EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015004627 (Gene tree)
Gene ID: 108936398
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 4790 bases
Position: chrKV411121.1:9506228-9511017
Accession: 108936398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015006995	FDF	PF09532.10	4.2e-19	1	1
ENSSFOP00015006995	SM-ATX	PF14438.6	4.9e-08	1	1
ENSSFOP00015006995	LSM14	PF12701.7	1.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015007104	-	2794	XM_018755738	ENSSFOP00015006995	371 (aa)	XP_018611254	A0A1W5A5X2

Gene Model

Click here to download ENSSFOG00015004627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004627's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015004627	lsm14b	92	44.337	ENSSFOG00015019348	lsm14ab	85	44.417
ENSSFOG00015004627	lsm14b	96	47.783	ENSSFOG00015001960	LSM14A	88	48.219

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004627	lsm14b	92	62.259	ENSG00000149657	LSM14B	100	53.770	Homo_sapiens
ENSSFOG00015004627	lsm14b	91	62.644	ENSAPOG00000001780	lsm14b	90	62.248	Acanthochromis_polyacanthus
ENSSFOG00015004627	lsm14b	92	55.112	ENSAMEG00000013430	LSM14B	91	54.177	Ailuropoda_melanoleuca
ENSSFOG00015004627	lsm14b	91	59.184	ENSACIG00000012266	lsm14b	90	60.058	Amphilophus_citrinellus
ENSSFOG00015004627	lsm14b	91	62.248	ENSAOCG00000012380	lsm14b	90	61.671	Amphiprion_ocellaris
ENSSFOG00015004627	lsm14b	100	51.145	ENSAOCG00000006667	LSM14B	91	50.000	Amphiprion_ocellaris
ENSSFOG00015004627	lsm14b	91	59.292	ENSAPEG00000023633	lsm14b	89	59.050	Amphiprion_percula
ENSSFOG00015004627	lsm14b	91	60.756	ENSATEG00000016603	lsm14b	90	60.174	Anabas_testudineus
ENSSFOG00015004627	lsm14b	84	52.419	ENSAPLG00000013203	LSM14B	91	50.820	Anas_platyrhynchos
ENSSFOG00015004627	lsm14b	92	59.290	ENSACAG00000016195	LSM14B	90	58.056	Anolis_carolinensis
ENSSFOG00015004627	lsm14b	92	61.433	ENSANAG00000037915	LSM14B	90	60.224	Aotus_nancymaae
ENSSFOG00015004627	lsm14b	91	61.782	ENSACLG00000019663	lsm14b	90	61.782	Astatotilapia_calliptera
ENSSFOG00015004627	lsm14b	91	68.698	ENSAMXG00000002865	lsm14b	91	69.529	Astyanax_mexicanus
ENSSFOG00015004627	lsm14b	92	54.887	ENSBTAG00000021558	LSM14B	91	54.040	Bos_taurus
ENSSFOG00015004627	lsm14b	92	62.534	ENSCJAG00000014434	LSM14B	90	61.064	Callithrix_jacchus
ENSSFOG00015004627	lsm14b	82	52.210	ENSCAFG00000012518	LSM14B	89	51.124	Canis_familiaris
ENSSFOG00015004627	lsm14b	92	61.944	ENSCAFG00020022150	LSM14B	90	61.064	Canis_lupus_dingo
ENSSFOG00015004627	lsm14b	99	47.044	ENSCHIG00000022681	-	90	46.518	Capra_hircus
