EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015004885 (Gene tree)
Gene ID: 108928141
Gene Symbol: -
Alias: -
Full Name: myosin light chain kinase%2C smooth muscle-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 15470 bases
Position: chrKV410884.1:3613952-3629421
Accession: 108928141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015007397	RIO1	PF01163.22	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015007508	-	3388	XM_018741924	ENSSFOP00015007397	709 (aa)	XP_018597440	-

Gene Model

Click here to download ENSSFOG00015004885's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04020	Calcium signaling pathway	KEGG
sfm04270	Vascular smooth muscle contraction	KEGG
sfm04371	Apelin signaling pathway	KEGG
sfm04510	Focal adhesion	KEGG
sfm04810	Regulation of actin cytoskeleton	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004885's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004885	-	95	63.411	ENSAPOG00000023231	mylk5	78	63.411	Acanthochromis_polyacanthus
ENSSFOG00015004885	-	93	63.142	ENSAPOG00000019520	-	76	63.142	Acanthochromis_polyacanthus
ENSSFOG00015004885	-	91	61.920	ENSACIG00000024477	-	78	61.920	Amphilophus_citrinellus
ENSSFOG00015004885	-	95	62.974	ENSAOCG00000014130	mylk5	83	63.415	Amphiprion_ocellaris
ENSSFOG00015004885	-	93	62.840	ENSAOCG00000024465	-	76	62.840	Amphiprion_ocellaris
ENSSFOG00015004885	-	95	63.265	ENSAPEG00000017851	mylk5	81	64.130	Amphiprion_percula
ENSSFOG00015004885	-	92	63.086	ENSAPEG00000014652	-	81	63.086	Amphiprion_percula
ENSSFOG00015004885	-	91	63.721	ENSATEG00000002426	mylk5	77	63.721	Anabas_testudineus
ENSSFOG00015004885	-	91	61.503	ENSACLG00000007583	-	79	61.503	Astatotilapia_calliptera
ENSSFOG00015004885	-	95	62.281	ENSACLG00000003301	mylk5	83	62.281	Astatotilapia_calliptera
ENSSFOG00015004885	-	93	58.894	ENSAMXG00000019493	-	93	58.754	Astyanax_mexicanus
ENSSFOG00015004885	-	92	60.693	ENSCSEG00000017281	mylk5	89	61.550	Cynoglossus_semilaevis
ENSSFOG00015004885	-	91	60.769	ENSCVAG00000022136	-	75	60.769	Cyprinodon_variegatus
ENSSFOG00015004885	-	96	61.087	ENSCVAG00000022813	mylk5	83	61.087	Cyprinodon_variegatus
ENSSFOG00015004885	-	95	60.819	ENSFHEG00000011638	-	84	60.819	Fundulus_heteroclitus
ENSSFOG00015004885	-	95	58.551	ENSFHEG00000010974	-	80	58.551	Fundulus_heteroclitus
ENSSFOG00015004885	-	96	60.610	ENSGAFG00000000269	mylk5	79	60.610	Gambusia_affinis
ENSSFOG00015004885	-	91	59.002	ENSGACG00000008527	mylk5	99	59.002	Gasterosteus_aculeatus
ENSSFOG00015004885	-	91	61.051	ENSHBUG00000016459	-	79	61.051	Haplochromis_burtoni
ENSSFOG00015004885	-	91	63.369	ENSHBUG00000002257	mylk5	77	63.369	Haplochromis_burtoni
ENSSFOG00015004885	-	99	56.276	ENSHCOG00000015710	-	94	56.276	Hippocampus_comes
