EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015004575 (Gene tree)
Gene ID: 108938302
Gene Symbol: -
Alias: -
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 148023 bases
Position: chrKV411162.1:2427234-2575256
Accession: 108938302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006966	RRM_1	PF00076.22	7e-11	1	1
ENSSFOP00015006934	RRM_1	PF00076.22	7.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015007074	-	825	XM_018758775	ENSSFOP00015006966	274 (aa)	XP_018614291	-
ENSSFOT00015007043	-	2653	-	ENSSFOP00015006934	271 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015004575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004575's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015004575	-	94	51.273	ENSSFOG00015012304	raly	91	52.033
ENSSFOG00015004575	-	74	52.000	ENSSFOG00015012924	-	97	66.667
ENSSFOG00015004575	-	74	50.442	ENSSFOG00015012015	-	80	52.915
ENSSFOG00015004575	-	96	76.140	ENSSFOG00015009401	-	97	76.140

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004575	-	96	65.734	ENSAPOG00000008744	-	97	65.385	Acanthochromis_polyacanthus
ENSSFOG00015004575	-	96	61.111	ENSACIG00000007143	-	97	61.111	Amphilophus_citrinellus
ENSSFOG00015004575	-	96	66.084	ENSAOCG00000023599	-	97	65.734	Amphiprion_ocellaris
ENSSFOG00015004575	-	96	75.265	ENSAOCG00000001605	-	100	69.178	Amphiprion_ocellaris
ENSSFOG00015004575	-	76	76.000	ENSATEG00000023356	-	92	75.714	Anabas_testudineus
ENSSFOG00015004575	-	96	63.636	ENSATEG00000022219	-	93	62.963	Anabas_testudineus
ENSSFOG00015004575	-	96	75.618	ENSACLG00000006949	-	100	69.178	Astatotilapia_calliptera
ENSSFOG00015004575	-	96	67.018	ENSACLG00000011720	-	97	66.316	Astatotilapia_calliptera
ENSSFOG00015004575	-	96	61.538	ENSAMXG00000032617	-	100	56.271	Astyanax_mexicanus
ENSSFOG00015004575	-	96	80.150	ENSAMXG00000019031	-	97	79.775	Astyanax_mexicanus
ENSSFOG00015004575	-	100	61.786	ENSCSEG00000014237	-	100	61.786	Cynoglossus_semilaevis
ENSSFOG00015004575	-	96	65.035	ENSCVAG00000013624	-	97	65.385	Cyprinodon_variegatus
ENSSFOG00015004575	-	96	73.852	ENSCVAG00000018104	-	100	68.259	Cyprinodon_variegatus
ENSSFOG00015004575	-	57	67.836	ENSDARG00000090292	ralyl	81	69.136	Danio_rerio
ENSSFOG00015004575	-	94	65.836	ENSELUG00000001702	-	92	66.038	Esox_lucius
ENSSFOG00015004575	-	54	62.275	ENSGMOG00000005914	-	100	62.275	Gadus_morhua
ENSSFOG00015004575	-	57	73.988	ENSGACG00000004991	-	92	75.449	Gasterosteus_aculeatus
ENSSFOG00015004575	-	96	66.783	ENSHBUG00000010040	-	97	66.434	Haplochromis_burtoni
ENSSFOG00015004575	-	96	75.265	ENSHBUG00000015412	-	100	69.178	Haplochromis_burtoni
ENSSFOG00015004575	-	96	73.852	ENSIPUG00000000507	ralyl	97	74.912	Ictalurus_punctatus
ENSSFOG00015004575	-	96	62.587	ENSKMAG00000022093	-	100	57.627	Kryptolebias_marmoratus
ENSSFOG00015004575	-	96	74.558	ENSKMAG00000018155	-	100	67.808	Kryptolebias_marmoratus
ENSSFOG00015004575	-	96	75.177	ENSLBEG00000011011	-	100	69.759	Labrus_bergylta
ENSSFOG00015004575	-	97	64.111	ENSLBEG00000012873	-	100	58.644	Labrus_bergylta
ENSSFOG00015004575	-	96	73.310	ENSLOCG00000012787	ralyl	97	72.632	Lepisosteus_oculatus
ENSSFOG00015004575	-	96	64.539	ENSMAMG00000001723	-	95	64.539	Mastacembelus_armatus
ENSSFOG00015004575	-	96	67.018	ENSMZEG00005024447	-	97	66.316	Maylandia_zebra
ENSSFOG00015004575	-	96	73.264	ENSMZEG00005018748	-	93	73.897	Maylandia_zebra
