EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015004850 (Gene tree)
Gene ID: 108928131
Gene Symbol: pus3
Alias: fj78b12|wu:fj78b12|zgc:56653
Full Name: pseudouridine synthase 3
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 6920 bases
Position: chrKV410884.1:3602996-3609915
Accession: 108928131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015007385	PseudoU_synth_1	PF01416.20	3.1e-30	1	1
ENSSFOP00015007366	PseudoU_synth_1	PF01416.20	3.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015007494	-	1311	-	ENSSFOP00015007385	436 (aa)	-	-
ENSSFOT00015007476	-	4010	XM_018741912	ENSSFOP00015007366	461 (aa)	XP_018597428	A0A0P7T7F2

Gene Model

Click here to download ENSSFOG00015004850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004850	pus3	92	53.812	ENSG00000110060	PUS3	91	61.146	Homo_sapiens
ENSSFOG00015004850	pus3	98	73.893	ENSAPOG00000019483	pus3	98	73.893	Acanthochromis_polyacanthus
ENSSFOG00015004850	pus3	91	55.607	ENSAMEG00000000144	PUS3	88	55.607	Ailuropoda_melanoleuca
ENSSFOG00015004850	pus3	80	80.357	ENSACIG00000024479	pus3	100	80.357	Amphilophus_citrinellus
ENSSFOG00015004850	pus3	93	75.430	ENSAOCG00000006589	pus3	97	69.165	Amphiprion_ocellaris
ENSSFOG00015004850	pus3	93	75.184	ENSAPEG00000014617	pus3	97	69.462	Amphiprion_percula
ENSSFOG00015004850	pus3	96	72.483	ENSATEG00000022731	pus3	94	72.045	Anabas_testudineus
ENSSFOG00015004850	pus3	91	56.977	ENSAPLG00000013285	PUS3	97	56.977	Anas_platyrhynchos
ENSSFOG00015004850	pus3	92	52.667	ENSACAG00000000186	PUS3	93	53.364	Anolis_carolinensis
ENSSFOG00015004850	pus3	50	30.081	ENSACAG00000014111	PUSL1	86	30.081	Anolis_carolinensis
ENSSFOG00015004850	pus3	92	54.120	ENSANAG00000035614	PUS3	87	56.295	Aotus_nancymaae
ENSSFOG00015004850	pus3	94	76.886	ENSACLG00000007356	pus3	96	72.667	Astatotilapia_calliptera
ENSSFOG00015004850	pus3	96	67.333	ENSAMXG00000019534	pus3	94	67.188	Astyanax_mexicanus
ENSSFOG00015004850	pus3	91	56.308	ENSBTAG00000014339	PUS3	88	56.308	Bos_taurus
ENSSFOG00015004850	pus3	82	37.940	WBGene00006473	tag-124	95	37.789	Caenorhabditis_elegans
ENSSFOG00015004850	pus3	92	53.201	ENSCJAG00000046645	PUS3	87	55.294	Callithrix_jacchus
ENSSFOG00015004850	pus3	91	55.374	ENSCAFG00000010534	PUS3	88	55.374	Canis_familiaris
ENSSFOG00015004850	pus3	91	55.374	ENSCAFG00020010659	PUS3	88	55.374	Canis_lupus_dingo
ENSSFOG00015004850	pus3	92	55.916	ENSCHIG00000012260	PUS3	89	55.916	Capra_hircus
ENSSFOG00015004850	pus3	90	56.635	ENSTSYG00000014744	PUS3	87	56.635	Carlito_syrichta
