EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015004800 (Gene tree)
Gene ID
108932073
Gene Symbol
srsf1a
Alias
-
Full Name
serine/arginine-rich splicing factor 1
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Minus strand
Length
3049 bases
Position
chrKV410985.1:259040-262088
Accession
108932073
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015007256RRM_1PF00076.224.6e-3312
ENSSFOP00015007256RRM_1PF00076.224.6e-3322
ENSSFOP00015007260RRM_1PF00076.224.6e-3312
ENSSFOP00015007260RRM_1PF00076.224.6e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015007370-1198-ENSSFOP00015007260247 (aa)-A0A1W4ZSD6
ENSSFOT00015007366-1340XM_018748247ENSSFOP00015007256247 (aa)XP_018603763A0A1W4ZSD6
Gene Model
Click here to download ENSSFOG00015004800's gene model file
Pathways
Pathway IDPathway NameSource
sfm03040SpliceosomeKEGG
sfm05168Herpes simplex virus 1 infectionKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004800's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015004800srsf1a8398.068ENSSFOG00015004989-7698.068
ENSSFOG00015004800srsf1a9064.474ENSSFOG00015002476SRSF97369.832
ENSSFOG00015004800srsf1a6648.780ENSSFOG00015020292srsf48346.281
ENSSFOG00015004800srsf1a7169.886ENSSFOG00015017303srsf97171.023
ENSSFOG00015004800srsf1a6543.605ENSSFOG00015015169SRSF65443.023
ENSSFOG00015004800srsf1a6644.693ENSSFOG00015008377srsf56144.134
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015004800srsf1a9996.356ENSG00000136450SRSF19898.438Homo_sapiens
ENSSFOG00015004800srsf1a7791.623ENSAPOG00000002748-7891.623Acanthochromis_polyacanthus
ENSSFOG00015004800srsf1a7989.691ENSAPOG00000008542-8189.109Acanthochromis_polyacanthus
ENSSFOG00015004800srsf1a9994.694ENSAMEG00000002635SRSF19994.694Ailuropoda_melanoleuca
ENSSFOG00015004800srsf1a7792.147ENSACIG00000008091srsf1a8391.623Amphilophus_citrinellus
ENSSFOG00015004800srsf1a7792.147ENSAOCG00000010671-8392.147Amphiprion_ocellaris
ENSSFOG00015004800srsf1a7988.614ENSAOCG00000000337-8189.109Amphiprion_ocellaris
ENSSFOG00015004800srsf1a7792.147ENSAPEG00000009915-8392.147Amphiprion_percula
ENSSFOG00015004800srsf1a7988.614ENSAPEG00000023352-8089.109Amphiprion_percula
ENSSFOG00015004800srsf1a7792.147ENSATEG00000022403-7792.147Anabas_testudineus
ENSSFOG00015004800srsf1a7989.175ENSATEG00000021567-8189.691Anabas_testudineus
ENSSFOG00015004800srsf1a9997.166ENSACAG00000005542-9997.166Anolis_carolinensis
ENSSFOG00015004800srsf1a9896.327ENSANAG00000020583-9797.183Aotus_nancymaae
ENSSFOG00015004800srsf1a8069.036ENSANAG00000025417-7469.072Aotus_nancymaae
ENSSFOG00015004800srsf1a7485.922ENSAMXG00000024373-9485.922Astyanax_mexicanus
ENSSFOG00015004800srsf1a9491.632ENSAMXG00000035996srsf1a7992.965Astyanax_mexicanus
ENSSFOG00015004800srsf1a9996.356ENSBTAG00000014766SRSF19996.356Bos_taurus
ENSSFOG00015004800srsf1a9896.327ENSCJAG00000041713-9797.183Callithrix_jacchus
