EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015004453 (Gene tree)
Gene ID: 108936592
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 10793 bases
Position: chrKV411121.1:9426456-9437248
Accession: 108936592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006736	RRM_1	PF00076.22	6.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015006840	-	2262	XM_018756067	ENSSFOP00015006736	234 (aa)	XP_018611583	A0A0P7V4V6

Gene Model

Click here to download ENSSFOG00015004453's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004453's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015004453	rbm38	100	70.782	ENSSFOG00015020384	-	98	71.429
ENSSFOG00015004453	rbm38	56	80.153	ENSSFOG00015011094	rbm24a	58	80.153
ENSSFOG00015004453	rbm38	50	32.558	ENSSFOG00015021687	-	71	32.558
ENSSFOG00015004453	rbm38	92	52.655	ENSSFOG00015000915	rbm24b	98	50.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004453	rbm38	92	69.545	ENSG00000132819	RBM38	91	89.286	Homo_sapiens
ENSSFOG00015004453	rbm38	100	72.996	ENSAPOG00000009939	-	100	70.968	Acanthochromis_polyacanthus
ENSSFOG00015004453	rbm38	100	62.651	ENSAPOG00000003301	rbm38	98	58.635	Acanthochromis_polyacanthus
ENSSFOG00015004453	rbm38	100	62.400	ENSACIG00000000010	rbm38	98	58.000	Amphilophus_citrinellus
ENSSFOG00015004453	rbm38	100	73.790	ENSACIG00000012502	-	96	90.179	Amphilophus_citrinellus
ENSSFOG00015004453	rbm38	97	73.222	ENSAOCG00000012559	RBM38	99	70.833	Amphiprion_ocellaris
ENSSFOG00015004453	rbm38	100	62.651	ENSAOCG00000013497	-	98	58.635	Amphiprion_ocellaris
ENSSFOG00015004453	rbm38	100	62.651	ENSAPEG00000013137	rbm38	98	58.635	Amphiprion_percula
ENSSFOG00015004453	rbm38	100	72.470	ENSAPEG00000023581	-	100	70.161	Amphiprion_percula
ENSSFOG00015004453	rbm38	100	60.400	ENSATEG00000016366	rbm38	98	56.800	Anabas_testudineus
ENSSFOG00015004453	rbm38	100	73.684	ENSATEG00000016710	-	100	70.968	Anabas_testudineus
ENSSFOG00015004453	rbm38	92	66.960	ENSACAG00000016238	RBM38	95	60.744	Anolis_carolinensis
ENSSFOG00015004453	rbm38	92	70.455	ENSANAG00000031959	RBM38	78	93.617	Aotus_nancymaae
ENSSFOG00015004453	rbm38	100	74.089	ENSACLG00000019514	-	100	71.371	Astatotilapia_calliptera
ENSSFOG00015004453	rbm38	96	61.039	ENSAMXG00000038120	rbm38	96	59.307	Astyanax_mexicanus
ENSSFOG00015004453	rbm38	100	72.727	ENSAMXG00000015601	-	100	69.167	Astyanax_mexicanus
ENSSFOG00015004453	rbm38	92	69.091	ENSBTAG00000008105	RBM38	89	65.909	Bos_taurus
ENSSFOG00015004453	rbm38	59	63.309	WBGene00006321	sup-12	65	77.551	Caenorhabditis_elegans