ENSSFOG00015004850	pus3	91	56.206	ENSCAPG00000012231	PUS3	88	56.206	Cavia_aperea
ENSSFOG00015004850	pus3	91	56.206	ENSCPOG00000032587	PUS3	88	56.206	Cavia_porcellus
ENSSFOG00015004850	pus3	92	54.018	ENSCCAG00000035999	PUS3	87	56.190	Cebus_capucinus
ENSSFOG00015004850	pus3	91	55.035	ENSCATG00000043123	PUS3	88	55.035	Cercocebus_atys
ENSSFOG00015004850	pus3	91	57.377	ENSCLAG00000014947	PUS3	88	57.377	Chinchilla_lanigera
ENSSFOG00015004850	pus3	91	55.269	ENSCSAG00000002281	PUS3	88	55.478	Chlorocebus_sabaeus
ENSSFOG00015004850	pus3	80	57.735	ENSCHOG00000008442	PUS3	94	57.735	Choloepus_hoffmanni
ENSSFOG00015004850	pus3	50	51.230	ENSCPBG00000011173	PUS3	86	51.230	Chrysemys_picta_bellii
ENSSFOG00015004850	pus3	71	36.257	ENSCING00000009062	-	66	36.257	Ciona_intestinalis
ENSSFOG00015004850	pus3	86	35.990	ENSCSAVG00000002211	-	92	36.341	Ciona_savignyi
ENSSFOG00015004850	pus3	91	54.884	ENSCANG00000038729	PUS3	88	54.884	Colobus_angolensis_palliatus
ENSSFOG00015004850	pus3	92	54.607	ENSCGRG00001019842	Pus3	88	55.896	Cricetulus_griseus_chok1gshd
ENSSFOG00015004850	pus3	92	54.157	ENSCGRG00000010155	Pus3	88	55.425	Cricetulus_griseus_crigri
ENSSFOG00015004850	pus3	95	69.340	ENSCSEG00000007948	pus3	93	70.047	Cynoglossus_semilaevis
ENSSFOG00015004850	pus3	96	70.022	ENSCVAG00000022150	pus3	95	70.022	Cyprinodon_variegatus
ENSSFOG00015004850	pus3	96	72.286	ENSDARG00000028976	pus3	94	72.286	Danio_rerio
ENSSFOG00015004850	pus3	91	54.419	ENSDNOG00000040719	PUS3	88	54.419	Dasypus_novemcinctus
ENSSFOG00015004850	pus3	91	57.209	ENSDORG00000001819	Pus3	88	57.209	Dipodomys_ordii
ENSSFOG00015004850	pus3	89	40.870	FBgn0034703	CG3045	82	42.005	Drosophila_melanogaster
ENSSFOG00015004850	pus3	91	49.425	ENSETEG00000013067	PUS3	89	47.588	Echinops_telfairi
ENSSFOG00015004850	pus3	93	50.211	ENSEBUG00000002154	pus3	68	50.211	Eptatretus_burgeri
ENSSFOG00015004850	pus3	91	56.338	ENSEASG00005023003	PUS3	88	56.338	Equus_asinus_asinus
ENSSFOG00015004850	pus3	91	56.338	ENSECAG00000007581	PUS3	88	56.338	Equus_caballus
ENSSFOG00015004850	pus3	91	54.695	ENSEEUG00000010543	PUS3	88	54.695	Erinaceus_europaeus
ENSSFOG00015004850	pus3	99	71.274	ENSELUG00000004425	pus3	99	70.953	Esox_lucius
ENSSFOG00015004850	pus3	91	54.713	ENSFCAG00000005340	PUS3	88	54.713	Felis_catus
ENSSFOG00015004850	pus3	96	54.255	ENSFALG00000005159	PUS3	94	53.830	Ficedula_albicollis
ENSSFOG00015004850	pus3	92	54.607	ENSFDAG00000020745	PUS3	88	56.604	Fukomys_damarensis