ENSSFOG00015004800srsf1a7986.294ENSCJAG00000008111-8887.817Callithrix_jacchus
ENSSFOG00015004800srsf1a9896.327ENSCAFG00000017430SRSF19796.327Canis_familiaris
ENSSFOG00015004800srsf1a9896.327ENSCAFG00020025632-9796.327Canis_lupus_dingo
ENSSFOG00015004800srsf1a9996.356ENSCHIG00000010787SRSF19996.356Capra_hircus
ENSSFOG00015004800srsf1a9896.327ENSTSYG00000013899-9797.183Carlito_syrichta
ENSSFOG00015004800srsf1a9996.356ENSCPOG00000032681-9996.356Cavia_porcellus
ENSSFOG00015004800srsf1a9996.356ENSCCAG00000029484-9996.356Cebus_capucinus
ENSSFOG00015004800srsf1a9896.327ENSCATG00000042294-9797.183Cercocebus_atys
ENSSFOG00015004800srsf1a9996.356ENSCLAG00000014707-9996.356Chinchilla_lanigera
ENSSFOG00015004800srsf1a9895.510ENSCSAG00000005642-9795.510Chlorocebus_sabaeus
ENSSFOG00015004800srsf1a9996.356ENSCHOG00000001899SRSF19996.356Choloepus_hoffmanni
ENSSFOG00015004800srsf1a9997.571ENSCPBG00000009851-9997.571Chrysemys_picta_bellii
ENSSFOG00015004800srsf1a9896.327ENSCANG00000029726-9797.183Colobus_angolensis_palliatus
ENSSFOG00015004800srsf1a9896.327ENSCGRG00001000670Srsf19796.327Cricetulus_griseus_chok1gshd
ENSSFOG00015004800srsf1a9996.356ENSCGRG00000005590Srsf19996.356Cricetulus_griseus_crigri
ENSSFOG00015004800srsf1a7881.517ENSCSEG00000009973-8181.991Cynoglossus_semilaevis
ENSSFOG00015004800srsf1a7792.670ENSCSEG00000014272-8191.099Cynoglossus_semilaevis
ENSSFOG00015004800srsf1a7787.692ENSCVAG00000005458-9187.432Cyprinodon_variegatus
ENSSFOG00015004800srsf1a7792.147ENSCVAG00000018617-7892.147Cyprinodon_variegatus
ENSSFOG00015004800srsf1a9897.143ENSDARG00000017843srsf1b9997.143Danio_rerio
ENSSFOG00015004800srsf1a9892.157ENSDARG00000057691srsf1a9992.157Danio_rerio
ENSSFOG00015004800srsf1a9896.327ENSDNOG00000011737-9796.327Dasypus_novemcinctus
ENSSFOG00015004800srsf1a9996.356ENSDORG00000015082Srsf19996.356Dipodomys_ordii
ENSSFOG00015004800srsf1a7391.803ENSETEG00000005349-6394.536Echinops_telfairi
ENSSFOG00015004800srsf1a9896.327ENSEASG00005002922-9796.327Equus_asinus_asinus
ENSSFOG00015004800srsf1a9996.356ENSECAG00000016654SRSF19996.356Equus_caballus
ENSSFOG00015004800srsf1a7395.628ENSEEUG00000009255-6395.628Erinaceus_europaeus
ENSSFOG00015004800srsf1a7894.819ENSELUG00000021646srsf1a7795.337Esox_lucius
ENSSFOG00015004800srsf1a9896.327ENSFCAG00000002250-9796.327Felis_catus
ENSSFOG00015004800srsf1a9881.224ENSFALG00000005062-9781.224Ficedula_albicollis
ENSSFOG00015004800srsf1a9996.356ENSFDAG00000010646-9996.356Fukomys_damarensis
ENSSFOG00015004800srsf1a7792.147ENSFHEG00000003174srsf1a8392.147Fundulus_heteroclitus
ENSSFOG00015004800srsf1a9188.053ENSGMOG00000014787-8090.576Gadus_morhua
ENSSFOG00015004800srsf1a9997.571ENSGALG00000005525SRSF19997.571Gallus_gallus
ENSSFOG00015004800srsf1a7987.629ENSGACG00000020621srsf1b7987.113Gasterosteus_aculeatus
ENSSFOG00015004800srsf1a9897.551ENSGAGG00000022965-9797.551Gopherus_agassizii
ENSSFOG00015004800srsf1a9896.327ENSGGOG00000004386SRSF19797.183Gorilla_gorilla