ENSSFOG00015004453	rbm38	92	69.545	ENSCJAG00000019139	RBM38	78	93.617	Callithrix_jacchus
ENSSFOG00015004453	rbm38	92	70.455	ENSCAFG00020021943	RBM38	89	67.273	Canis_lupus_dingo
ENSSFOG00015004453	rbm38	94	67.100	ENSCHIG00000002609	RBM38	93	64.069	Capra_hircus
ENSSFOG00015004453	rbm38	92	70.000	ENSCPOG00000012781	RBM38	89	66.818	Cavia_porcellus
ENSSFOG00015004453	rbm38	92	69.545	ENSCCAG00000036872	RBM38	78	93.617	Cebus_capucinus
ENSSFOG00015004453	rbm38	92	68.468	ENSCATG00000032133	RBM38	78	93.617	Cercocebus_atys
ENSSFOG00015004453	rbm38	92	69.545	ENSCLAG00000005906	RBM38	92	66.364	Chinchilla_lanigera
ENSSFOG00015004453	rbm38	92	68.468	ENSCSAG00000015503	RBM38	89	65.315	Chlorocebus_sabaeus
ENSSFOG00015004453	rbm38	92	69.369	ENSCPBG00000024059	RBM38	98	65.297	Chrysemys_picta_bellii
ENSSFOG00015004453	rbm38	92	51.364	ENSCANG00000030105	-	78	48.636	Colobus_angolensis_palliatus
ENSSFOG00015004453	rbm38	92	67.727	ENSCGRG00001012928	Rbm38	89	66.364	Cricetulus_griseus_chok1gshd
ENSSFOG00015004453	rbm38	80	60.733	ENSCSEG00000020943	rbm38	63	60.938	Cynoglossus_semilaevis
ENSSFOG00015004453	rbm38	100	70.612	ENSCSEG00000004701	-	100	68.163	Cynoglossus_semilaevis
ENSSFOG00015004453	rbm38	84	63.184	ENSCVAG00000015952	rbm38	98	54.800	Cyprinodon_variegatus
ENSSFOG00015004453	rbm38	100	70.445	ENSCVAG00000005472	-	100	68.273	Cyprinodon_variegatus
ENSSFOG00015004453	rbm38	99	67.364	ENSDARG00000058818	rbm38	100	63.180	Danio_rerio
ENSSFOG00015004453	rbm38	92	68.349	ENSDNOG00000032004	RBM38	98	65.138	Dasypus_novemcinctus
ENSSFOG00015004453	rbm38	92	68.636	ENSECAG00000007700	RBM38	89	65.455	Equus_caballus
ENSSFOG00015004453	rbm38	92	68.326	ENSEEUG00000013489	RBM38	89	66.516	Erinaceus_europaeus
ENSSFOG00015004453	rbm38	91	61.441	ENSELUG00000000585	-	99	59.322	Esox_lucius
ENSSFOG00015004453	rbm38	100	72.112	ENSELUG00000005849	-	100	70.040	Esox_lucius
ENSSFOG00015004453	rbm38	92	70.455	ENSFCAG00000042916	RBM38	78	93.617	Felis_catus
ENSSFOG00015004453	rbm38	73	74.713	ENSFALG00000010805	RBM38	87	71.930	Ficedula_albicollis
ENSSFOG00015004453	rbm38	100	58.800	ENSFHEG00000017748	rbm38	98	58.800	Fundulus_heteroclitus
ENSSFOG00015004453	rbm38	100	72.574	ENSFHEG00000006160	-	100	70.042	Fundulus_heteroclitus
ENSSFOG00015004453	rbm38	79	77.660	ENSGMOG00000016655	-	99	75.936	Gadus_morhua
ENSSFOG00015004453	rbm38	92	67.873	ENSGALG00000026081	RBM38	98	64.091	Gallus_gallus
ENSSFOG00015004453	rbm38	92	71.946	ENSGACG00000009873	-	97	69.369	Gasterosteus_aculeatus
ENSSFOG00015004453	rbm38	94	64.602	ENSGACG00000015224	rbm38	100	61.947	Gasterosteus_aculeatus