ENSSFOG00015004575	-	96	62.542	ENSMMOG00000020441	-	81	61.837	Mola_mola
ENSSFOG00015004575	-	96	66.434	ENSMALG00000019019	-	78	61.017	Monopterus_albus
ENSSFOG00015004575	-	96	80.150	ENSMALG00000012952	-	100	69.178	Monopterus_albus
ENSSFOG00015004575	-	96	73.356	ENSNBRG00000011376	-	93	73.626	Neolamprologus_brichardi
ENSSFOG00015004575	-	96	62.847	ENSNBRG00000011206	-	97	62.847	Neolamprologus_brichardi
ENSSFOG00015004575	-	100	59.727	ENSORLG00000017934	-	100	59.386	Oryzias_latipes
ENSSFOG00015004575	-	97	74.648	ENSORLG00000012719	-	100	68.493	Oryzias_latipes
ENSSFOG00015004575	-	100	58.703	ENSORLG00020000082	-	100	58.703	Oryzias_latipes_hni
ENSSFOG00015004575	-	96	74.912	ENSORLG00020004438	-	100	68.493	Oryzias_latipes_hni
ENSSFOG00015004575	-	96	74.912	ENSORLG00015004727	-	100	68.493	Oryzias_latipes_hsok
ENSSFOG00015004575	-	100	60.068	ENSORLG00015004280	-	100	59.727	Oryzias_latipes_hsok
ENSSFOG00015004575	-	96	79.401	ENSOMEG00000001170	-	100	72.302	Oryzias_melastigma
ENSSFOG00015004575	-	100	61.017	ENSOMEG00000011821	-	97	65.734	Oryzias_melastigma
ENSSFOG00015004575	-	96	74.648	ENSPKIG00000015926	-	100	69.283	Paramormyrops_kingsleyae
ENSSFOG00015004575	-	96	60.069	ENSPMGG00000009532	-	91	60.517	Periophthalmus_magnuspinnatus
ENSSFOG00015004575	-	79	71.730	ENSPMGG00000014481	-	99	71.308	Periophthalmus_magnuspinnatus
ENSSFOG00015004575	-	96	62.626	ENSPFOG00000006120	-	99	62.626	Poecilia_formosa
ENSSFOG00015004575	-	96	67.037	ENSPLAG00000009877	-	71	66.929	Poecilia_latipinna
ENSSFOG00015004575	-	96	74.476	ENSPLAG00000011323	ralyl	94	74.444	Poecilia_latipinna
ENSSFOG00015004575	-	96	67.037	ENSPMEG00000013624	-	75	66.929	Poecilia_mexicana
ENSSFOG00015004575	-	96	74.476	ENSPMEG00000023847	ralyl	94	74.444	Poecilia_mexicana
ENSSFOG00015004575	-	96	72.887	ENSPREG00000001956	ralyl	94	73.507	Poecilia_reticulata
ENSSFOG00015004575	-	96	65.385	ENSPREG00000013805	-	97	59.477	Poecilia_reticulata
ENSSFOG00015004575	-	96	62.847	ENSPNYG00000008772	-	97	62.847	Pundamilia_nyererei
ENSSFOG00015004575	-	96	73.264	ENSPNYG00000003548	-	93	73.897	Pundamilia_nyererei
ENSSFOG00015004575	-	96	78.947	ENSPNAG00000000498	-	85	80.075	Pygocentrus_nattereri
ENSSFOG00015004575	-	100	57.586	ENSPNAG00000026098	-	100	57.241	Pygocentrus_nattereri
ENSSFOG00015004575	-	96	65.957	ENSSMAG00000015907	-	87	65.789	Scophthalmus_maximus
ENSSFOG00015004575	-	96	73.498	ENSSMAG00000005608	-	100	66.781	Scophthalmus_maximus
ENSSFOG00015004575	-	96	80.150	ENSSDUG00000007587	-	100	72.662	Seriola_dumerili
ENSSFOG00015004575	-	96	65.965	ENSSDUG00000012473	-	97	65.385	Seriola_dumerili
ENSSFOG00015004575	-	96	65.385	ENSSLDG00000011534	-	97	65.035	Seriola_lalandi_dorsalis
ENSSFOG00015004575	-	96	75.000	ENSSLDG00000020603	-	100	68.601	Seriola_lalandi_dorsalis
ENSSFOG00015004575	-	96	65.314	ENSSPAG00000013858	-	93	65.314	Stegastes_partitus
ENSSFOG00015004575	-	81	68.776	ENSTRUG00000003829	-	95	66.071	Takifugu_rubripes
ENSSFOG00015004575	-	96	63.230	ENSTNIG00000005594	-	99	63.230	Tetraodon_nigroviridis
ENSSFOG00015004575	-	96	64.664	ENSXETG00000017729	ralyl	96	66.078	Xenopus_tropicalis
ENSSFOG00015004575	-	99	72.185	ENSXCOG00000015156	-	97	70.588	Xiphophorus_couchianus
ENSSFOG00015004575	-	96	65.385	ENSXMAG00000007614	-	100	59.661	Xiphophorus_maculatus
ENSSFOG00015004575	-	96	79.775	ENSXMAG00000008396	-	91	80.080	Xiphophorus_maculatus