ENSSFOG00015004800srsf1a7792.147ENSHBUG00000016788srsf1a8289.286Haplochromis_burtoni
ENSSFOG00015004800srsf1a8696.279ENSHGLG00000000669-10096.279Heterocephalus_glaber_female
ENSSFOG00015004800srsf1a8696.279ENSHGLG00000000600-10096.279Heterocephalus_glaber_female
ENSSFOG00015004800srsf1a9996.356ENSHGLG00100016906-9996.356Heterocephalus_glaber_male
ENSSFOG00015004800srsf1a7784.772ENSHCOG00000018918srsf1a7787.817Hippocampus_comes
ENSSFOG00015004800srsf1a9490.795ENSIPUG00000017039srsf1a7993.467Ictalurus_punctatus
ENSSFOG00015004800srsf1a9996.748ENSIPUG00000008750srsf1b9996.748Ictalurus_punctatus
ENSSFOG00015004800srsf1a9996.356ENSSTOG00000000243-9996.356Ictidomys_tridecemlineatus
ENSSFOG00015004800srsf1a9996.356ENSJJAG00000000102-9996.356Jaculus_jaculus
ENSSFOG00015004800srsf1a5085.600ENSJJAG00000014464-9490.400Jaculus_jaculus
ENSSFOG00015004800srsf1a7792.708ENSKMAG00000019232srsf1a7892.188Kryptolebias_marmoratus
ENSSFOG00015004800srsf1a7793.194ENSLBEG00000020864-8393.194Labrus_bergylta
ENSSFOG00015004800srsf1a7983.920ENSLBEG00000015294-8085.427Labrus_bergylta
ENSSFOG00015004800srsf1a7994.388ENSLACG00000014160srsf1a7395.855Latimeria_chalumnae
ENSSFOG00015004800srsf1a9997.154ENSLOCG00000005994srsf1a9997.154Lepisosteus_oculatus
ENSSFOG00015004800srsf1a9996.356ENSLAFG00000025743SRSF19996.356Loxodonta_africana
ENSSFOG00015004800srsf1a9996.356ENSMFAG00000040003-9996.356Macaca_fascicularis
ENSSFOG00015004800srsf1a9990.688ENSMMUG00000003260-9490.769Macaca_mulatta
ENSSFOG00015004800srsf1a9896.327ENSMMUG00000004725SRSF19797.183Macaca_mulatta
ENSSFOG00015004800srsf1a9990.283ENSMNEG00000015983-7792.857Macaca_nemestrina
ENSSFOG00015004800srsf1a9896.327ENSMNEG00000027680-9797.183Macaca_nemestrina
ENSSFOG00015004800srsf1a9991.429ENSMLEG00000015243-7792.268Mandrillus_leucophaeus
ENSSFOG00015004800srsf1a9996.356ENSMLEG00000040509SRSF19996.356Mandrillus_leucophaeus
ENSSFOG00015004800srsf1a7994.359ENSMAMG00000019691-8194.359Mastacembelus_armatus
ENSSFOG00015004800srsf1a7990.206ENSMAMG00000019687-7989.691Mastacembelus_armatus
ENSSFOG00015004800srsf1a7792.147ENSMAMG00000018454-7892.147Mastacembelus_armatus
ENSSFOG00015004800srsf1a9996.356ENSMAUG00000021845Srsf19996.356Mesocricetus_auratus
ENSSFOG00015004800srsf1a9896.327ENSMICG00000013639-9797.183Microcebus_murinus
ENSSFOG00015004800srsf1a9996.356ENSMOCG00000001996Srsf19996.356Microtus_ochrogaster
ENSSFOG00015004800srsf1a7793.194ENSMMOG00000014354srsf1a8393.194Mola_mola
ENSSFOG00015004800srsf1a7395.652ENSMODG00000014781-6395.652Monodelphis_domestica
ENSSFOG00015004800srsf1a7792.147ENSMALG00000017129-7592.147Monopterus_albus
ENSSFOG00015004800srsf1a8179.000ENSMALG00000007763-7982.474Monopterus_albus
ENSSFOG00015004800srsf1a9996.356MGP_CAROLIEiJ_G0016943Srsf19996.356Mus_caroli
ENSSFOG00015004800srsf1a9996.356ENSMUSG00000018379Srsf19996.356Mus_musculus