ENSSFOG00015004453	rbm38	92	69.369	ENSGAGG00000001187	RBM38	98	65.297	Gopherus_agassizii
ENSSFOG00015004453	rbm38	100	75.104	ENSHBUG00000011778	-	100	72.314	Haplochromis_burtoni
ENSSFOG00015004453	rbm38	100	60.800	ENSHBUG00000012058	rbm38	98	56.800	Haplochromis_burtoni
ENSSFOG00015004453	rbm38	92	67.273	ENSHGLG00000015077	RBM38	89	65.455	Heterocephalus_glaber_female
ENSSFOG00015004453	rbm38	88	79.426	ENSHCOG00000005622	-	59	74.762	Hippocampus_comes
ENSSFOG00015004453	rbm38	87	58.049	ENSHCOG00000019040	rbm38	79	59.314	Hippocampus_comes
ENSSFOG00015004453	rbm38	100	71.074	ENSIPUG00000019349	-	100	66.942	Ictalurus_punctatus
ENSSFOG00015004453	rbm38	92	59.307	ENSKMAG00000012402	rbm38	98	56.957	Kryptolebias_marmoratus
ENSSFOG00015004453	rbm38	100	74.274	ENSLBEG00000016163	RBM38	100	71.074	Labrus_bergylta
ENSSFOG00015004453	rbm38	100	61.600	ENSLBEG00000018878	rbm38	98	57.600	Labrus_bergylta
ENSSFOG00015004453	rbm38	100	75.319	ENSLOCG00000003456	rbm38	100	70.213	Lepisosteus_oculatus
ENSSFOG00015004453	rbm38	92	68.468	ENSMFAG00000043808	RBM38	78	93.617	Macaca_fascicularis
ENSSFOG00015004453	rbm38	92	68.468	ENSMMUG00000031391	RBM38	78	93.617	Macaca_mulatta
ENSSFOG00015004453	rbm38	92	68.468	ENSMNEG00000034683	RBM38	78	93.617	Macaca_nemestrina
ENSSFOG00015004453	rbm38	100	72.358	ENSMAMG00000020499	RBM38	100	70.968	Mastacembelus_armatus
ENSSFOG00015004453	rbm38	100	62.000	ENSMAMG00000024135	rbm38	98	58.400	Mastacembelus_armatus
ENSSFOG00015004453	rbm38	100	75.104	ENSMZEG00005000849	-	100	72.314	Maylandia_zebra
ENSSFOG00015004453	rbm38	100	60.800	ENSMZEG00005026036	rbm38	98	56.800	Maylandia_zebra
ENSSFOG00015004453	rbm38	92	69.545	ENSMAUG00000021211	Rbm38	89	67.873	Mesocricetus_auratus
ENSSFOG00015004453	rbm38	92	69.545	ENSMICG00000038011	RBM38	98	66.364	Microcebus_murinus
ENSSFOG00015004453	rbm38	92	69.091	ENSMOCG00000008715	Rbm38	94	66.234	Microtus_ochrogaster
ENSSFOG00015004453	rbm38	100	73.279	ENSMMOG00000020051	-	100	70.565	Mola_mola
ENSSFOG00015004453	rbm38	100	65.984	ENSMODG00000016458	RBM38	100	61.826	Monodelphis_domestica
ENSSFOG00015004453	rbm38	73	69.412	ENSMALG00000022327	rbm38	66	72.549	Monopterus_albus
ENSSFOG00015004453	rbm38	81	80.208	ENSMALG00000004680	RBM38	81	71.163	Monopterus_albus
ENSSFOG00015004453	rbm38	92	66.818	MGP_CAROLIEiJ_G0024745	Rbm38	94	64.935	Mus_caroli
ENSSFOG00015004453	rbm38	92	66.818	ENSMUSG00000027510	Rbm38	94	64.935	Mus_musculus
ENSSFOG00015004453	rbm38	92	66.818	MGP_PahariEiJ_G0026186	Rbm38	94	64.935	Mus_pahari
ENSSFOG00015004453	rbm38	92	66.818	MGP_SPRETEiJ_G0025665	Rbm38	94	64.935	Mus_spretus