ENSSFOG00015004627	lsm14b	92	61.389	ENSCHIG00000010284	-	90	60.504	Capra_hircus
ENSSFOG00015004627	lsm14b	81	57.812	ENSTSYG00000031914	LSM14B	79	56.369	Carlito_syrichta
ENSSFOG00015004627	lsm14b	81	59.502	ENSCAPG00000013059	LSM14B	89	57.778	Cavia_aperea
ENSSFOG00015004627	lsm14b	81	59.688	ENSCPOG00000038080	LSM14B	89	57.962	Cavia_porcellus
ENSSFOG00015004627	lsm14b	92	61.433	ENSCCAG00000021267	LSM14B	90	60.224	Cebus_capucinus
ENSSFOG00015004627	lsm14b	92	44.669	ENSCCAG00000024900	-	75	44.011	Cebus_capucinus
ENSSFOG00015004627	lsm14b	92	61.983	ENSCATG00000036006	LSM14B	90	60.504	Cercocebus_atys
ENSSFOG00015004627	lsm14b	81	59.688	ENSCLAG00000003186	LSM14B	89	57.962	Chinchilla_lanigera
ENSSFOG00015004627	lsm14b	92	55.970	ENSCSAG00000015729	LSM14B	91	54.798	Chlorocebus_sabaeus
ENSSFOG00015004627	lsm14b	69	37.681	ENSCHOG00000006997	-	86	41.176	Choloepus_hoffmanni
ENSSFOG00015004627	lsm14b	92	55.224	ENSCPBG00000027065	LSM14B	91	53.788	Chrysemys_picta_bellii
ENSSFOG00015004627	lsm14b	81	58.125	ENSCANG00000036986	LSM14B	89	56.688	Colobus_angolensis_palliatus
ENSSFOG00015004627	lsm14b	92	62.254	ENSCGRG00001018399	Lsm14b	90	61.080	Cricetulus_griseus_chok1gshd
ENSSFOG00015004627	lsm14b	56	46.977	ENSCGRG00000002484	-	83	45.714	Cricetulus_griseus_crigri
ENSSFOG00015004627	lsm14b	62	47.292	ENSCGRG00000006111	-	90	46.570	Cricetulus_griseus_crigri
ENSSFOG00015004627	lsm14b	90	58.310	ENSCSEG00000004722	lsm14b	90	56.780	Cynoglossus_semilaevis
ENSSFOG00015004627	lsm14b	97	50.132	ENSCSEG00000020669	LSM14B	91	48.179	Cynoglossus_semilaevis
ENSSFOG00015004627	lsm14b	67	40.157	ENSCVAG00000012433	-	89	37.083	Cyprinodon_variegatus
ENSSFOG00015004627	lsm14b	92	61.864	ENSDARG00000025386	lsm14b	91	62.712	Danio_rerio
ENSSFOG00015004627	lsm14b	62	47.518	ENSDNOG00000025246	LSM14B	88	46.570	Dasypus_novemcinctus
ENSSFOG00015004627	lsm14b	82	57.895	ENSDORG00000016683	Lsm14b	88	46.209	Dipodomys_ordii
ENSSFOG00015004627	lsm14b	58	48.673	ENSETEG00000011188	-	90	48.624	Echinops_telfairi
ENSSFOG00015004627	lsm14b	93	50.272	ENSETEG00000001869	-	89	47.324	Echinops_telfairi
ENSSFOG00015004627	lsm14b	62	50.206	ENSEASG00005023218	LSM14B	88	46.931	Equus_asinus_asinus
ENSSFOG00015004627	lsm14b	92	62.222	ENSECAG00000010659	LSM14B	90	61.064	Equus_caballus
ENSSFOG00015004627	lsm14b	57	69.000	ENSEEUG00000007331	LSM14B	78	65.657	Erinaceus_europaeus
ENSSFOG00015004627	lsm14b	91	56.125	ENSELUG00000016299	LSM14B	100	56.736	Esox_lucius
ENSSFOG00015004627	lsm14b	99	67.277	ENSELUG00000005780	lsm14b	91	66.762	Esox_lucius
