EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015004562 (Gene tree)
Gene ID: 108941653
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: U1 small nuclear ribonucleoprotein 70 kDa-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5031 bases
Position: chrKV411220.1:4306364-4311394
Accession: 108941653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006892	RRM_1	PF00076.22	7.5e-19	1	1
ENSSFOP00015006892	U1snRNP70_N	PF12220.8	8.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015007001	-	2850	XM_018764425	ENSSFOP00015006892	467 (aa)	XP_018619941	A0A1W5B444

Gene Model

Click here to download ENSSFOG00015004562's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004562's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015004562	snrnp70	74	81.894	ENSSFOG00015015840	-	100	71.116

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004562	snrnp70	53	85.830	ENSCJAG00000000193	SNRNP70	99	89.024	Callithrix_jacchus
ENSSFOG00015004562	snrnp70	61	82.517	ENSORLG00000017158	snrnp70	52	92.713	Oryzias_latipes
ENSSFOG00015004562	snrnp70	61	82.867	ENSORLG00015010817	snrnp70	52	93.117	Oryzias_latipes_hsok
ENSSFOG00015004562	snrnp70	99	54.105	ENSXETG00000022919	snrnp70	52	87.045	Xenopus_tropicalis