ENSSFOG00015004885	-	95	60.530	ENSIPUG00000012659	mylk5	81	60.611	Ictalurus_punctatus
ENSSFOG00015004885	-	99	60.784	ENSKMAG00000019605	mylk5	83	60.784	Kryptolebias_marmoratus
ENSSFOG00015004885	-	93	58.850	ENSKMAG00000016742	-	77	58.850	Kryptolebias_marmoratus
ENSSFOG00015004885	-	91	64.516	ENSLBEG00000004115	-	78	64.516	Labrus_bergylta
ENSSFOG00015004885	-	92	64.145	ENSLBEG00000003526	mylk5	80	63.902	Labrus_bergylta
ENSSFOG00015004885	-	92	62.745	ENSMAMG00000000610	mylk5	77	61.920	Mastacembelus_armatus
ENSSFOG00015004885	-	95	62.281	ENSMZEG00005022663	mylk5	78	63.524	Maylandia_zebra
ENSSFOG00015004885	-	91	61.335	ENSMMOG00000020584	mylk5	79	61.335	Mola_mola
ENSSFOG00015004885	-	95	61.144	ENSMALG00000004945	mylk5	79	61.144	Monopterus_albus
ENSSFOG00015004885	-	95	60.735	ENSMALG00000022416	-	76	61.201	Monopterus_albus
ENSSFOG00015004885	-	64	67.615	ENSONIG00000019875	-	98	67.615	Oreochromis_niloticus
ENSSFOG00015004885	-	91	60.961	ENSONIG00000016230	-	77	60.961	Oreochromis_niloticus
ENSSFOG00015004885	-	90	63.110	ENSONIG00000001203	mylk5	98	67.615	Oreochromis_niloticus
ENSSFOG00015004885	-	91	60.423	ENSPFOG00000013597	mylk5	77	60.423	Poecilia_formosa
ENSSFOG00015004885	-	91	61.491	ENSPLAG00000023779	mylk5	77	61.491	Poecilia_latipinna
ENSSFOG00015004885	-	96	60.234	ENSPMEG00000023897	mylk5	79	59.854	Poecilia_mexicana
ENSSFOG00015004885	-	91	59.538	ENSPREG00000003222	-	75	59.538	Poecilia_reticulata
ENSSFOG00015004885	-	84	61.770	ENSPREG00000009707	mylk5	83	61.770	Poecilia_reticulata
ENSSFOG00015004885	-	91	61.920	ENSPNYG00000010046	mylk5	75	61.920	Pundamilia_nyererei
ENSSFOG00015004885	-	91	61.610	ENSPNYG00000019509	-	82	73.592	Pundamilia_nyererei
ENSSFOG00015004885	-	91	63.231	ENSSMAG00000020328	-	77	63.231	Scophthalmus_maximus
ENSSFOG00015004885	-	96	60.000	ENSSMAG00000006784	mylk5	79	60.000	Scophthalmus_maximus
ENSSFOG00015004885	-	92	63.843	ENSSDUG00000020847	-	78	63.843	Seriola_dumerili
ENSSFOG00015004885	-	92	63.843	ENSSLDG00000019897	-	78	63.843	Seriola_lalandi_dorsalis
ENSSFOG00015004885	-	82	64.786	ENSSPAG00000019068	-	72	64.786	Stegastes_partitus
ENSSFOG00015004885	-	92	63.166	ENSSPAG00000020815	mylk5	82	63.166	Stegastes_partitus
ENSSFOG00015004885	-	92	60.725	ENSTRUG00000015150	mylk5	76	60.725	Takifugu_rubripes
ENSSFOG00015004885	-	83	60.496	ENSTNIG00000011699	mylk5	99	60.496	Tetraodon_nigroviridis
ENSSFOG00015004885	-	58	62.529	ENSTNIG00000004928	-	99	62.529	Tetraodon_nigroviridis
ENSSFOG00015004885	-	91	57.846	ENSXCOG00000005927	-	85	71.536	Xiphophorus_couchianus
ENSSFOG00015004885	-	96	60.699	ENSXMAG00000007789	mylk5	79	60.699	Xiphophorus_maculatus
ENSSFOG00015004885	-	75	62.547	ENSXMAG00000015589	-	67	62.547	Xiphophorus_maculatus