ENSSFOG00015004627	lsm14b	92	61.732	ENSFCAG00000003248	LSM14B	90	60.845	Felis_catus
ENSSFOG00015004627	lsm14b	82	52.186	ENSFALG00000010618	LSM14B	90	50.556	Ficedula_albicollis
ENSSFOG00015004627	lsm14b	81	58.438	ENSFDAG00000002214	LSM14B	89	56.688	Fukomys_damarensis
ENSSFOG00015004627	lsm14b	78	47.452	ENSFHEG00000003362	LSM14B	83	47.706	Fundulus_heteroclitus
ENSSFOG00015004627	lsm14b	92	55.556	ENSFHEG00000006237	lsm14b	90	56.686	Fundulus_heteroclitus
ENSSFOG00015004627	lsm14b	99	56.233	ENSGMOG00000017115	lsm14b	88	57.018	Gadus_morhua
ENSSFOG00015004627	lsm14b	92	61.202	ENSGALG00000005125	LSM14B	90	58.889	Gallus_gallus
ENSSFOG00015004627	lsm14b	68	44.141	ENSGAFG00000013723	LSM14B	85	41.667	Gambusia_affinis
ENSSFOG00015004627	lsm14b	91	51.811	ENSGAFG00000020318	lsm14b	90	51.253	Gambusia_affinis
ENSSFOG00015004627	lsm14b	91	60.114	ENSGACG00000009973	lsm14b	90	59.882	Gasterosteus_aculeatus
ENSSFOG00015004627	lsm14b	54	53.271	ENSGAGG00000004106	LSM14B	77	52.632	Gopherus_agassizii
ENSSFOG00015004627	lsm14b	83	57.669	ENSGGOG00000005630	LSM14B	85	56.250	Gorilla_gorilla
ENSSFOG00015004627	lsm14b	92	61.708	ENSHGLG00000015055	LSM14B	90	60.224	Heterocephalus_glaber_female
ENSSFOG00015004627	lsm14b	81	57.643	ENSHGLG00100015273	LSM14B	89	56.494	Heterocephalus_glaber_male
ENSSFOG00015004627	lsm14b	61	41.921	ENSHCOG00000004867	lsm14b	87	47.679	Hippocampus_comes
ENSSFOG00015004627	lsm14b	96	47.917	ENSHCOG00000018747	LSM14B	92	50.425	Hippocampus_comes
ENSSFOG00015004627	lsm14b	91	69.972	ENSIPUG00000014946	lsm14b	86	69.122	Ictalurus_punctatus
ENSSFOG00015004627	lsm14b	81	59.062	ENSSTOG00000020482	LSM14B	89	57.325	Ictidomys_tridecemlineatus
ENSSFOG00015004627	lsm14b	91	62.291	ENSJJAG00000012728	Lsm14b	89	60.795	Jaculus_jaculus
ENSSFOG00015004627	lsm14b	53	46.154	ENSKMAG00000012834	-	85	46.040	Kryptolebias_marmoratus
ENSSFOG00015004627	lsm14b	91	58.857	ENSKMAG00000017524	lsm14b	91	58.140	Kryptolebias_marmoratus
ENSSFOG00015004627	lsm14b	70	43.346	ENSLBEG00000007951	LSM14B	85	38.528	Labrus_bergylta
ENSSFOG00015004627	lsm14b	91	58.081	ENSLACG00000003849	LSM14B	91	57.468	Latimeria_chalumnae
ENSSFOG00015004627	lsm14b	100	70.558	ENSLOCG00000003746	lsm14b	100	70.051	Lepisosteus_oculatus
ENSSFOG00015004627	lsm14b	82	58.333	ENSLAFG00000007492	LSM14B	89	56.918	Loxodonta_africana
ENSSFOG00015004627	lsm14b	92	62.259	ENSMFAG00000041479	LSM14B	90	60.784	Macaca_fascicularis
ENSSFOG00015004627	lsm14b	92	62.259	ENSMMUG00000014084	LSM14B	90	60.784	Macaca_mulatta