ENSSFOG00015004453	rbm38	76	75.824	ENSMPUG00000006518	RBM38	95	69.948	Mustela_putorius_furo
ENSSFOG00015004453	rbm38	92	69.545	ENSMLUG00000011140	RBM38	98	65.909	Myotis_lucifugus
ENSSFOG00015004453	rbm38	100	61.200	ENSNBRG00000022685	rbm38	98	57.200	Neolamprologus_brichardi
ENSSFOG00015004453	rbm38	100	74.089	ENSNBRG00000022545	-	100	71.371	Neolamprologus_brichardi
ENSSFOG00015004453	rbm38	92	69.545	ENSODEG00000007980	RBM38	89	66.364	Octodon_degus
ENSSFOG00015004453	rbm38	99	61.044	ENSONIG00000017073	rbm38	100	56.627	Oreochromis_niloticus
ENSSFOG00015004453	rbm38	99	73.984	ENSONIG00000020324	-	100	71.255	Oreochromis_niloticus
ENSSFOG00015004453	rbm38	97	65.690	ENSOANG00000009259	RBM38	87	63.136	Ornithorhynchus_anatinus
ENSSFOG00015004453	rbm38	95	57.083	ENSORLG00000012154	rbm38	94	55.417	Oryzias_latipes
ENSSFOG00015004453	rbm38	100	69.880	ENSORLG00000027180	-	100	67.200	Oryzias_latipes
ENSSFOG00015004453	rbm38	100	69.880	ENSORLG00020020751	-	100	67.200	Oryzias_latipes_hni
ENSSFOG00015004453	rbm38	95	60.000	ENSORLG00020017871	rbm38	94	56.667	Oryzias_latipes_hni
ENSSFOG00015004453	rbm38	100	70.565	ENSORLG00015017040	-	100	68.273	Oryzias_latipes_hsok
ENSSFOG00015004453	rbm38	95	60.965	ENSORLG00015012606	rbm38	94	56.250	Oryzias_latipes_hsok
ENSSFOG00015004453	rbm38	95	60.417	ENSOMEG00000006805	rbm38	94	57.083	Oryzias_melastigma
ENSSFOG00015004453	rbm38	100	70.850	ENSOMEG00000023912	-	100	67.742	Oryzias_melastigma
ENSSFOG00015004453	rbm38	92	70.000	ENSOGAG00000029136	RBM38	88	66.818	Otolemur_garnettii
ENSSFOG00015004453	rbm38	92	70.455	ENSPPRG00000009507	RBM38	78	93.617	Panthera_pardus
ENSSFOG00015004453	rbm38	51	87.500	ENSPTRG00000045845	-	66	87.500	Pan_troglodytes
ENSSFOG00015004453	rbm38	82	72.081	ENSPTRG00000013661	RBM38	78	93.617	Pan_troglodytes
ENSSFOG00015004453	rbm38	95	55.895	ENSPANG00000033127	-	92	51.770	Papio_anubis
ENSSFOG00015004453	rbm38	92	68.468	ENSPANG00000020919	-	78	93.617	Papio_anubis
ENSSFOG00015004453	rbm38	100	82.553	ENSPKIG00000018122	-	95	96.396	Paramormyrops_kingsleyae
ENSSFOG00015004453	rbm38	100	71.311	ENSPKIG00000025417	rbm38	100	66.393	Paramormyrops_kingsleyae
ENSSFOG00015004453	rbm38	92	69.369	ENSPSIG00000011649	RBM38	91	64.840	Pelodiscus_sinensis
ENSSFOG00015004453	rbm38	100	68.400	ENSPMGG00000017094	-	100	66.135	Periophthalmus_magnuspinnatus
ENSSFOG00015004453	rbm38	99	59.839	ENSPMGG00000011343	rbm38	95	57.083	Periophthalmus_magnuspinnatus
ENSSFOG00015004453	rbm38	100	65.574	ENSPCIG00000013648	RBM38	100	60.996	Phascolarctos_cinereus
ENSSFOG00015004453	rbm38	100	53.516	ENSPFOG00000011658	rbm38	98	57.143	Poecilia_formosa