ENSSFOG00015004850	pus3	99	68.467	ENSFHEG00000010984	pus3	90	68.251	Fundulus_heteroclitus
ENSSFOG00015004850	pus3	96	65.826	ENSGMOG00000004534	pus3	99	65.826	Gadus_morhua
ENSSFOG00015004850	pus3	93	54.204	ENSGALG00000000962	PUS3	95	54.305	Gallus_gallus
ENSSFOG00015004850	pus3	99	69.264	ENSGAFG00000005615	pus3	98	69.264	Gambusia_affinis
ENSSFOG00015004850	pus3	89	76.531	ENSGACG00000002125	pus3	93	71.926	Gasterosteus_aculeatus
ENSSFOG00015004850	pus3	94	55.281	ENSGAGG00000000160	PUS3	90	55.281	Gopherus_agassizii
ENSSFOG00015004850	pus3	91	56.308	ENSGGOG00000015047	PUS3	88	56.308	Gorilla_gorilla
ENSSFOG00015004850	pus3	94	75.912	ENSHBUG00000016532	pus3	96	71.778	Haplochromis_burtoni
ENSSFOG00015004850	pus3	95	48.492	ENSHGLG00000018861	-	94	48.492	Heterocephalus_glaber_female
ENSSFOG00015004850	pus3	91	51.683	ENSHGLG00000006599	-	84	51.683	Heterocephalus_glaber_female
ENSSFOG00015004850	pus3	91	56.440	ENSHGLG00000000565	PUS3	88	56.440	Heterocephalus_glaber_female
ENSSFOG00015004850	pus3	63	62.182	ENSHGLG00000015753	-	77	62.182	Heterocephalus_glaber_female
ENSSFOG00015004850	pus3	62	57.196	ENSHGLG00100002435	-	94	57.196	Heterocephalus_glaber_male
ENSSFOG00015004850	pus3	92	54.286	ENSHGLG00100014825	-	88	54.286	Heterocephalus_glaber_male
ENSSFOG00015004850	pus3	67	62.373	ENSHGLG00100008656	-	95	62.373	Heterocephalus_glaber_male
ENSSFOG00015004850	pus3	95	47.045	ENSHGLG00100011339	-	94	47.045	Heterocephalus_glaber_male
ENSSFOG00015004850	pus3	70	55.660	ENSHGLG00100007519	-	71	55.660	Heterocephalus_glaber_male
ENSSFOG00015004850	pus3	99	67.033	ENSHCOG00000015705	pus3	99	66.593	Hippocampus_comes
ENSSFOG00015004850	pus3	99	67.763	ENSIPUG00000000105	pus3	96	67.763	Ictalurus_punctatus
ENSSFOG00015004850	pus3	91	56.542	ENSSTOG00000003721	PUS3	89	56.542	Ictidomys_tridecemlineatus
ENSSFOG00015004850	pus3	93	52.967	ENSJJAG00000011306	Pus3	90	55.172	Jaculus_jaculus
ENSSFOG00015004850	pus3	91	76.826	ENSKMAG00000016715	pus3	96	70.153	Kryptolebias_marmoratus
ENSSFOG00015004850	pus3	95	70.922	ENSLBEG00000004143	pus3	97	69.954	Labrus_bergylta
ENSSFOG00015004850	pus3	94	53.319	ENSLACG00000011161	PUS3	84	56.250	Latimeria_chalumnae
ENSSFOG00015004850	pus3	97	71.522	ENSLOCG00000011922	pus3	99	71.366	Lepisosteus_oculatus
ENSSFOG00015004850	pus3	91	54.608	ENSLAFG00000000535	PUS3	88	54.608	Loxodonta_africana
ENSSFOG00015004850	pus3	91	55.399	ENSMFAG00000041002	PUS3	88	55.399	Macaca_fascicularis