ENSSFOG00015004627	lsm14b	92	62.259	ENSMNEG00000045573	LSM14B	90	60.784	Macaca_nemestrina
ENSSFOG00015004627	lsm14b	81	58.438	ENSMLEG00000040895	LSM14B	89	56.688	Mandrillus_leucophaeus
ENSSFOG00015004627	lsm14b	91	60.345	ENSMAMG00000020539	lsm14b	90	59.654	Mastacembelus_armatus
ENSSFOG00015004627	lsm14b	100	52.727	ENSMAMG00000024124	LSM14B	91	52.975	Mastacembelus_armatus
ENSSFOG00015004627	lsm14b	92	50.693	ENSMZEG00005026001	LSM14B	93	49.148	Maylandia_zebra
ENSSFOG00015004627	lsm14b	91	62.069	ENSMZEG00005000987	lsm14b	90	62.069	Maylandia_zebra
ENSSFOG00015004627	lsm14b	84	56.098	ENSMGAG00000005300	LSM14B	90	53.030	Meleagris_gallopavo
ENSSFOG00015004627	lsm14b	92	61.408	ENSMAUG00000020700	Lsm14b	90	60.172	Mesocricetus_auratus
ENSSFOG00015004627	lsm14b	92	62.810	ENSMICG00000014675	LSM14B	90	61.625	Microcebus_murinus
ENSSFOG00015004627	lsm14b	92	62.817	ENSMOCG00000020600	Lsm14b	90	61.364	Microtus_ochrogaster
ENSSFOG00015004627	lsm14b	63	43.382	ENSMOCG00000005119	-	91	43.774	Microtus_ochrogaster
ENSSFOG00015004627	lsm14b	91	54.972	ENSMMOG00000020042	lsm14b	93	54.294	Mola_mola
ENSSFOG00015004627	lsm14b	92	53.258	ENSMMOG00000017321	LSM14B	90	51.429	Mola_mola
ENSSFOG00015004627	lsm14b	62	48.936	ENSMODG00000016690	LSM14B	88	48.375	Monodelphis_domestica
ENSSFOG00015004627	lsm14b	99	56.464	ENSMALG00000004783	lsm14b	90	56.812	Monopterus_albus
ENSSFOG00015004627	lsm14b	93	51.934	ENSMALG00000022251	LSM14B	91	51.412	Monopterus_albus
ENSSFOG00015004627	lsm14b	92	61.667	MGP_CAROLIEiJ_G0024770	Lsm14b	90	60.224	Mus_caroli
ENSSFOG00015004627	lsm14b	92	61.667	ENSMUSG00000039108	Lsm14b	90	60.224	Mus_musculus
ENSSFOG00015004627	lsm14b	92	61.944	MGP_PahariEiJ_G0026214	Lsm14b	90	60.504	Mus_pahari
ENSSFOG00015004627	lsm14b	92	61.667	MGP_SPRETEiJ_G0025693	Lsm14b	90	60.224	Mus_spretus
ENSSFOG00015004627	lsm14b	87	51.451	ENSMPUG00000007584	LSM14B	91	50.134	Mustela_putorius_furo
ENSSFOG00015004627	lsm14b	91	62.745	ENSMLUG00000000304	LSM14B	90	61.517	Myotis_lucifugus
ENSSFOG00015004627	lsm14b	54	51.415	ENSNGAG00000016550	Lsm14b	84	52.284	Nannospalax_galili
ENSSFOG00015004627	lsm14b	81	58.438	ENSNLEG00000015757	LSM14B	89	57.006	Nomascus_leucogenys
ENSSFOG00015004627	lsm14b	67	76.429	ENSMEUG00000008267	-	67	73.239	Notamacropus_eugenii
ENSSFOG00015004627	lsm14b	64	45.122	ENSMEUG00000006305	-	97	49.289	Notamacropus_eugenii
ENSSFOG00015004627	lsm14b	92	62.810	ENSODEG00000004099	LSM14B	90	61.345	Octodon_degus
ENSSFOG00015004627	lsm14b	91	63.506	ENSONIG00000020318	lsm14b	90	63.506	Oreochromis_niloticus