ENSSFOG00015004453	rbm38	100	54.688	ENSPLAG00000005218	rbm38	98	57.143	Poecilia_latipinna
ENSSFOG00015004453	rbm38	100	70.281	ENSPLAG00000002500	-	100	67.068	Poecilia_latipinna
ENSSFOG00015004453	rbm38	100	53.906	ENSPMEG00000015770	rbm38	98	56.746	Poecilia_mexicana
ENSSFOG00015004453	rbm38	100	53.906	ENSPREG00000007398	rbm38	98	57.540	Poecilia_reticulata
ENSSFOG00015004453	rbm38	92	69.545	ENSPCOG00000026201	RBM38	77	93.617	Propithecus_coquereli
ENSSFOG00015004453	rbm38	92	44.545	ENSPVAG00000006457	RBM38	89	41.364	Pteropus_vampyrus
ENSSFOG00015004453	rbm38	100	74.089	ENSPNYG00000019727	-	96	91.071	Pundamilia_nyererei
ENSSFOG00015004453	rbm38	100	60.400	ENSPNYG00000021373	rbm38	98	56.400	Pundamilia_nyererei
ENSSFOG00015004453	rbm38	96	69.231	ENSPNAG00000010596	rbm38	96	66.810	Pygocentrus_nattereri
ENSSFOG00015004453	rbm38	100	70.000	ENSPNAG00000015123	-	96	78.030	Pygocentrus_nattereri
ENSSFOG00015004453	rbm38	92	69.091	ENSRNOG00000006420	Rbm38	94	64.935	Rattus_norvegicus
ENSSFOG00015004453	rbm38	92	54.505	ENSRROG00000036388	-	87	51.802	Rhinopithecus_roxellana
ENSSFOG00015004453	rbm38	92	70.455	ENSSBOG00000031053	RBM38	96	89.320	Saimiri_boliviensis_boliviensis
ENSSFOG00015004453	rbm38	100	62.400	ENSSDUG00000022611	rbm38	98	58.000	Seriola_dumerili
ENSSFOG00015004453	rbm38	100	73.279	ENSSDUG00000021082	RBM38	100	70.850	Seriola_dumerili
ENSSFOG00015004453	rbm38	100	63.786	ENSSLDG00000010845	rbm38	99	59.259	Seriola_lalandi_dorsalis
ENSSFOG00015004453	rbm38	100	73.684	ENSSLDG00000011778	RBM38	100	70.968	Seriola_lalandi_dorsalis
ENSSFOG00015004453	rbm38	100	62.000	ENSSPAG00000011113	rbm38	98	58.000	Stegastes_partitus
ENSSFOG00015004453	rbm38	100	72.874	ENSSPAG00000020989	RBM38	100	71.730	Stegastes_partitus
ENSSFOG00015004453	rbm38	92	68.636	ENSSSCG00000007504	RBM38	89	66.364	Sus_scrofa
ENSSFOG00015004453	rbm38	95	61.702	ENSTRUG00000024954	rbm38	94	60.593	Takifugu_rubripes
ENSSFOG00015004453	rbm38	100	70.565	ENSTRUG00000019869	-	100	68.952	Takifugu_rubripes
ENSSFOG00015004453	rbm38	94	74.324	ENSTNIG00000007093	-	99	71.622	Tetraodon_nigroviridis
ENSSFOG00015004453	rbm38	92	70.000	ENSUAMG00000019780	RBM38	89	67.727	Ursus_americanus
ENSSFOG00015004453	rbm38	92	70.455	ENSVVUG00000017246	RBM38	89	67.273	Vulpes_vulpes
ENSSFOG00015004453	rbm38	92	64.706	ENSXETG00000011268	rbm38	97	61.468	Xenopus_tropicalis
ENSSFOG00015004453	rbm38	73	69.101	ENSXCOG00000017324	-	62	82.353	Xiphophorus_couchianus
ENSSFOG00015004453	rbm38	100	55.731	ENSXMAG00000023662	rbm38	98	56.000	Xiphophorus_maculatus