papola	99	84.810	ENSMLUG00000010922	PAPOLA	100	70.464	Myotis_lucifugus
ENSSFOG00015004431	papola	97	85.874	ENSNGAG00000022172	Papola	100	70.557	Nannospalax_galili
ENSSFOG00015004431	papola	99	80.179	ENSNLEG00000000625	PAPOLA	98	68.194	Nomascus_leucogenys
ENSSFOG00015004431	papola	65	56.389	ENSMEUG00000007831	-	54	56.389	Notamacropus_eugenii
ENSSFOG00015004431	papola	97	80.784	ENSOPRG00000007625	PAPOLA	100	67.711	Ochotona_princeps
ENSSFOG00015004431	papola	86	54.507	ENSONIG00000001062	-	97	54.507	Oreochromis_niloticus
ENSSFOG00015004431	papola	99	84.838	ENSOANG00000013812	PAPOLA	97	70.968	Ornithorhynchus_anatinus
ENSSFOG00015004431	papola	100	81.655	ENSOCUG00000011531	PAPOLA	98	69.293	Oryctolagus_cuniculus
ENSSFOG00015004431	papola	99	85.172	ENSOGAG00000004611	PAPOLA	100	70.651	Otolemur_garnettii
ENSSFOG00015004431	papola	99	84.810	ENSOARG00000016579	-	100	71.277	Ovis_aries
ENSSFOG00015004431	papola	99	84.991	ENSPPAG00000030505	PAPOLA	98	83.643	Pan_paniscus
ENSSFOG00015004431	papola	99	85.172	ENSPPRG00000008616	PAPOLA	100	71.409	Panthera_pardus
ENSSFOG00015004431	papola	99	85.145	ENSPTIG00000018852	PAPOLA	98	71.989	Panthera_tigris_altaica
ENSSFOG00015004431	papola	99	84.991	ENSPTRG00000006704	PAPOLA	100	70.732	Pan_troglodytes
ENSSFOG00015004431	papola	99	84.991	ENSPANG00000025582	PAPOLA	98	86.592	Papio_anubis
ENSSFOG00015004431	papola	99	91.376	ENSPKIG00000014471	papola	100	78.890	Paramormyrops_kingsleyae
ENSSFOG00015004431	papola	95	87.476	ENSPSIG00000014157	PAPOLA	87	71.809	Pelodiscus_sinensis
ENSSFOG00015004431	papola	97	85.874	ENSPEMG00000000043	Papola	100	71.182	Peromyscus_maniculatus_bairdii
ENSSFOG00015004431	papola	99	84.629	ENSPCIG00000013234	PAPOLA	98	74.926	Phascolarctos_cinereus
ENSSFOG00015004431	papola	99	82.246	ENSPPYG00000006128	PAPOLA	98	69.096	Pongo_abelii
ENSSFOG00015004431	papola	85	85.593	ENSPCAG00000004199	PAPOLA	100	68.161	Procavia_capensis
ENSSFOG00015004431	papola	100	81.261	ENSPCOG00000022117	PAPOLA	97	82.037	Propithecus_coquereli
ENSSFOG00015004431	papola	99	84.629	ENSPVAG00000013925	PAPOLA	100	70.674	Pteropus_vampyrus
ENSSFOG00015004431	papola	97	90.093	ENSPNAG00000010467	papola	100	75.446	Pygocentrus_nattereri
ENSSFOG00015004431	papola	99	84.629	ENSRNOG00000004827	Papola	100	70.479	Rattus_norvegicus
ENSSFOG00015004431	papola	99	84.268	ENSRBIG00000038490	PAPOLA	99	84.871	Rhinopithecus_bieti
ENSSFOG00015004431	papola	99	84.991	ENSRROG00000025545	PAPOLA	100	70.732	Rhinopithecus_roxellana
ENSSFOG00015004431	papola	99	84.783	ENSSBOG00000024061	PAPOLA	97	86.441	Saimiri_boliviensis_boliviensis
ENSSFOG00015004431	papola	99	84.601	ENSSHAG00000015211	PAPOLA	98	71.506	Sarcophilus_harrisii
ENSSFOG00015004431	papola	90	57.545	ENSSDUG00000018247	-	74	57.545	Seriola_dumerili
ENSSFOG00015004431	papola	95	86.907	ENSSPUG00000005835	PAPOLA	100	70.106	Sphenodon_punctatus
ENSSFOG00015004431	papola	99	85.353	ENSSSCG00000002505	-	100	71.546	Sus_scrofa
ENSSFOG00015004431	papola	97	86.296	ENSTGUG00000012687	PAPOLA	98	71.293	Taeniopygia_guttata
ENSSFOG00015004431	papola	69	81.868	ENSTBEG00000000194	PAPOLA	62	81.868	Tupaia_belangeri
ENSSFOG00015004431	papola	93	79.102	ENSTTRG00000005717	PAPOLA	75	80.321	Tursiops_truncatus
ENSSFOG00015004431	papola	77	88.471	ENSUAMG00000025737	PAPOLA	99	88.471	Ursus_americanus
ENSSFOG00015004431	papola	99	85.299	ENSVPAG00000006464	PAPOLA	98	71.837	Vicugna_pacos
ENSSFOG00015004431	papola	99	85.172	ENSVVUG00000028340	PAPOLA	100	71.409	Vulpes_vulpes
ENSSFOG00015004431	papola	98	85.028	ENSXETG00000013949	papola	100	68.449	Xenopus_tropicalis