ENSSFOG00015004627	lsm14b	73	54.737	ENSOANG00000003370	LSM14B	99	53.310	Ornithorhynchus_anatinus
ENSSFOG00015004627	lsm14b	82	58.075	ENSOCUG00000006279	LSM14B	89	56.329	Oryctolagus_cuniculus
ENSSFOG00015004627	lsm14b	94	49.584	ENSORLG00000028353	LSM14B	91	46.991	Oryzias_latipes
ENSSFOG00015004627	lsm14b	91	54.596	ENSORLG00000013525	lsm14b	90	56.772	Oryzias_latipes
ENSSFOG00015004627	lsm14b	64	38.697	ENSORLG00020018191	-	85	37.698	Oryzias_latipes_hni
ENSSFOG00015004627	lsm14b	91	54.596	ENSORLG00020020553	lsm14b	90	56.734	Oryzias_latipes_hni
ENSSFOG00015004627	lsm14b	94	49.448	ENSORLG00015013157	LSM14B	91	46.705	Oryzias_latipes_hsok
ENSSFOG00015004627	lsm14b	91	54.596	ENSORLG00015016862	lsm14b	90	56.734	Oryzias_latipes_hsok
ENSSFOG00015004627	lsm14b	91	54.190	ENSOMEG00000023917	lsm14b	90	56.358	Oryzias_melastigma
ENSSFOG00015004627	lsm14b	66	39.837	ENSOMEG00000000171	-	83	39.301	Oryzias_melastigma
ENSSFOG00015004627	lsm14b	92	55.890	ENSOGAG00000003915	LSM14B	91	54.798	Otolemur_garnettii
ENSSFOG00015004627	lsm14b	81	51.111	ENSOARG00000014706	LSM14B	88	50.000	Ovis_aries
ENSSFOG00015004627	lsm14b	83	57.669	ENSPPAG00000035799	LSM14B	85	56.250	Pan_paniscus
ENSSFOG00015004627	lsm14b	92	61.732	ENSPPRG00000009197	LSM14B	90	60.845	Panthera_pardus
ENSSFOG00015004627	lsm14b	62	49.378	ENSPTIG00000021518	LSM14B	91	46.909	Panthera_tigris_altaica
ENSSFOG00015004627	lsm14b	92	62.259	ENSPTRG00000013696	LSM14B	90	60.784	Pan_troglodytes
ENSSFOG00015004627	lsm14b	92	62.259	ENSPANG00000011747	LSM14B	90	60.784	Papio_anubis
ENSSFOG00015004627	lsm14b	100	76.240	ENSPKIG00000003275	lsm14b	100	75.718	Paramormyrops_kingsleyae
ENSSFOG00015004627	lsm14b	82	57.492	ENSPSIG00000014762	LSM14B	89	56.075	Pelodiscus_sinensis
ENSSFOG00015004627	lsm14b	91	62.011	ENSPEMG00000017688	Lsm14b	90	60.795	Peromyscus_maniculatus_bairdii
ENSSFOG00015004627	lsm14b	92	63.056	ENSPCIG00000013405	LSM14B	90	61.625	Phascolarctos_cinereus
ENSSFOG00015004627	lsm14b	96	57.143	ENSPFOG00000005631	lsm14b	90	56.286	Poecilia_formosa
ENSSFOG00015004627	lsm14b	91	48.711	ENSPLAG00000005793	LSM14B	90	48.991	Poecilia_latipinna
ENSSFOG00015004627	lsm14b	96	57.143	ENSPLAG00000002449	lsm14b	90	55.493	Poecilia_latipinna
ENSSFOG00015004627	lsm14b	92	57.593	ENSPMEG00000000745	lsm14b	90	57.101	Poecilia_mexicana
ENSSFOG00015004627	lsm14b	90	48.424	ENSPMEG00000022953	LSM14B	90	48.991	Poecilia_mexicana
ENSSFOG00015004627	lsm14b	63	39.683	ENSPREG00000007828	LSM14B	85	38.525	Poecilia_reticulata
ENSSFOG00015004627	lsm14b	92	55.220	ENSPPYG00000011194	LSM14B	90	55.402	Pongo_abelii