ENSSFOG00015004850	pus3	91	55.399	ENSMMUG00000041875	PUS3	88	55.399	Macaca_mulatta
ENSSFOG00015004850	pus3	91	55.399	ENSMNEG00000045347	PUS3	88	55.399	Macaca_nemestrina
ENSSFOG00015004850	pus3	91	55.035	ENSMLEG00000029053	PUS3	88	55.035	Mandrillus_leucophaeus
ENSSFOG00015004850	pus3	97	71.491	ENSMAMG00000016741	pus3	96	71.711	Mastacembelus_armatus
ENSSFOG00015004850	pus3	94	76.642	ENSMZEG00005015950	pus3	96	72.444	Maylandia_zebra
ENSSFOG00015004850	pus3	83	58.333	ENSMGAG00000000851	PUS3	95	58.333	Meleagris_gallopavo
ENSSFOG00015004850	pus3	92	53.933	ENSMAUG00000015873	Pus3	88	55.896	Mesocricetus_auratus
ENSSFOG00015004850	pus3	91	54.801	ENSMICG00000032941	PUS3	88	54.801	Microcebus_murinus
ENSSFOG00015004850	pus3	92	53.933	ENSMOCG00000004901	Pus3	88	55.425	Microtus_ochrogaster
ENSSFOG00015004850	pus3	59	30.175	ENSMOCG00000005602	Pusl1	91	30.175	Microtus_ochrogaster
ENSSFOG00015004850	pus3	96	75.118	ENSMMOG00000013909	pus3	94	75.118	Mola_mola
ENSSFOG00015004850	pus3	92	54.157	ENSMODG00000004222	PUS3	96	54.157	Monodelphis_domestica
ENSSFOG00015004850	pus3	94	74.533	ENSMALG00000022420	pus3	93	74.533	Monopterus_albus
ENSSFOG00015004850	pus3	92	52.423	MGP_CAROLIEiJ_G0031957	Pus3	95	58.842	Mus_caroli
ENSSFOG00015004850	pus3	92	52.203	ENSMUSG00000032103	Pus3	95	58.521	Mus_musculus
ENSSFOG00015004850	pus3	89	54.545	MGP_PahariEiJ_G0014822	Pus3	95	59.406	Mus_pahari
ENSSFOG00015004850	pus3	92	51.876	MGP_SPRETEiJ_G0033081	Pus3	95	58.842	Mus_spretus
ENSSFOG00015004850	pus3	91	56.279	ENSMPUG00000006568	PUS3	88	56.279	Mustela_putorius_furo
ENSSFOG00015004850	pus3	91	54.930	ENSMLUG00000030636	PUS3	88	54.930	Myotis_lucifugus
ENSSFOG00015004850	pus3	91	55.711	ENSNGAG00000013868	Pus3	90	53.881	Nannospalax_galili
ENSSFOG00015004850	pus3	94	77.129	ENSNBRG00000015864	pus3	97	72.889	Neolamprologus_brichardi
ENSSFOG00015004850	pus3	91	56.019	ENSNLEG00000007460	PUS3	88	56.221	Nomascus_leucogenys
ENSSFOG00015004850	pus3	78	62.162	ENSMEUG00000014040	PUS3	72	62.162	Notamacropus_eugenii
ENSSFOG00015004850	pus3	95	54.464	ENSOPRG00000007888	-	91	54.464	Ochotona_princeps
ENSSFOG00015004850	pus3	91	57.143	ENSODEG00000004280	PUS3	88	57.143	Octodon_degus
ENSSFOG00015004850	pus3	94	74.941	ENSONIG00000016224	pus3	96	74.941	Oreochromis_niloticus
ENSSFOG00015004850	pus3	93	57.981	ENSOANG00000000406	PUS3	89	57.981	Ornithorhynchus_anatinus
ENSSFOG00015004850	pus3	91	54.608	ENSOCUG00000004468	PUS3	83	54.608	Oryctolagus_cuniculus
ENSSFOG00015004850	pus3	99	69.631	ENSORLG00000008445	pus3	97	68.980	Oryzias_latipes