ENSSFOG00015004800srsf1a9996.356MGP_PahariEiJ_G0018074Srsf19996.356Mus_pahari
ENSSFOG00015004800srsf1a9996.356MGP_SPRETEiJ_G0017790Srsf19996.356Mus_spretus
ENSSFOG00015004800srsf1a9996.356ENSMPUG00000015369SRSF19996.356Mustela_putorius_furo
ENSSFOG00015004800srsf1a8189.500ENSMLUG00000023995-7989.691Myotis_lucifugus
ENSSFOG00015004800srsf1a9996.356ENSMLUG00000011040SRSF19996.356Myotis_lucifugus
ENSSFOG00015004800srsf1a9996.356ENSNGAG00000011395Srsf19996.356Nannospalax_galili
ENSSFOG00015004800srsf1a9980.081ENSNBRG00000008041srsf1b7980.412Neolamprologus_brichardi
ENSSFOG00015004800srsf1a9896.327ENSNLEG00000008088-9797.183Nomascus_leucogenys
ENSSFOG00015004800srsf1a5094.444ENSMEUG00000002783-9994.444Notamacropus_eugenii
ENSSFOG00015004800srsf1a7395.628ENSOPRG00000001234-10095.628Ochotona_princeps
ENSSFOG00015004800srsf1a9995.968ENSODEG00000011481-10095.968Octodon_degus
ENSSFOG00015004800srsf1a7990.256ENSONIG00000013160-7791.623Oreochromis_niloticus
ENSSFOG00015004800srsf1a9591.489ENSONIG00000004860-8094.359Oreochromis_niloticus
ENSSFOG00015004800srsf1a9870.325ENSOCUG00000010894-7573.545Oryctolagus_cuniculus
ENSSFOG00015004800srsf1a7792.147ENSORLG00000004580srsf1a7892.147Oryzias_latipes
ENSSFOG00015004800srsf1a7792.147ENSORLG00020009456srsf1a8392.147Oryzias_latipes_hni
ENSSFOG00015004800srsf1a7792.147ENSORLG00015014384srsf1a8392.147Oryzias_latipes_hsok
ENSSFOG00015004800srsf1a7090.230ENSOMEG00000004106srsf1a7190.230Oryzias_melastigma
ENSSFOG00015004800srsf1a9996.356ENSOGAG00000025950-9996.356Otolemur_garnettii
ENSSFOG00015004800srsf1a9993.878ENSOARG00000008323SRSF19993.878Ovis_aries
ENSSFOG00015004800srsf1a9996.356ENSPPAG00000043403-9996.356Pan_paniscus
ENSSFOG00015004800srsf1a9996.356ENSPPRG00000004238-9996.356Panthera_pardus
ENSSFOG00015004800srsf1a9896.327ENSPTRG00000049077SRSF19797.183Pan_troglodytes
ENSSFOG00015004800srsf1a9896.327ENSPANG00000022305-9797.183Papio_anubis
ENSSFOG00015004800srsf1a9874.897ENSPANG00000030275-7469.430Papio_anubis
ENSSFOG00015004800srsf1a9897.531ENSPKIG00000007204srsf1a9997.531Paramormyrops_kingsleyae
ENSSFOG00015004800srsf1a9997.561ENSPKIG00000012857srsf1b9997.561Paramormyrops_kingsleyae
ENSSFOG00015004800srsf1a7986.869ENSPSIG00000009000-7897.222Pelodiscus_sinensis
ENSSFOG00015004800srsf1a7790.052ENSPMGG00000013112-8289.005Periophthalmus_magnuspinnatus
ENSSFOG00015004800srsf1a9487.124ENSPMGG00000005467-7787.978Periophthalmus_magnuspinnatus
ENSSFOG00015004800srsf1a9996.356ENSPEMG00000021416Srsf19996.356Peromyscus_maniculatus_bairdii
ENSSFOG00015004800srsf1a9996.371ENSPCIG00000006076-9996.371Phascolarctos_cinereus
ENSSFOG00015004800srsf1a7987.879ENSPFOG00000018325-7088.144Poecilia_formosa
ENSSFOG00015004800srsf1a7987.879ENSPLAG00000008416srsf1b7988.144Poecilia_latipinna
ENSSFOG00015004800srsf1a7987.879ENSPMEG00000002388-7988.144Poecilia_mexicana
ENSSFOG00015004800srsf1a7792.147ENSPREG00000009667srsf1a7892.147Poecilia_reticulata