ENSSFOG00015004627	lsm14b	92	62.534	ENSPCOG00000013625	LSM14B	93	58.140	Propithecus_coquereli
ENSSFOG00015004627	lsm14b	71	48.387	ENSPVAG00000017918	LSM14B	88	48.043	Pteropus_vampyrus
ENSSFOG00015004627	lsm14b	100	68.504	ENSPNAG00000012777	lsm14b	100	70.361	Pygocentrus_nattereri
ENSSFOG00015004627	lsm14b	92	55.388	ENSRNOG00000054557	Lsm14b	91	54.293	Rattus_norvegicus
ENSSFOG00015004627	lsm14b	81	57.944	ENSRBIG00000033461	LSM14B	88	56.508	Rhinopithecus_bieti
ENSSFOG00015004627	lsm14b	83	59.021	ENSRROG00000042949	LSM14B	81	57.632	Rhinopithecus_roxellana
ENSSFOG00015004627	lsm14b	81	58.125	ENSSBOG00000032820	LSM14B	89	56.688	Saimiri_boliviensis_boliviensis
ENSSFOG00015004627	lsm14b	82	59.752	ENSSHAG00000015528	LSM14B	87	57.632	Sarcophilus_harrisii
ENSSFOG00015004627	lsm14b	90	60.335	ENSSMAG00000012725	lsm14b	90	60.684	Scophthalmus_maximus
ENSSFOG00015004627	lsm14b	100	54.337	ENSSMAG00000000135	LSM14B	91	53.239	Scophthalmus_maximus
ENSSFOG00015004627	lsm14b	93	55.525	ENSSDUG00000022770	LSM14B	91	54.674	Seriola_dumerili
ENSSFOG00015004627	lsm14b	91	61.173	ENSSDUG00000020977	lsm14b	91	61.173	Seriola_dumerili
ENSSFOG00015004627	lsm14b	63	47.656	ENSSLDG00000011354	-	87	45.455	Seriola_lalandi_dorsalis
ENSSFOG00015004627	lsm14b	54	50.000	ENSSARG00000007749	-	100	50.000	Sorex_araneus
ENSSFOG00015004627	lsm14b	92	55.970	ENSSPUG00000014360	LSM14B	93	59.292	Sphenodon_punctatus
ENSSFOG00015004627	lsm14b	91	62.170	ENSSPAG00000020915	lsm14b	89	61.584	Stegastes_partitus
ENSSFOG00015004627	lsm14b	67	42.966	ENSSPAG00000018854	-	86	39.834	Stegastes_partitus
ENSSFOG00015004627	lsm14b	92	60.606	ENSSSCG00000026052	LSM14B	75	60.224	Sus_scrofa
ENSSFOG00015004627	lsm14b	82	58.716	ENSTGUG00000007884	LSM14B	89	57.009	Taeniopygia_guttata
ENSSFOG00015004627	lsm14b	99	55.013	ENSTRUG00000011354	lsm14b	90	56.322	Takifugu_rubripes
ENSSFOG00015004627	lsm14b	93	52.893	ENSTRUG00000001529	LSM14B	91	51.695	Takifugu_rubripes
ENSSFOG00015004627	lsm14b	92	56.425	ENSTNIG00000002445	lsm14b	90	55.367	Tetraodon_nigroviridis
ENSSFOG00015004627	lsm14b	90	55.775	ENSUAMG00000025298	LSM14B	83	57.055	Ursus_americanus
ENSSFOG00015004627	lsm14b	90	55.775	ENSUMAG00000000480	LSM14B	83	57.055	Ursus_maritimus
ENSSFOG00015004627	lsm14b	82	58.204	ENSVVUG00000015920	LSM14B	88	57.098	Vulpes_vulpes
ENSSFOG00015004627	lsm14b	86	60.767	ENSXETG00000001997	lsm14b	100	58.876	Xenopus_tropicalis
ENSSFOG00015004627	lsm14b	91	55.072	ENSXMAG00000010013	lsm14b	90	55.072	Xiphophorus_maculatus