ENSSFOG00015004850	pus3	99	70.282	ENSORLG00020008847	pus3	97	69.631	Oryzias_latipes_hni
ENSSFOG00015004850	pus3	99	68.094	ENSORLG00015007438	pus3	99	67.452	Oryzias_latipes_hsok
ENSSFOG00015004850	pus3	99	69.330	ENSOMEG00000014321	pus3	98	69.546	Oryzias_melastigma
ENSSFOG00015004850	pus3	92	53.795	ENSOGAG00000008913	PUS3	88	55.059	Otolemur_garnettii
ENSSFOG00015004850	pus3	50	30.165	ENSOARG00000004905	PUSL1	84	30.165	Ovis_aries
ENSSFOG00015004850	pus3	92	55.889	ENSOARG00000011870	PUS3	89	55.889	Ovis_aries
ENSSFOG00015004850	pus3	90	55.556	ENSPPAG00000025809	PUS3	88	55.765	Pan_paniscus
ENSSFOG00015004850	pus3	91	54.483	ENSPPRG00000005662	PUS3	88	54.483	Panthera_pardus
ENSSFOG00015004850	pus3	91	54.713	ENSPTIG00000001192	PUS3	88	54.713	Panthera_tigris_altaica
ENSSFOG00015004850	pus3	90	55.556	ENSPTRG00000004449	PUS3	88	55.765	Pan_troglodytes
ENSSFOG00015004850	pus3	91	55.035	ENSPANG00000013782	PUS3	88	55.035	Papio_anubis
ENSSFOG00015004850	pus3	100	76.890	ENSPKIG00000000646	pus3	100	76.890	Paramormyrops_kingsleyae
ENSSFOG00015004850	pus3	94	55.134	ENSPSIG00000013961	PUS3	90	55.134	Pelodiscus_sinensis
ENSSFOG00015004850	pus3	92	74.020	ENSPMGG00000000911	pus3	95	72.902	Periophthalmus_magnuspinnatus
ENSSFOG00015004850	pus3	92	54.018	ENSPEMG00000009602	Pus3	88	55.634	Peromyscus_maniculatus_bairdii
ENSSFOG00015004850	pus3	91	55.069	ENSPCIG00000010225	PUS3	94	55.069	Phascolarctos_cinereus
ENSSFOG00015004850	pus3	95	72.960	ENSPFOG00000009447	pus3	98	72.960	Poecilia_formosa
ENSSFOG00015004850	pus3	99	69.264	ENSPLAG00000023343	pus3	98	69.264	Poecilia_latipinna
ENSSFOG00015004850	pus3	99	69.697	ENSPMEG00000009870	pus3	98	69.697	Poecilia_mexicana
ENSSFOG00015004850	pus3	71	73.273	ENSPREG00000003179	pus3	64	73.273	Poecilia_reticulata
ENSSFOG00015004850	pus3	91	56.308	ENSPPYG00000004039	PUS3	88	56.308	Pongo_abelii
ENSSFOG00015004850	pus3	92	53.125	ENSPCAG00000000441	PUS3	88	54.588	Procavia_capensis
ENSSFOG00015004850	pus3	91	55.765	ENSPCOG00000019330	PUS3	88	55.765	Propithecus_coquereli
ENSSFOG00015004850	pus3	91	55.399	ENSPVAG00000002606	PUS3	88	55.399	Pteropus_vampyrus
ENSSFOG00015004850	pus3	94	76.886	ENSPNYG00000019615	pus3	96	72.667	Pundamilia_nyererei
ENSSFOG00015004850	pus3	99	69.510	ENSPNAG00000014541	pus3	97	69.379	Pygocentrus_nattereri
ENSSFOG00015004850	pus3	92	52.242	ENSRNOG00000012994	Pus3	88	54.009	Rattus_norvegicus
ENSSFOG00015004850	pus3	92	54.884	ENSRBIG00000044456	PUS3	89	55.093	Rhinopithecus_bieti