ENSSFOG00015004800srsf1a9996.356ENSPPYG00000008240SRSF19996.356Pongo_abelii
ENSSFOG00015004800srsf1a9996.356ENSPCAG00000005199SRSF19996.356Procavia_capensis
ENSSFOG00015004800srsf1a9996.356ENSPCOG00000023654-9996.356Propithecus_coquereli
ENSSFOG00015004800srsf1a7974.627ENSPCOG00000025736-9475.648Propithecus_coquereli
ENSSFOG00015004800srsf1a7598.438ENSPVAG00000000519-7598.438Pteropus_vampyrus
ENSSFOG00015004800srsf1a9996.327ENSPNAG00000014601srsf1b9996.327Pygocentrus_nattereri
ENSSFOG00015004800srsf1a9495.690ENSPNAG00000022241srsf1a7895.833Pygocentrus_nattereri
ENSSFOG00015004800srsf1a9996.356ENSRNOG00000050323Srsf19996.356Rattus_norvegicus
ENSSFOG00015004800srsf1a9896.327ENSRBIG00000034445-9797.183Rhinopithecus_bieti
ENSSFOG00015004800srsf1a9996.356ENSRROG00000041506-9996.356Rhinopithecus_roxellana
ENSSFOG00015004800srsf1a9996.356ENSSBOG00000025377-9996.356Saimiri_boliviensis_boliviensis
ENSSFOG00015004800srsf1a9996.371ENSSHAG00000002552-9996.371Sarcophilus_harrisii
ENSSFOG00015004800srsf1a9387.029ENSSMAG00000009719-8087.192Scophthalmus_maximus
ENSSFOG00015004800srsf1a7792.670ENSSMAG00000007018-7892.670Scophthalmus_maximus
ENSSFOG00015004800srsf1a7793.194ENSSDUG00000011303-8393.194Seriola_dumerili
ENSSFOG00015004800srsf1a9975.600ENSSDUG00000003929-8383.417Seriola_dumerili
ENSSFOG00015004800srsf1a9476.496ENSSLDG00000016895-7786.885Seriola_lalandi_dorsalis
ENSSFOG00015004800srsf1a7793.194ENSSLDG00000010543-7893.194Seriola_lalandi_dorsalis
ENSSFOG00015004800srsf1a7979.487ENSSLDG00000016868-7778.974Seriola_lalandi_dorsalis
ENSSFOG00015004800srsf1a7395.628ENSSARG00000010949-6395.628Sorex_araneus
ENSSFOG00015004800srsf1a9897.551ENSSPUG00000000804-9797.551Sphenodon_punctatus
ENSSFOG00015004800srsf1a7985.577ENSSPAG00000014152-8186.058Stegastes_partitus
ENSSFOG00015004800srsf1a7792.188ENSSPAG00000022562-7892.188Stegastes_partitus
ENSSFOG00015004800srsf1a9996.356ENSSSCG00000017626-9996.356Sus_scrofa
ENSSFOG00015004800srsf1a7497.283ENSTGUG00000008416-10097.283Taeniopygia_guttata
ENSSFOG00015004800srsf1a7791.623ENSTRUG00000003691srsf1a7891.623Takifugu_rubripes
ENSSFOG00015004800srsf1a7989.744ENSTNIG00000016223srsf1a7791.623Tetraodon_nigroviridis
ENSSFOG00015004800srsf1a7390.710ENSTBEG00000015378-6393.443Tupaia_belangeri
ENSSFOG00015004800srsf1a7395.628ENSTTRG00000007310SRSF110095.628Tursiops_truncatus
ENSSFOG00015004800srsf1a9996.356ENSUAMG00000009858SRSF19996.356Ursus_americanus
ENSSFOG00015004800srsf1a9896.327ENSUMAG00000000455-9796.327Ursus_maritimus
ENSSFOG00015004800srsf1a9995.951ENSVPAG00000010094SRSF19995.951Vicugna_pacos
ENSSFOG00015004800srsf1a9896.327ENSVVUG00000011882-9796.327Vulpes_vulpes
ENSSFOG00015004800srsf1a9995.918ENSXETG00000008954srsf18995.918Xenopus_tropicalis
ENSSFOG00015004800srsf1a7792.147ENSXMAG00000011766srsf1a7892.147Xiphophorus_maculatus

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