ENSSFOG00015004850	pus3	91	55.399	ENSRROG00000035245	PUS3	88	55.607	Rhinopithecus_roxellana
ENSSFOG00015004850	pus3	79	37.368	YFL001W	DEG1	74	38.418	Saccharomyces_cerevisiae
ENSSFOG00015004850	pus3	92	54.120	ENSSBOG00000022433	PUS3	87	56.295	Saimiri_boliviensis_boliviensis
ENSSFOG00015004850	pus3	93	53.167	ENSSHAG00000001382	PUS3	90	53.167	Sarcophilus_harrisii
ENSSFOG00015004850	pus3	90	75.949	ENSSMAG00000020340	pus3	96	69.197	Scophthalmus_maximus
ENSSFOG00015004850	pus3	88	79.016	ENSSDUG00000020825	pus3	94	71.681	Seriola_dumerili
ENSSFOG00015004850	pus3	90	78.626	ENSSLDG00000019932	pus3	94	71.239	Seriola_lalandi_dorsalis
ENSSFOG00015004850	pus3	67	60.066	ENSSARG00000013826	PUS3	95	60.066	Sorex_araneus
ENSSFOG00015004850	pus3	91	55.814	ENSSPUG00000001412	PUS3	87	55.814	Sphenodon_punctatus
ENSSFOG00015004850	pus3	98	73.427	ENSSPAG00000019221	pus3	97	73.427	Stegastes_partitus
ENSSFOG00015004850	pus3	91	55.841	ENSSSCG00000015222	PUS3	88	55.841	Sus_scrofa
ENSSFOG00015004850	pus3	92	55.778	ENSTGUG00000000778	-	97	55.333	Taeniopygia_guttata
ENSSFOG00015004850	pus3	96	68.161	ENSTRUG00000013050	pus3	99	68.161	Takifugu_rubripes
ENSSFOG00015004850	pus3	86	66.501	ENSTNIG00000010307	pus3	97	66.501	Tetraodon_nigroviridis
ENSSFOG00015004850	pus3	99	65.625	ENSTNIG00000004929	PUS3	98	65.625	Tetraodon_nigroviridis
ENSSFOG00015004850	pus3	92	54.018	ENSTBEG00000004382	PUS3	92	55.841	Tupaia_belangeri
ENSSFOG00015004850	pus3	91	55.658	ENSTTRG00000012167	PUS3	88	55.658	Tursiops_truncatus
ENSSFOG00015004850	pus3	91	55.374	ENSUAMG00000009297	PUS3	88	55.374	Ursus_americanus
ENSSFOG00015004850	pus3	91	55.607	ENSUMAG00000001795	PUS3	88	55.607	Ursus_maritimus
ENSSFOG00015004850	pus3	91	56.265	ENSVPAG00000001495	PUS3	88	56.265	Vicugna_pacos
ENSSFOG00015004850	pus3	91	55.374	ENSVVUG00000020152	PUS3	88	55.374	Vulpes_vulpes
ENSSFOG00015004850	pus3	93	52.083	ENSXETG00000024532	pus3	81	52.083	Xenopus_tropicalis
ENSSFOG00015004850	pus3	72	78.233	ENSXMAG00000025659	PUS3	52	79.167	Xiphophorus_maculatus
ENSSFOG00015004850	pus3	73	77.259	ENSXMAG00000025077	pus3	75	77.259	Xiphophorus_maculatus
ENSSFOG00015004850	pus3	98	72.540	ENSXMAG00000028016	pus3	97	72.540	Xiphophorus_maculatus
ENSSFOG00015004850	pus3	73	77.019	ENSXMAG00000029934	pus3	75	77.019	Xiphophorus_maculatus
ENSSFOG00015004850	pus3	61	77.574	ENSXMAG00000025146	pus3	84	77.574	Xiphophorus_maculatus
ENSSFOG00015004850	pus3	61	77.574	ENSXMAG00000028945	pus3	91	77.574	Xiphophorus_maculatus